Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167827.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_10, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24162007

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   

This is table  15  of  131  ( 15626 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3807599--3807631
2
16.5
2
93
0
57
48
3
0
48
1.17
3821113--3821151
20
2.0
20
89
0
60
17
33
7
41
1.79
3826589--3826657
20
3.5
19
73
11
59
52
1
0
46
1.09
3830926--3831001
30
2.5
30
93
0
134
14
19
0
65
1.26
3834408--3834469
24
2.6
25
80
14
76
37
0
0
62
0.95
3834455--3834505
22
2.3
22
90
6
77
49
0
0
50
1.00
3838665--3838742
39
2.0
39
92
5
131
29
10
21
38
1.87
3841138--3841223
33
2.6
35
74
20
94
44
2
0
53
1.13
3844333--3844532
106
1.9
106
91
4
332
32
15
17
35
1.91
3849055--3849097
22
2.0
22
86
4
61
62
0
0
37
0.95
3854754--3854818
33
2.0
33
93
0
112
47
12
0
40
1.41
3854750--3854832
33
2.5
33
86
0
94
48
12
0
39
1.40
3854868--3854894
11
2.5
11
100
0
54
55
7
0
37
1.28
3859298--3859382
41
2.0
41
81
4
98
50
11
1
36
1.47
3860880--3861243
59
6.1
58
85
10
459
32
10
8
47
1.69
3861319--3861367
17
2.7
17
84
9
53
77
4
8
10
1.10
3861309--3861375
27
2.4
27
82
2
80
80
2
5
10
0.99
3861793--3861853
31
2.0
31
83
0
77
29
24
19
26
1.99
3861869--3861922
25
2.2
24
83
6
63
40
18
5
35
1.74
3862351--3862438
35
2.6
35
81
12
94
64
6
0
28
1.19
3863332--3863377
2
24.5
2
80
12
53
47
2
2
47
1.26
3877792--3877843
23
2.3
23
75
0
59
57
5
0
36
1.23
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3880613--3880678
25
2.7
23
76
9
60
59
1
0
39
1.07
3881212--3881279
20
3.2
22
72
14
63
58
0
0
41
0.98
3883057--3883090
16
2.1
16
88
0
50
47
2
0
50
1.16
3887330--3887385
12
4.4
12
77
18
60
33
0
0
66
0.92
3887326--3887377
14
3.9
14
80
12
65
34
0
0
65
0.93
3889745--3889797
3
17.7
3
100
0
106
67
0
0
32
0.91
3892998--3893024
14
1.9
14
100
0
54
59
7
3
29
1.42
3897108--3897155
25
1.9
25
83
8
62
25
4
6
64
1.35
3899131--3899169
16
2.2
17
86
13
53
61
5
0
33
1.18
3899138--3899169
16
1.9
17
93
6
57
68
3
0
28
1.04
3899157--3899493
58
5.7
58
83
7
396
44
7
12
35
1.70
3899158--3899493
116
2.9
116
87
5
471
44
7
12
35
1.70
3899158--3899493
174
1.9
176
84
7
459
44
7
12
35
1.70
3903199--3903278
30
2.8
27
80
12
88
71
0
20
8
1.12
3903234--3903276
10
4.6
9
82
8
50
81
0
11
6
0.87
3903204--3903277
19
3.8
19
76
13
71
74
0
17
8
1.05
3903499--3903523
11
2.3
11
100
0
50
36
36
8
20
1.82
3903975--3904098
63
2.0
63
90
0
194
36
9
24
29
1.87
3905134--3905533
42
9.5
42
81
5
309
24
14
20
40
1.90
3905273--3905533
42
6.1
42
89
2
317
24
16
19
39
1.91
3907840--3907876
16
2.4
15
86
8
56
16
2
5
75
1.10
3907923--3908063
62
2.3
62
87
6
198
51
4
8
36
1.52
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3908067--3908242
58
3.0
58
84
4
239
42
8
12
36
1.73
3909706--3909785
39
2.1
38
90
2
124
32
11
3
52
1.55
3911609--3911641
3
11.3
3
87
6
50
66
3
0
30
1.06
3912223--3912610
58
6.6
58
77
6
357
37
12
6
43
1.70
3912223--3912611
119
3.3
118
89
2
548
37
12
6
43
1.70
3912636--3912713
6
13.5
6
75
16
67
78
1
5
15
0.99
3912636--3912713
12
6.8
11
77
11
77
78
1
5
15
0.99
3912729--3912760
3
10.3
3
93
6
55
65
0
0
34
0.93
3913216--3913281
31
2.1
31
82
2
78
45
18
13
22
1.84
3913792--3913880
11
7.8
11
70
21
51
74
1
2
22
1.00
3913800--3913894
27
3.6
25
75
14
77
74
3
2
20
1.05
3913796--3913878
39
2.0
42
84
11
111
75
1
2
20
0.98
3913800--3913898
6
15.5
6
79
14
85
75
3
2
19
1.03
3913796--3913899
7
15.4
7
74
14
53
75
2
1
19
1.02
3913851--3913906
20
2.8
20
81
5
60
78
3
1
16
0.97
3914078--3914456
43
9.0
42
75
10
256
38
18
16
26
1.92
3914053--3914305
130
2.0
128
91
1
407
36
16
16
30
1.91
3914203--3914430
43
5.5
41
84
6
289
38
21
16
23
1.93
3914203--3914456
43
6.1
41
83
5
278
38
20
16
24
1.93
3914202--3914456
82
3.1
82
80
7
282
38
20
16
24
1.93
3915453--3915511
18
3.4
16
84
13
64
16
5
0
77
0.93
3915454--3915512
19
3.3
18
81
15
61
15
5
0
79
0.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3915472--3915514
9
4.7
9
85
5
59
13
2
0
83
0.74
3915465--3915513
19
2.8
17
87
9
64
14
2
0
83
0.73
3925872--3926323
58
7.7
58
79
8
443
36
13
6
43
1.71
3925874--3926322
115
3.8
115
82
6
528
36
13
6
43
1.70
3926339--3926436
5
18.8
5
72
19
60
76
1
6
16
1.04
3926339--3926437
6
15.7
6
70
20
51
76
1
6
16
1.03
3926363--3926425
21
3.0
21
81
11
76
76
0
7
15
1.01
3926339--3926439
26
3.7
25
78
17
96
77
0
5
15
1.02
3926334--3926440
32
3.3
31
76
13
99
75
0
6
16
1.06
3927347--3927430
21
3.9
23
68
13
63
58
5
4
30
1.43
3927514--3927556
15
2.9
15
86
6
61
72
2
2
23
1.08
3927524--3927628
26
4.1
25
73
16
74
73
2
1
21
1.06
3927552--3927625
19
3.8
17
77
19
58
72
2
1
22
1.04
3927546--3927628
20
4.4
18
77
10
78
74
2
1
21
1.00
3927584--3927627
12
3.6
12
84
6
61
75
4
0
20
0.98
3927517--3927634
25
4.6
25
76
10
105
73
2
1
22
1.04
3932186--3932230
2
22.5
2
81
0
54
40
0
8
51
1.33
3933938--3933971
15
2.3
15
89
0
50
64
0
0
35
0.94
3944125--3944172
19
2.5
18
77
12
51
50
6
2
41
1.39
3944461--3944534
37
2.0
37
94
0
130
50
1
2
45
1.24
3944777--3944860
40
2.2
38
78
8
89
35
8
8
47
1.64
3944871--3944922
26
2.0
25
82
10
61
42
5
1
50
1.37
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3944733--3944994
110
2.4
110
81
8
293
36
6
7
49
1.56
3945130--3945179
24
2.0
25
84
7
66
52
0
0
48
1.00
3947321--3947369
7
6.4
7
80
15
53
20
2
0
77
0.87
3947338--3947376
17
2.2
18
95
4
71
28
0
0
71
0.86
3947322--3947399
12
6.4
12
72
18
54
25
2
1
70
1.07
3948808--3948857
25
2.0
25
96
0
91
26
24
8
42
1.82
3956235--3956270
12
3.0
12
95
0
63
33
11
33
22
1.89
3956349--3956375
3
9.0
3
100
0
54
66
0
33
0
0.92
3957649--3957685
18
2.1
18
89
0
56
54
5
0
40
1.24
3957777--3957822
25
1.9
25
86
8
69
50
0
0
50
1.00
3959784--3959821
12
3.2
12
81
7
51
39
0
0
60
0.97
3959888--3959962
33
2.3
32
78
10
82
40
0
1
58
1.06
3959967--3960008
18
2.3
19
91
4
68
61
0
2
35
1.09
3960460--3960489
13
2.3
13
100
0
60
50
6
0
43
1.28
3969927--3969968
16
2.5
17
84
7
50
42
7
0
50
1.30
3970497--3970542
15
3.1
15
81
6
67
54
0
0
45
0.99
3970497--3970568
15
4.9
14
76
10
56
55
0
0
44
0.99
3970497--3970564
29
2.3
29
87
7
93
54
0
0
45
0.99
3972533--3972557
6
4.2
6
100
0
50
16
32
16
36
1.90
3979784--3979897
59
1.9
58
91
1
183
41
12
20
26
1.87
3987555--3987878
166
2.0
165
88
3
481
44
8
8
39
1.65
3987823--3987952
61
2.1
61
83
4
156
45
14
6
33
1.72
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3988436--3988728
161
1.8
161
82
4
376
43
6
7
42
1.57
3990174--3990265
27
3.2
27
64
16
67
36
13
4
45
1.63
3990114--3990391
118
2.3
118
90
4
427
35
12
7
44
1.70
3990116--3990391
59
4.7
57
83
8
338
35
12
6
44
1.69
3990421--3990485
17
4.0
16
73
16
62
75
3
7
13
1.14
3990409--3990484
5
14.8
5
72
20
59
77
2
5
14
1.05
3990408--3990477
31
2.3
31
87
7
99
77
2
5
14
1.07
3990409--3990484
11
6.8
11
75
14
59
77
2
5
14
1.05
3990507--3990546
4
10.0
4
86
10
55
77
2
0
20
0.88
3991375--3991459
20
4.0
21
72
25
63
69
5
4
20
1.28

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131