Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167849.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_12, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22966848

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   

This is table  79  of  129  ( 15374 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12513891--12514044
51
3.0
51
79
1
182
35
11
13
39
1.81
12513925--12514007
17
4.8
17
78
8
78
34
8
14
42
1.76
12513956--12514042
16
5.2
16
69
10
50
34
11
13
40
1.81
12513884--12514040
52
3.1
51
78
4
183
35
12
12
40
1.81
12513854--12514044
103
1.9
101
89
4
294
35
12
12
39
1.80
12514127--12514167
21
2.0
21
90
0
64
31
14
17
36
1.90
12514297--12514404
44
2.5
44
84
6
130
37
17
10
34
1.84
12514447--12514600
21
7.2
22
84
7
192
40
16
5
37
1.72
12514454--12514598
43
3.4
43
84
10
197
40
15
5
38
1.70
12515023--12515193
77
2.2
79
83
4
213
31
24
9
33
1.88
12515805--12515848
15
2.9
15
83
10
54
9
11
0
79
0.93
12516205--12516237
14
2.3
15
89
5
50
18
3
0
78
0.87
12520115--12520145
15
2.0
16
93
6
55
25
0
0
74
0.82
12522252--12522282
2
16.0
2
93
6
55
48
0
0
51
1.00
12522557--12522591
2
17.5
2
100
0
70
51
0
48
0
1.00
12524494--12524524
9
3.4
9
95
0
53
41
0
0
58
0.98
12525489--12525532
19
2.2
20
88
11
65
79
9
0
11
0.93
12525502--12525538
19
1.9
19
88
0
56
83
5
2
8
0.88
12525779--12525940
51
3.1
53
75
10
156
36
19
16
28
1.93
12526571--12526742
40
4.3
40
82
5
197
41
20
12
25
1.87
12526849--12527111
40
6.6
40
83
3
300
42
20
11
25
1.85
12526828--12527078
119
2.1
119
97
0
475
41
21
11
25
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12526828--12527111
79
3.6
80
80
4
324
42
20
11
26
1.86
12539633--12539670
12
3.2
12
85
11
51
71
10
0
18
1.14
12539620--12539676
26
2.2
24
78
9
60
71
8
0
19
1.11
12539651--12539696
20
2.3
20
88
3
67
80
8
0
10
0.91
12539958--12539991
18
1.9
18
88
5
52
44
29
11
14
1.81
12567916--12567969
10
5.3
10
93
2
90
0
12
0
87
0.56
12568655--12568724
26
2.7
26
88
0
104
32
31
12
22
1.92
12568937--12568988
10
4.9
11
90
9
90
26
0
0
73
0.84
12568937--12568989
21
2.5
21
96
0
97
28
0
0
71
0.86
12568985--12569031
21
2.1
23
84
7
62
27
0
4
68
1.08
12570237--12570274
15
2.4
16
86
8
51
81
10
2
5
0.94
12572322--12572729
208
2.0
208
91
0
656
47
14
16
21
1.82
12575133--12575200
8
8.2
8
75
12
57
66
0
1
32
1.01
12575132--12575161
15
1.9
15
93
6
51
63
0
0
36
0.95
12575149--12575201
17
3.1
16
71
12
52
67
0
1
30
1.01
12590307--12590340
17
1.9
17
94
5
59
5
5
0
88
0.64
12590775--12590815
9
4.6
9
82
11
57
26
2
0
70
0.99
12590784--12590818
18
1.9
18
100
0
70
28
2
0
68
1.04
12590775--12590835
8
7.2
8
76
9
59
31
1
0
67
1.01
12591001--12591543
171
3.2
170
84
2
716
43
13
21
22
1.86
12591427--12591821
101
3.9
99
78
8
363
46
11
18
23
1.81
12591425--12591792
203
1.8
202
81
5
465
46
11
18
23
1.82
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12592263--12592298
18
2.0
18
88
0
54
8
27
0
63
1.23
12592817--12592857
21
2.0
21
85
0
55
34
4
0
60
1.18
12595279--12595633
177
2.0
178
98
1
685
39
7
7
45
1.62
12601532--12601575
21
2.0
22
87
12
65
65
2
6
25
1.28
12629395--12629438
21
2.0
22
87
12
65
25
6
2
65
1.28
12635594--12635759
79
2.1
80
79
2
174
27
8
8
56
1.58
12641839--12641975
66
2.1
66
92
0
229
45
10
7
36
1.67
12641834--12641961
36
3.8
35
77
14
144
45
10
7
37
1.65
12642023--12642288
146
1.8
146
85
1
381
37
22
13
25
1.91
12645346--12645379
1
34.0
1
100
0
68
100
0
0
0
0.00
12645910--12645984
19
3.7
19
68
23
55
42
0
10
46
1.38
12646018--12646075
3
19.0
3
78
16
57
31
1
3
63
1.21
12646039--12646073
17
2.1
17
94
0
61
34
2
0
62
1.10
12646038--12646075
20
1.9
20
94
0
67
34
2
0
63
1.09
12646452--12646482
11
2.7
11
95
5
53
38
0
9
51
1.35
12646893--12646936
12
3.6
12
78
6
52
9
0
9
81
0.87
12647013--12647063
4
11.8
4
82
15
50
72
1
5
19
1.15
12647240--12647268
13
2.1
14
93
6
51
34
10
6
48
1.64
12651874--12652294
208
2.0
208
98
0
815
41
16
15
26
1.88
12658708--12658737
8
3.6
8
95
4
51
83
0
3
13
0.77
12659607--12660010
40
10.3
39
79
3
391
25
12
20
42
1.87
12659613--12660010
79
5.1
79
86
2
498
25
12
20
41
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12660157--12660227
3
23.0
3
87
11
99
30
0
2
66
1.06
12660988--12661035
19
2.6
19
86
3
62
10
2
4
83
0.87
12660988--12661047
6
9.8
6
79
15
52
11
1
5
81
0.91
12661002--12661046
19
2.4
18
82
10
54
15
0
6
77
0.96
12660999--12661092
28
3.5
28
72
15
72
20
0
7
72
1.08
12661328--12661356
13
2.1
14
93
6
51
34
10
6
48
1.64
12662357--12662396
21
1.9
21
94
0
71
45
15
2
37
1.59
12663920--12663974
22
2.5
21
82
8
65
27
7
0
65
1.19
12663920--12663985
22
3.0
22
78
10
64
25
6
0
68
1.13
12665289--12665322
3
11.7
3
93
6
61
64
0
0
35
0.94
12665581--12665906
167
1.9
168
83
6
419
39
16
11
33
1.83
12665875--12666010
52
2.6
51
79
9
148
47
18
7
26
1.74
12665948--12666074
65
2.0
64
84
1
164
44
19
9
26
1.81
12666957--12666993
16
2.3
16
90
0
65
0
0
8
91
0.41
12666957--12667009
1
53.0
1
78
0
52
1
3
5
88
0.67
12678356--12678418
21
3.0
21
84
11
60
23
4
1
69
1.16
12678366--12678418
22
2.5
21
84
9
63
26
3
1
67
1.17
12678522--12678599
38
2.1
38
95
0
138
46
10
0
43
1.37
12678530--12678598
21
3.5
21
73
15
74
50
8
0
40
1.33
12679445--12679484
20
2.0
21
85
5
55
12
2
15
70
1.28
12685426--12685459
11
3.1
11
82
0
50
52
0
0
47
1.00
12685430--12685463
17
2.1
16
94
5
59
58
0
0
41
0.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12686098--12686134
19
1.9
19
88
0
56
43
0
0
56
0.99
12686148--12686201
28
2.0
27
82
10
65
46
1
3
48
1.30
12686196--12686239
12
3.6
12
81
3
52
50
0
0
50
1.00
12690130--12690177
22
2.1
23
84
3
62
33
6
2
58
1.35
12690168--12690233
27
2.4
27
79
20
84
28
4
1
65
1.21
12691932--12691983
21
2.5
21
90
6
79
50
0
0
50
1.00
12691932--12691983
22
2.5
22
93
6
90
50
0
0
50
1.00
12691955--12692012
30
1.9
30
85
0
80
50
1
0
48
1.11
12697630--12697678
22
2.2
23
85
10
66
67
0
0
32
0.91
12703770--12703805
11
3.3
11
85
14
56
27
0
0
72
0.85
12705965--12706019
17
3.2
17
84
7
76
54
3
0
41
1.18
12707052--12707090
15
2.6
15
84
8
53
82
2
0
15
0.79
12707626--12707675
17
2.8
17
82
8
55
84
6
6
4
0.88
12707631--12707675
19
2.5
19
85
7
58
84
6
6
2
0.85
12718150--12718194
13
3.1
15
81
12
58
71
0
15
13
1.15
12718625--12718776
48
3.2
48
83
0
187
28
14
17
39
1.89
12720166--12720211
5
10.0
5
95
4
64
21
0
0
78
0.76
12720167--12720209
4
9.8
4
97
2
50
20
0
0
79
0.74
12720167--12720211
9
5.0
9
82
17
58
22
0
0
77
0.76
12720847--12720872
5
5.2
5
100
0
52
76
0
0
23
0.78
12721825--12721903
28
2.8
27
74
11
70
54
1
1
43
1.16
12725948--12726081
68
2.0
68
86
0
187
36
4
8
50
1.52
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12726320--12726361
14
2.9
15
89
6
61
30
0
4
64
1.14
12730055--12730095
12
3.5
12
86
3
57
60
0
0
39
0.96
12730999--12731398
198
2.0
198
100
0
800
28
13
19
39
1.89
12734687--12734734
21
2.3
21
81
0
60
37
22
10
29
1.88
12737582--12737631
22
2.3
22
89
6
75
28
14
8
50
1.70
12737582--12737643
22
2.8
22
85
0
70
29
14
8
48
1.72
12737627--12737916
103
2.8
102
71
9
253
33
14
10
41
1.81
12737792--12737873
43
1.9
43
82
0
101
31
17
17
34
1.93
12738501--12738711
118
1.8
116
79
12
243
32
16
13
37
1.87
12739821--12739855
15
2.3
15
85
0
52
37
0
5
57
1.23

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129