Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167827.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_10, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24162007

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   

This is table  107  of  131  ( 15626 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19085552--19085621
36
2.0
35
91
2
113
34
0
2
62
1.10
19087614--19087663
20
2.5
20
83
6
57
44
14
10
32
1.78
19088804--19088843
20
2.0
20
90
5
62
67
5
5
22
1.30
19089734--19089765
2
16.0
2
93
0
55
46
0
3
50
1.17
19097324--19097366
22
2.0
22
95
0
77
32
11
11
44
1.77
19101343--19101386
22
2.0
22
90
0
70
43
9
4
43
1.56
19101870--19101916
25
1.9
24
86
4
67
53
25
10
10
1.68
19110511--19110571
22
2.7
23
78
19
65
42
3
1
52
1.27
19110586--19110648
20
2.8
20
74
21
54
52
0
0
47
1.00
19111085--19111123
17
2.2
18
86
13
55
30
2
0
66
1.05
19111092--19111156
29
2.2
30
84
10
82
35
4
0
60
1.18
19111173--19111204
15
2.1
16
88
11
50
25
9
0
65
1.22
19120264--19120412
23
6.4
23
73
21
82
30
0
4
65
1.16
19120268--19120412
16
9.8
15
70
18
65
30
0
3
65
1.14
19120265--19120466
3
66.3
3
67
23
54
29
0
3
65
1.15
19120327--19120399
4
17.5
4
72
17
51
30
0
2
67
1.05
19120369--19120471
19
5.4
19
68
26
58
30
0
1
66
1.08
19120825--19120873
25
2.0
23
88
7
71
34
6
16
42
1.73
19121458--19121551
6
16.8
6
69
16
51
11
6
2
79
0.99
19121475--19121553
10
7.3
10
77
18
63
10
5
2
82
0.92
19121459--19121540
39
2.1
38
82
13
96
12
7
2
78
1.06
19121476--19121550
27
2.7
27
84
10
98
10
5
2
81
0.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19121455--19121552
17
5.5
17
73
21
76
12
6
2
79
0.99
19121561--19122191
59
10.7
59
80
12
647
46
6
12
34
1.67
19126112--19126159
24
2.0
25
87
4
71
75
0
16
8
1.04
19126112--19126186
22
3.5
22
72
22
61
76
0
16
8
1.02
19126139--19126171
10
3.4
10
83
8
50
87
0
12
0
0.53
19126117--19126206
16
6.1
15
75
23
52
75
0
16
7
1.02
19126113--19126202
38
2.5
35
75
15
85
75
0
15
8
1.03
19127470--19127552
43
1.9
44
85
9
118
38
10
15
34
1.83
19127606--19127636
16
1.9
16
100
0
62
19
12
32
35
1.90
19127808--19128145
41
8.1
41
90
2
505
23
17
23
35
1.95
19127808--19128145
83
4.1
83
90
2
509
23
17
23
35
1.95
19128153--19128240
1
88.0
1
77
0
86
88
10
0
1
0.56
19128153--19128233
10
8.4
10
86
10
116
88
9
0
1
0.56
19128404--19128564
3
52.3
3
72
20
63
29
0
3
66
1.11
19128404--19128564
22
7.2
22
69
22
88
29
0
3
66
1.11
19128472--19128544
4
17.5
4
74
16
51
27
0
2
69
1.02
19129600--19129653
27
2.0
28
85
10
76
12
5
1
79
0.98
19129586--19129689
52
2.1
48
82
10
120
15
4
0
78
0.96
19129598--19129687
16
5.4
16
73
17
69
12
5
1
81
0.92
19129616--19129689
33
2.2
35
90
4
116
12
4
1
82
0.87
19129586--19129688
25
4.1
23
76
15
89
14
4
0
79
0.94
19129706--19130203
59
8.5
57
77
13
424
46
6
12
34
1.68
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19131767--19131891
63
2.0
65
82
6
157
40
10
12
36
1.77
19131759--19132076
156
2.0
156
99
0
627
37
8
15
38
1.78
19131990--19132127
65
2.1
66
81
5
156
36
10
13
39
1.78
19132132--19132320
62
3.1
61
81
4
209
42
10
11
35
1.75
19133725--19133793
35
2.0
35
85
0
93
21
4
33
40
1.73
19134655--19134681
2
13.5
2
100
0
54
51
0
0
48
1.00
19137479--19137549
15
4.2
16
75
13
54
49
1
1
47
1.18
19137672--19137730
22
2.5
24
81
10
70
52
1
1
44
1.21
19137706--19137774
28
2.4
30
81
11
83
53
1
4
40
1.30
19137941--19137991
26
2.0
26
84
0
66
50
9
9
29
1.67
19137981--19138026
24
1.9
24
100
0
92
39
13
17
30
1.87
19141374--19141613
120
2.0
119
92
0
399
36
8
11
43
1.71
19142533--19142561
2
15.0
2
92
7
51
48
0
0
51
1.00
19143785--19143825
3
13.7
3
100
0
82
31
0
0
68
0.90
19145425--19145477
3
17.7
3
100
0
106
67
0
0
32
0.91
19151623--19151656
3
11.3
3
93
0
59
35
0
0
64
0.94
19151655--19151689
3
11.7
3
87
0
52
31
34
2
31
1.73
19153041--19153112
36
2.0
35
89
2
108
13
12
19
54
1.71
19153506--19153534
10
2.9
10
100
0
58
51
0
0
48
1.00
19155465--19155513
8
5.6
8
79
15
53
79
0
20
0
0.73
19155465--19155513
9
5.6
9
80
2
55
79
0
20
0
0.73
19155465--19155513
22
2.2
22
82
7
55
79
0
20
0
0.73
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19156008--19156065
16
3.9
15
78
17
50
70
0
27
1
0.97
19156028--19156111
24
3.5
22
75
15
78
76
1
17
4
1.03
19158109--19158202
39
2.4
39
90
0
143
36
10
15
37
1.83
19158503--19158536
14
2.6
13
86
13
52
88
0
5
5
0.64
19158493--19158550
12
4.6
12
79
16
55
81
3
10
5
0.97
19160739--19160763
6
4.2
6
100
0
50
52
16
16
16
1.76
19160776--19160819
19
2.2
20
88
4
63
15
0
38
45
1.47
19160831--19160868
18
2.1
18
85
9
51
13
2
39
44
1.57
19160860--19160944
24
3.4
24
75
4
71
20
1
30
48
1.57
19160933--19160970
12
3.2
12
88
0
58
7
0
39
52
1.31
19160947--19161002
28
2.0
29
92
3
96
12
0
42
44
1.42
19168085--19168113
13
2.1
14
93
6
51
27
0
0
72
0.85
19168164--19168201
11
3.5
11
86
13
51
50
2
0
47
1.15
19169059--19169096
16
2.3
17
81
4
51
73
5
7
13
1.22
19169417--19169470
28
1.9
28
81
7
65
66
1
0
31
1.02
19169656--19169704
12
4.2
12
75
17
50
22
2
2
73
1.04
19170577--19170618
8
5.2
8
77
11
50
80
4
0
14
0.86
19170780--19170810
2
15.5
2
100
0
62
51
0
0
48
1.00
19170995--19171024
12
2.5
12
88
0
51
66
13
3
16
1.37
19171140--19171164
12
2.1
12
100
0
50
32
0
0
68
0.90
19170378--19171226
441
1.9
442
84
5
1144
45
11
6
37
1.65
19172845--19172974
29
4.7
28
77
18
130
54
0
0
43
1.11
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19172861--19172988
36
3.7
35
78
12
147
56
0
0
42
1.10
19172867--19173000
68
2.0
68
84
8
175
56
1
1
40
1.17
19173079--19173118
16
2.6
15
84
7
53
47
2
0
50
1.14
19173105--19173151
17
2.7
18
77
12
53
44
2
2
51
1.25
19173585--19173637
22
2.4
21
84
9
70
45
11
20
22
1.83
19175106--19175151
18
2.5
19
79
13
51
23
8
2
65
1.32
19176997--19177055
3
19.7
3
100
0
118
32
0
0
67
0.91
19177481--19177536
26
2.2
26
80
6
60
46
5
14
33
1.67
19178054--19178225
61
2.8
61
79
6
159
39
4
13
41
1.66
19177171--19178484
654
2.0
654
88
4
1981
38
5
13
41
1.69
19182038--19182247
44
4.8
43
78
6
183
44
15
14
25
1.85
19182049--19182250
88
2.3
87
82
6
248
43
14
14
27
1.84
19182357--19182530
3
61.7
3
79
12
172
33
2
2
60
1.24
19182388--19182529
28
5.0
28
80
15
111
35
2
2
60
1.20
19183195--19183238
20
2.3
19
85
14
63
18
0
4
77
0.94
19193894--19194037
72
2.0
72
94
0
252
20
21
10
47
1.79
19197904--19198047
44
3.1
45
85
9
182
23
11
8
56
1.62
19198297--19198346
4
12.2
4
79
12
57
76
4
0
20
0.95
19198300--19198340
21
2.0
21
95
0
73
73
4
0
21
1.02
19198297--19198346
13
4.1
12
80
12
57
76
4
0
20
0.95
19199006--19199047
19
2.2
20
86
4
68
35
33
0
30
1.58
19200381--19200415
3
11.7
3
100
0
70
0
31
0
68
0.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19207669--19207744
33
2.3
34
84
4
93
51
1
1
46
1.17
19207692--19207738
16
3.0
16
82
14
62
55
0
0
44
0.99
19207690--19207744
17
3.3
17
82
2
67
54
0
0
45
0.99
19207671--19207726
16
3.4
16
78
4
58
48
1
1
48
1.22
19208574--19208620
23
2.1
23
84
7
62
25
6
10
57
1.56
19210008--19210083
22
3.5
21
75
7
71
53
6
2
36
1.41
19210098--19210207
22
5.0
22
76
4
87
50
4
10
34
1.56
19210099--19210523
44
9.9
44
67
13
138
50
5
8
36
1.55
19210591--19210695
22
4.8
22
76
11
90
45
16
5
32
1.70
19211248--19211313
22
3.1
22
77
14
75
46
7
10
34
1.67

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131