Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167827.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_10, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24162007

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   

This is table  6  of  131  ( 15626 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1244811--1244852
22
2.0
22
90
4
68
54
4
7
33
1.49
1257931--1257973
4
10.8
4
84
0
50
55
18
0
25
1.42
1257955--1257989
2
17.5
2
87
0
52
51
5
0
42
1.25
1258537--1258708
84
2.0
84
88
2
256
20
26
20
33
1.97
1263110--1263164
23
2.4
23
96
0
101
58
14
20
7
1.60
1263623--1263674
11
5.0
10
81
4
50
48
0
1
50
1.12
1263752--1263816
33
1.9
35
90
6
107
50
0
0
49
1.00
1263752--1263806
13
4.6
13
76
23
59
49
0
0
50
1.00
1267512--1267581
22
3.2
22
80
6
72
52
15
0
31
1.43
1267531--1267591
32
2.0
30
87
6
86
49
18
0
32
1.48
1267821--1267860
14
3.1
14
79
17
50
50
10
0
40
1.36
1267868--1267916
22
2.2
22
100
0
98
34
14
4
46
1.63
1267923--1267954
15
2.1
15
94
0
55
21
21
0
56
1.43
1267947--1268024
38
2.1
38
82
0
93
32
37
15
15
1.89
1272348--1272394
24
2.0
24
82
0
58
27
4
4
63
1.31
1279423--1279463
19
2.0
21
90
9
68
43
4
0
51
1.23
1280143--1280192
23
2.1
24
85
10
68
38
0
0
62
0.96
1280156--1280200
16
2.9
15
81
18
56
42
0
0
57
0.98
1291352--1291395
22
2.0
23
86
4
63
36
0
2
61
1.09
1291979--1292042
25
2.5
26
72
20
62
39
3
0
57
1.14
1297377--1297451
3
25.0
3
78
10
64
66
2
4
26
1.22
1297369--1297447
30
2.9
27
77
9
79
68
2
6
22
1.25
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1297853--1297885
14
2.3
15
89
5
50
51
3
0
45
1.16
1297875--1297911
6
6.3
6
87
12
51
64
0
0
35
0.94
1297875--1297911
17
2.1
18
85
14
51
64
0
0
35
0.94
1303597--1303621
12
2.1
12
100
0
50
84
0
0
16
0.63
1304123--1304178
4
13.8
4
81
10
69
25
1
3
69
1.14
1304558--1304605
18
2.7
17
84
12
53
54
2
2
41
1.24
1308626--1308670
15
3.1
15
77
3
56
28
0
0
71
0.87
1309829--1309877
21
2.4
19
83
10
53
24
6
2
67
1.24
1311074--1311126
24
2.2
25
83
10
65
69
1
15
13
1.27
1311408--1311475
25
2.7
24
82
15
75
75
0
13
11
1.06
1313248--1313499
18
13.9
19
74
14
115
29
11
11
47
1.75
1314685--1314723
16
2.4
16
82
0
51
28
2
5
64
1.28
1314970--1315011
18
2.3
18
80
8
50
54
0
0
45
0.99
1321042--1321078
12
3.1
12
96
0
65
24
21
8
45
1.78
1338928--1338966
2
19.5
2
83
0
51
41
0
7
51
1.31
1342277--1342305
2
14.5
2
100
0
58
48
0
0
51
1.00
1343771--1343808
18
2.2
18
86
13
53
31
13
5
50
1.63
1345839--1345881
14
2.9
14
80
16
50
27
0
4
67
1.10
1345841--1345886
23
2.0
24
91
4
76
30
0
6
63
1.20
1346007--1346063
23
2.5
23
82
5
62
54
3
0
42
1.17
1347825--1347868
3
14.7
3
100
0
88
31
0
0
68
0.90
1349673--1349747
31
2.5
30
81
10
91
44
5
1
49
1.33
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1352159--1352187
2
15.0
2
92
7
51
48
0
0
51
1.00
1352308--1352340
17
1.9
17
93
0
57
48
6
0
45
1.27
1352755--1352779
12
2.1
12
100
0
50
60
0
0
40
0.97
1354466--1354493
3
9.3
3
100
0
56
67
0
0
32
0.91
1360455--1360488
16
2.2
16
89
5
52
29
0
0
70
0.87
1360516--1360577
29
2.1
29
82
5
72
50
3
0
46
1.17
1361804--1361843
21
1.9
21
90
10
64
37
7
2
52
1.43
1365946--1365995
21
2.4
21
100
0
100
38
8
6
48
1.57
1367386--1367439
24
2.2
25
83
3
65
40
5
3
50
1.44
1369875--1369901
10
2.7
10
100
0
54
0
29
51
18
1.46
1374562--1374612
22
2.3
22
90
6
77
49
0
0
50
1.00
1374620--1374680
24
2.5
23
76
7
59
31
0
3
65
1.09
1376566--1377102
181
3.0
181
91
1
835
27
11
20
39
1.88
1384450--1384475
13
2.0
13
100
0
52
53
7
23
15
1.67
1385869--1385894
3
8.7
3
100
0
52
69
0
0
30
0.89
1386745--1386801
30
2.0
30
82
6
73
31
1
7
59
1.34
1391089--1391119
11
2.8
11
95
0
53
6
29
22
41
1.78
1392323--1392382
9
7.0
9
73
17
56
35
0
0
65
0.93
1392297--1392391
33
2.7
34
81
12
97
40
0
0
60
0.97
1401569--1401614
20
2.3
20
92
0
74
30
10
10
47
1.73
1401823--1401890
21
3.1
23
77
8
70
52
1
1
44
1.19
1406232--1406272
18
2.3
18
95
0
73
36
4
4
53
1.44
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1422377--1422473
49
2.0
49
91
0
158
29
11
14
44
1.80
1425645--1425706
23
2.6
25
80
14
69
33
1
0
64
1.03
1425752--1425783
16
2.0
16
93
0
55
56
0
3
40
1.15
1428273--1428297
5
5.0
5
100
0
50
20
0
0
80
0.72
1435853--1435880
6
4.7
6
100
0
56
28
35
17
17
1.93
1437358--1437387
10
3.1
10
95
4
53
36
0
0
63
0.95
1437360--1437389
9
3.2
9
95
4
51
36
0
0
63
0.95
1437539--1437585
6
7.8
6
81
13
53
55
0
0
44
0.99
1437535--1437587
12
4.4
12
84
15
74
58
0
0
41
0.98
1437551--1437587
7
5.6
7
87
12
60
59
0
0
40
0.97
1445824--1445880
24
2.4
24
82
5
62
15
26
33
24
1.95
1463483--1463526
22
2.0
22
81
0
52
63
2
2
31
1.19
1465172--1465474
101
3.0
101
94
1
524
30
21
19
28
1.98
1470381--1470463
33
2.5
32
79
12
96
49
6
1
43
1.35
1471053--1471162
55
2.0
57
82
7
136
44
0
0
53
1.13
1479938--1479963
13
2.0
13
100
0
52
61
15
15
7
1.55
1484374--1484407
7
4.9
7
89
10
52
17
0
0
82
0.67
1487646--1487704
30
1.9
31
86
13
86
47
1
1
49
1.21
1489551--1489610
28
2.0
29
84
12
77
16
18
13
51
1.76
1492091--1492450
182
2.0
183
92
1
607
26
24
21
26
1.99
1495805--1496099
148
2.0
148
100
0
590
33
17
8
39
1.81
1499006--1499067
30
2.1
30
96
0
115
46
25
9
17
1.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1501278--1501319
18
2.4
18
84
4
50
35
4
0
59
1.19
1502558--1502589
15
2.1
15
100
0
64
62
0
0
37
0.95
1502579--1502627
15
3.3
15
81
10
57
63
2
4
30
1.24
1502587--1502622
16
2.3
16
90
4
56
66
2
5
25
1.27
1504728--1504799
25
2.9
24
76
15
74
51
0
2
45
1.15
1504812--1504853
20
2.1
20
90
0
66
47
16
9
26
1.77
1505032--1505083
26
2.0
26
88
0
77
34
0
1
63
1.06
1505583--1505643
21
2.8
21
80
7
59
55
0
0
44
0.99
1514374--1514420
2
23.5
2
100
0
94
0
48
0
51
1.00
1516029--1516073
6
7.5
6
82
0
54
48
0
2
48
1.13
1516029--1516073
4
11.2
4
80
0
54
48
0
2
48
1.13
1536696--1536764
33
2.1
32
86
7
95
39
4
2
53
1.36
1537342--1537366
2
12.5
2
100
0
50
0
48
0
52
1.00
1537380--1537410
2
15.5
2
93
0
53
48
0
3
48
1.17
1538688--1538739
26
2.0
26
88
0
77
48
11
5
34
1.63
1538696--1538750
26
2.1
26
83
6
67
45
12
9
32
1.74
1538836--1538874
17
2.4
17
86
4
53
25
7
7
58
1.52
1540305--1540347
21
2.0
22
86
4
61
58
0
2
39
1.11
1540909--1540951
15
2.8
16
86
13
63
53
0
4
41
1.21
1546463--1546505
11
3.8
11
85
14
61
74
2
0
23
0.93
1546465--1546517
24
2.3
23
84
12
72
73
1
0
24
0.93
1550431--1550459
7
4.1
7
100
0
58
44
0
27
27
1.54
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1556016--1556045
2
15.0
2
100
0
60
50
0
0
50
1.00
1556473--1556511
17
2.4
17
91
4
62
71
0
23
5
1.05
1556908--1556975
26
2.6
25
80
13
75
72
1
2
23
1.07
1556921--1556982
20
3.0
20
73
21
56
70
1
3
24
1.10
1559531--1559880
172
2.0
172
93
0
601
42
12
7
37
1.71
1561181--1561214
16
2.1
16
89
10
52
61
0
8
29
1.26
1561188--1561257
24
3.0
23
79
6
70
65
1
4
28
1.20
1561234--1561275
21
2.0
21
85
0
57
66
2
0
30
1.04
1561843--1561891
21
2.4
21
93
3
82
51
0
0
48
1.00
1561879--1561929
16
3.2
16
80
0
57
64
0
0
35
0.94

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131