Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167827.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_10, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24162007

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   

This is table  7  of  131  ( 15626 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1561864--1561920
30
1.9
30
85
0
78
54
0
0
45
0.99
1565327--1565353
2
13.5
2
100
0
54
51
48
0
0
1.00
1572836--1572864
2
14.5
2
100
0
58
51
0
0
48
1.00
1573641--1573665
4
6.2
4
100
0
50
76
0
0
24
0.80
1576638--1576676
18
2.3
17
86
8
53
41
10
0
48
1.37
1581502--1581550
22
2.4
22
90
10
77
51
0
0
48
1.00
1581540--1581624
24
3.5
24
71
10
73
51
0
0
48
1.00
1581579--1581607
11
2.7
11
94
5
51
58
0
0
41
0.98
1583414--1583458
21
2.1
21
87
0
63
53
0
2
44
1.13
1585772--1585869
47
2.1
47
96
0
178
41
26
17
14
1.87
1591637--1591734
50
1.9
52
85
4
137
27
9
5
58
1.50
1592602--1592757
50
3.1
50
75
14
153
27
10
4
57
1.51
1590781--1592753
978
2.0
981
91
2
3203
38
10
9
41
1.72
1592832--1592884
26
2.0
26
85
3
70
39
11
5
43
1.64
1593036--1593090
25
2.2
26
87
9
78
40
5
3
50
1.43
1592774--1593126
186
1.9
187
79
5
401
36
7
5
49
1.57
1594096--1594124
10
3.0
10
95
5
51
10
6
0
82
0.83
1594102--1594134
16
2.0
17
88
5
50
12
6
0
81
0.85
1594130--1594329
42
4.7
42
76
10
176
45
17
11
26
1.82
1594154--1594329
83
2.1
83
79
8
189
43
17
12
26
1.84
1594262--1594358
42
2.3
41
87
5
133
46
18
12
22
1.82
1594571--1594636
21
3.1
21
80
2
69
46
15
3
34
1.61
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1594767--1594905
66
2.1
66
87
0
197
36
15
10
38
1.81
1595005--1595285
21
12.2
23
68
17
122
39
13
8
39
1.75
1595005--1595285
46
6.1
46
71
9
214
39
13
8
39
1.75
1595792--1596027
79
3.0
79
87
0
337
28
24
10
36
1.88
1596637--1596669
8
4.1
8
92
0
57
12
3
0
84
0.72
1600469--1600596
53
2.4
54
80
8
154
27
10
8
53
1.63
1600472--1600596
54
2.3
53
86
2
169
28
9
8
53
1.63
1600839--1600865
10
2.7
10
100
0
54
40
11
0
48
1.39
1604091--1604121
16
1.9
16
93
0
53
6
29
0
64
1.18
1606508--1606574
24
2.8
24
77
15
66
61
0
0
38
0.96
1621869--1621895
7
3.9
7
100
0
54
25
0
0
74
0.83
1622028--1622130
5
22.2
5
69
23
57
56
0
0
43
0.99
1622034--1622166
19
6.6
20
70
22
89
54
0
0
45
0.99
1622102--1622169
24
2.9
24
82
2
84
55
0
0
44
0.99
1622028--1622168
61
2.3
62
84
9
175
55
0
0
44
0.99
1632690--1632868
91
2.0
92
93
1
306
27
17
32
21
1.96
1636113--1636164
26
2.0
26
96
0
95
53
17
0
28
1.44
1639160--1639201
6
6.8
6
97
2
75
35
0
0
64
0.94
1640332--1640398
26
2.6
25
84
9
82
32
0
2
64
1.09
1640448--1640513
36
1.9
35
82
14
84
13
7
4
74
1.20
1640837--1640874
19
2.0
19
89
0
58
28
10
21
39
1.86
1641348--1641412
11
6.4
10
82
12
53
13
4
1
80
0.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1641347--1641424
6
13.7
6
71
15
58
14
6
1
78
1.01
1641347--1641405
17
3.4
16
77
11
55
13
5
1
79
0.97
1641359--1641412
18
3.1
18
83
2
74
12
3
1
81
0.91
1641387--1641430
16
2.9
15
83
12
54
15
6
2
75
1.12
1641459--1641910
59
7.7
58
85
6
588
44
6
13
35
1.69
1652157--1652208
18
2.8
19
86
11
65
80
0
11
7
0.89
1652176--1652209
11
3.1
11
86
0
50
88
0
5
5
0.64
1653224--1653478
41
6.1
41
86
4
343
23
16
21
38
1.93
1653226--1653471
124
2.0
125
88
5
365
22
16
20
39
1.92
1653224--1653478
83
3.1
82
87
4
352
23
16
21
38
1.93
1653492--1653528
10
3.6
10
92
3
56
89
5
0
5
0.60
1653486--1653541
27
2.1
27
86
6
78
85
7
1
5
0.79
1653492--1653535
10
4.4
10
83
11
54
88
6
0
4
0.62
1653733--1653895
12
12.7
12
66
25
52
28
1
3
66
1.14
1653736--1653875
4
33.5
4
72
17
81
29
1
3
65
1.18
1653736--1653889
60
2.5
58
77
16
152
29
1
3
66
1.15
1653843--1653886
22
2.0
23
95
4
81
34
0
0
65
0.93
1653815--1653888
27
2.7
27
80
15
82
31
0
2
66
1.06
1653740--1653883
22
5.7
26
64
29
55
29
1
3
65
1.18
1653935--1653999
33
1.9
34
84
9
89
20
7
3
69
1.27
1654397--1654426
11
2.7
11
94
0
51
26
33
16
23
1.96
1654870--1654945
11
7.4
10
78
15
50
14
5
1
78
0.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1654869--1654926
17
3.4
17
72
13
57
13
5
1
79
0.98
1654881--1654944
17
3.8
17
83
6
78
14
4
1
79
0.96
1654869--1654945
6
13.7
6
73
13
65
14
5
1
79
0.97
1654979--1655430
59
7.7
58
84
7
585
45
5
12
36
1.65
1654979--1655430
117
3.9
117
85
7
596
45
5
12
36
1.65
1655975--1656030
21
2.6
22
85
5
69
21
5
0
73
1.03
1655976--1656093
25
4.6
25
75
15
98
22
5
2
69
1.22
1655976--1656091
17
6.6
18
69
24
70
22
5
2
69
1.20
1655975--1656046
13
5.5
13
71
17
60
23
4
0
72
1.02
1656019--1656074
18
2.9
18
76
7
58
21
5
3
69
1.24
1655976--1656043
4
15.8
4
79
10
55
23
4
0
72
1.03
1655995--1656057
31
2.0
31
87
3
90
20
4
1
73
1.11
1657226--1657330
48
2.2
46
86
8
147
60
5
11
22
1.52
1662906--1663335
108
4.0
109
85
3
550
37
10
14
36
1.82
1664248--1664285
13
2.9
14
84
7
53
23
0
0
76
0.79
1664279--1664317
20
1.9
20
85
15
53
17
7
7
66
1.40
1666116--1666150
16
2.2
17
90
10
56
34
22
0
42
1.54
1676533--1676593
30
2.0
31
84
12
81
70
1
1
26
1.06
1676632--1676665
16
2.2
15
89
5
50
58
0
2
38
1.13
1676639--1676680
22
1.9
22
85
0
57
59
0
4
35
1.19
1685501--1685555
24
2.3
24
90
0
83
47
3
0
49
1.19
1691615--1691654
16
2.7
14
88
7
53
55
0
0
45
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1691582--1691630
21
2.4
21
89
3
73
48
0
0
51
1.00
1691620--1691660
8
5.1
8
87
0
64
58
0
0
41
0.98
1691620--1691668
24
2.0
24
88
0
71
61
0
0
38
0.96
1693920--1693944
1
25.0
1
100
0
50
100
0
0
0
0.00
1705650--1705678
2
14.5
2
100
0
58
48
0
0
51
1.00
1713746--1713785
2
20.0
2
89
0
62
45
2
2
50
1.28
1713930--1713965
2
17.5
2
94
5
63
50
2
0
47
1.15
1721846--1721880
16
2.1
16
89
5
52
68
2
0
28
1.04
1729538--1729583
23
2.0
23
100
0
92
4
21
21
52
1.64
1732497--1732544
16
3.0
16
96
0
87
50
25
14
10
1.74
1733343--1733399
29
2.0
29
82
6
71
40
26
7
26
1.81
1744682--1744724
22
2.0
22
85
0
59
51
0
0
48
1.00
1749460--1750118
329
2.0
329
100
0
1318
41
13
17
27
1.87
1755624--1755712
36
2.5
36
83
3
99
11
21
42
24
1.85
1755648--1755713
24
2.8
24
72
6
62
13
21
42
22
1.88
1756046--1756099
28
2.1
25
83
13
65
11
20
3
64
1.40
1759836--1759860
9
2.8
9
100
0
50
0
8
0
92
0.40
1759836--1759864
10
3.0
10
95
5
51
0
10
0
89
0.48
1760408--1760447
21
1.9
21
84
0
53
75
2
20
2
1.04
1760706--1760768
21
3.0
22
79
9
60
34
0
1
63
1.04
1760884--1760917
10
3.3
10
88
8
50
79
0
2
17
0.86
1761048--1761091
22
1.9
23
86
9
63
63
0
0
36
0.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1760890--1761318
202
2.1
197
77
12
420
48
7
9
33
1.64
1773212--1773661
48
9.6
48
80
9
471
30
10
18
40
1.85
1773266--1773681
140
3.0
139
85
2
566
30
11
18
40
1.85
1782708--1782789
40
2.0
40
90
0
128
43
3
13
39
1.61
1790631--1790672
23
2.0
21
81
13
50
38
4
2
54
1.34
1797478--1797532
26
2.2
24
84
9
67
21
0
18
60
1.37
1800099--1800143
20
2.3
20
92
3
74
37
15
11
35
1.83
1803052--1803144
32
3.1
29
71
22
75
59
0
0
40
0.98
1813700--1813739
4
10.0
4
88
0
62
30
0
0
70
0.88
1813680--1813754
12
5.2
16
72
27
62
33
0
0
66
0.92

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131