Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167827.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_10, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24162007

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   

This is table  44  of  131  ( 15626 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9263122--9263435
127
2.5
125
85
5
432
24
15
13
46
1.82
9263718--9263751
18
1.9
18
88
5
52
23
0
0
76
0.79
9264038--9264079
20
2.2
20
82
4
50
19
2
7
71
1.20
9264631--9264971
187
1.8
186
81
8
424
45
8
9
35
1.68
9265181--9265352
55
3.1
54
77
9
188
52
7
13
26
1.66
9265170--9265337
56
3.0
54
80
7
196
55
7
13
23
1.62
9265533--9265582
11
4.5
11
78
9
57
10
12
0
78
0.98
9265552--9265601
26
2.0
26
88
11
77
16
12
0
72
1.13
9265568--9265598
16
1.9
16
93
0
53
16
9
0
74
1.07
9269628--9269804
61
2.9
60
81
3
203
35
12
5
46
1.65
9269628--9269785
59
2.6
60
82
2
183
36
12
5
44
1.66
9269731--9269960
78
3.1
76
81
8
258
33
8
6
51
1.58
9274778--9274802
2
12.5
2
100
0
50
48
0
0
52
1.00
9277240--9277300
31
2.0
31
83
6
79
39
8
19
32
1.81
9280711--9280744
15
2.1
17
89
10
54
44
2
0
52
1.16
9281105--9281151
20
2.3
20
85
10
69
59
2
4
34
1.29
9283644--9283848
64
3.3
64
72
19
232
23
10
8
56
1.61
9283654--9283847
59
3.2
58
69
25
184
24
11
8
55
1.63
9283713--9283751
20
2.0
20
89
0
60
28
10
10
51
1.68
9283639--9283886
123
2.0
123
100
0
496
22
11
9
56
1.63
9283836--9283874
20
2.0
20
89
0
60
28
10
10
51
1.68
9287304--9287579
153
1.8
153
100
0
552
38
9
10
42
1.71
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9288827--9288888
20
3.0
20
81
13
65
29
11
6
53
1.61
9289178--9289220
21
2.0
21
86
4
59
27
6
13
51
1.67
9304604--9304654
26
2.0
26
88
7
77
5
11
21
60
1.52
9308172--9308230
31
1.9
30
82
3
73
32
3
1
62
1.21
9309680--9309704
7
3.6
7
100
0
50
88
0
0
12
0.53
9310888--9310977
43
2.1
43
83
6
112
60
7
10
22
1.54
9310836--9311158
161
2.0
162
98
0
621
59
6
9
25
1.52
9311049--9311138
43
2.1
42
84
10
112
58
8
10
22
1.57
9316679--9316756
16
4.8
16
71
17
63
71
1
15
11
1.20
9316678--9316756
25
3.2
24
82
10
97
72
1
15
11
1.19
9316679--9316756
8
9.7
7
79
16
57
71
1
15
11
1.20
9316649--9316765
16
6.9
16
69
18
53
72
2
11
12
1.22
9318008--9318038
14
2.2
14
100
0
62
38
6
12
41
1.69
9317992--9318077
38
2.4
36
80
7
93
40
5
15
38
1.71
9318668--9318972
130
2.3
131
81
5
359
28
13
12
44
1.81
9318668--9318973
87
3.5
87
80
2
355
28
13
13
44
1.81
9318668--9318962
43
6.8
43
80
3
286
28
14
12
45
1.80
9320294--9320498
49
4.3
49
79
6
206
60
5
8
24
1.47
9332667--9332703
18
2.1
18
89
0
56
59
0
0
40
0.97
9333540--9333587
24
2.0
24
83
4
60
50
0
4
45
1.21
9333711--9333787
35
2.2
34
80
13
84
67
0
1
31
0.99
9339511--9339562
21
2.5
22
93
6
90
48
0
0
51
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9340408--9340435
2
14.0
2
100
0
56
50
0
0
50
1.00
9341008--9341063
20
2.7
21
78
13
71
69
3
3
23
1.20
9341020--9341072
19
2.7
20
88
2
81
66
5
1
26
1.25
9341020--9341083
20
3.2
20
82
6
69
62
4
1
31
1.25
9341092--9341143
22
2.4
22
83
6
70
57
7
5
28
1.50
9341097--9341152
22
2.6
22
83
11
62
60
7
5
26
1.44
9341105--9341152
21
2.2
21
82
10
53
62
6
4
27
1.38
9341294--9341345
19
2.7
19
81
0
59
59
5
1
32
1.32
9341294--9341346
9
5.7
9
78
8
52
58
5
1
33
1.32
9341406--9341484
10
7.7
10
72
19
56
54
2
2
40
1.27
9341404--9341441
11
3.5
11
78
7
51
57
2
2
36
1.26
9341397--9341441
21
2.1
21
87
0
63
60
4
2
33
1.29
9341434--9341459
13
2.0
13
100
0
52
53
0
0
46
1.00
9342269--9342356
40
2.2
40
87
4
124
40
2
2
54
1.25
9342255--9342375
18
6.3
19
75
13
79
36
1
4
57
1.28
9342280--9342358
9
8.3
9
82
8
95
41
2
2
53
1.28
9342520--9342568
10
5.0
9
80
11
53
51
0
4
44
1.20
9342517--9342568
20
2.6
21
77
17
65
51
0
3
44
1.19
9357047--9357093
22
2.2
22
84
3
60
42
0
0
57
0.98
9357119--9357158
17
2.3
18
83
12
57
67
0
0
32
0.91
9362027--9362145
42
2.9
42
79
3
125
20
27
4
47
1.68
9363199--9363312
57
2.0
57
98
0
219
41
7
6
45
1.56
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9368298--9368346
25
2.0
25
88
8
73
18
6
2
73
1.14
9368864--9368901
19
2.0
20
89
5
60
23
10
0
65
1.23
9371020--9371064
18
2.6
17
86
6
56
11
4
4
80
1.01
9371020--9371064
8
5.4
8
87
10
54
11
4
4
80
1.01
9371867--9371901
17
1.9
19
88
11
56
40
8
5
45
1.58
9373382--9373432
15
3.4
15
77
0
66
39
31
13
15
1.87
9374236--9374267
15
2.0
17
88
11
50
56
0
34
9
1.32
9375006--9375143
52
2.7
51
80
9
149
39
5
5
50
1.47
9376445--9376494
3
16.7
3
78
0
55
64
26
2
8
1.32
9379857--9379890
12
2.8
12
90
4
50
14
2
2
79
0.97
9379958--9379993
9
4.0
9
96
0
63
33
8
0
58
1.28
9382202--9382248
22
2.2
22
84
3
60
42
0
0
57
0.98
9383956--9383988
14
2.4
14
90
10
50
66
6
9
18
1.40
9387224--9387350
42
3.0
41
77
2
110
21
29
2
47
1.63
9388357--9388470
57
2.0
57
100
0
228
38
7
8
45
1.62
9390316--9390357
17
2.4
18
80
11
52
14
4
16
64
1.45
9394030--9394067
19
2.0
20
89
5
60
23
10
0
65
1.23
9397245--9397286
22
2.0
22
90
4
68
71
4
2
21
1.16
9399395--9399426
15
2.0
17
88
11
50
56
0
34
9
1.32
9401598--9401700
6
17.3
6
74
8
68
64
23
0
11
1.33
9401598--9401700
9
11.6
9
73
9
68
64
23
0
11
1.33
9401620--9401693
21
3.5
21
77
0
76
60
25
0
13
1.33
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9402780--9402808
12
2.3
13
94
5
51
41
0
20
37
1.53
9404038--9404083
16
2.8
16
83
6
56
21
2
8
67
1.29
9404123--9404157
15
2.5
13
90
9
52
82
0
8
8
0.83
9404096--9404155
26
2.2
28
82
8
70
71
6
10
11
1.30
9405026--9405070
21
2.2
21
88
4
65
15
4
0
80
0.87
9405132--9405191
3
20.0
3
74
19
54
30
6
0
63
1.20
9405378--9405470
38
2.5
37
77
8
100
45
16
9
29
1.79
9409663--9409692
12
2.6
12
94
5
53
86
0
13
0
0.57
9411082--9411202
22
5.3
22
72
13
93
33
7
15
43
1.75
9411084--9411171
24
3.8
23
72
19
76
29
7
14
47
1.73
9411082--9411356
46
6.2
46
73
17
174
32
6
17
43
1.75
9413441--9413488
25
1.9
25
91
8
80
14
6
2
77
1.06
9413493--9413524
3
10.7
3
100
0
64
31
0
0
68
0.90
9417836--9417940
52
2.0
52
85
3
140
23
25
10
40
1.87
9417965--9417995
11
2.8
11
90
0
53
51
32
0
16
1.44
9418957--9419023
24
2.8
23
78
14
73
40
5
1
52
1.35
9423251--9423518
64
4.2
64
80
3
218
38
12
11
36
1.80
9424199--9424232
13
2.4
14
90
9
52
35
0
5
58
1.22
9427180--9427413
81
2.9
80
69
9
197
47
9
6
36
1.63
9427342--9428208
81
10.9
79
69
12
320
45
8
8
37
1.65
9427174--9428590
159
9.0
161
77
9
1145
45
9
8
37
1.66
9428077--9428351
146
1.9
145
85
3
383
47
10
7
35
1.65
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9428229--9428588
80
4.5
79
75
11
306
46
8
6
38
1.61
9428665--9428960
79
3.7
75
76
11
220
47
7
6
38
1.58
9428979--9429359
82
4.7
79
74
12
256
44
10
7
36
1.68
9428609--9429359
162
4.7
160
77
9
689
44
9
8
37
1.67
9431084--9432220
162
7.1
160
83
5
1216
44
9
7
38
1.64
9431084--9432220
80
14.2
78
70
12
458
44
9
7
38
1.64
9433638--9433670
17
1.9
17
100
0
66
48
12
0
39
1.40
9433884--9434239
80
4.4
80
70
10
233
43
8
8
39
1.66
9433882--9434239
162
2.2
162
85
2
468
43
8
8
39
1.66
9436347--9436405
11
5.0
12
79
10
52
79
0
13
6
0.92

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131