Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167849.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_12, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22966848

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   

This is table  52  of  129  ( 15374 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7340254--7340375
64
1.9
65
86
1
174
38
13
9
38
1.77
7351521--7351573
24
2.3
24
87
6
74
32
13
26
28
1.93
7351529--7351576
22
2.1
24
92
7
82
35
16
20
27
1.94
7353640--7353690
16
3.1
16
82
2
66
27
5
3
62
1.36
7353820--7353850
3
10.3
3
100
0
62
67
0
0
32
0.91
7361342--7361388
16
2.9
16
87
0
67
44
19
4
31
1.70
7370233--7370277
23
2.0
23
83
8
58
13
11
0
75
1.05
7377082--7377520
144
3.1
144
78
6
401
40
13
13
31
1.84
7378034--7378637
49
12.2
50
79
8
506
39
14
11
35
1.81
7379117--7379158
6
6.7
6
91
2
57
14
11
0
73
1.09
7379113--7379207
7
12.7
7
80
17
79
14
17
1
66
1.31
7379198--7379244
22
2.1
22
84
7
60
10
19
0
70
1.16
7380281--7381786
130
11.7
130
74
6
933
36
7
16
39
1.77
7381192--7381595
126
3.2
123
75
11
327
38
7
15
39
1.75
7382222--7382577
129
2.8
130
79
7
327
38
16
7
37
1.78
7382909--7383077
77
2.2
76
82
1
203
40
17
8
33
1.80
7382986--7384561
130
12.2
128
76
8
1225
38
16
7
37
1.77
7383003--7384523
259
5.9
259
76
9
1235
38
16
7
37
1.77
7384884--7385349
129
3.6
128
81
7
494
39
17
7
35
1.77
7385275--7385417
77
1.9
76
82
7
182
39
16
11
32
1.83
7385125--7385539
206
2.0
204
81
5
480
39
16
7
36
1.78
7384998--7385618
334
1.9
332
81
6
770
38
16
7
36
1.78
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7385330--7386653
129
10.2
128
75
8
921
38
16
7
37
1.77
7384950--7385797
463
1.8
463
81
5
1061
38
16
7
36
1.78
7386969--7387331
127
2.8
128
81
8
400
38
17
7
35
1.79
7388161--7388368
112
1.9
108
84
4
272
35
9
17
37
1.83
7388414--7388695
130
2.2
130
81
3
318
38
6
15
39
1.74
7391338--7391386
20
2.5
19
83
3
62
28
12
10
48
1.73
7391674--7391759
5
17.0
5
73
17
54
3
2
19
74
1.07
7391671--7391758
25
3.7
24
73
11
83
3
2
18
76
1.04
7391679--7391758
20
3.9
20
76
22
69
3
2
18
75
1.07
7391903--7392039
72
1.9
72
83
3
177
53
10
15
20
1.72
7392124--7392216
35
2.7
35
81
9
109
44
13
24
17
1.85
7392742--7392814
28
2.7
26
76
4
74
32
8
20
38
1.82
7401798--7402119
129
2.5
131
79
4
316
39
16
7
36
1.76
7401798--7402527
130
5.7
127
71
8
447
39
15
6
38
1.73
7402699--7404015
129
10.3
126
73
11
617
39
15
7
38
1.75
7402707--7403963
258
4.9
256
73
10
836
39
15
7
38
1.75
7404139--7404776
129
4.9
126
73
13
358
39
15
7
37
1.76
7404220--7405305
129
8.4
127
73
9
538
39
16
7
36
1.78
7404221--7405222
258
3.9
254
74
8
787
39
16
7
36
1.78
7405333--7405586
129
2.0
130
81
6
300
39
13
9
37
1.76
7405603--7406218
254
2.4
253
78
5
618
40
16
7
35
1.77
7405603--7407135
129
12.0
128
73
10
943
38
16
8
35
1.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7407151--7408082
130
7.3
126
75
9
672
39
16
8
35
1.80
7408169--7408387
113
1.9
114
81
4
264
39
16
6
37
1.74
7408281--7408845
130
4.4
130
74
7
380
40
14
9
35
1.79
7408833--7408984
80
1.9
80
82
10
195
38
19
5
36
1.76
7409175--7409739
130
4.4
127
75
8
370
38
16
8
36
1.80
7409755--7410500
128
5.8
129
79
6
676
39
17
6
35
1.76
7409801--7410500
258
2.7
254
79
6
711
39
17
6
36
1.75
7410562--7413733
129
24.6
128
75
7
2168
38
16
8
36
1.80
7410627--7413770
645
4.9
643
79
6
2696
38
16
8
36
1.80
7413875--7414306
127
3.4
128
81
6
455
40
15
6
36
1.74
7413998--7414669
356
1.9
355
79
8
767
38
16
7
37
1.76
7414353--7414885
128
4.1
130
77
5
418
37
16
8
37
1.79
7427317--7427614
149
2.0
149
100
0
596
25
22
10
41
1.86
7429117--7429239
55
2.2
55
83
0
165
34
18
11
35
1.87
7429931--7429977
21
2.2
21
96
0
85
17
12
12
57
1.65
7442234--7442280
3
15.7
3
90
0
76
4
0
27
68
1.08
7442282--7442357
3
25.7
3
84
7
102
28
1
0
69
0.96
7442285--7442373
29
3.0
29
85
4
90
31
1
0
67
0.98
7442803--7442912
57
2.0
55
82
7
132
55
18
14
11
1.69
7444063--7444164
7
13.9
7
70
25
61
25
2
0
70
1.07
7444053--7444137
8
10.4
8
81
12
77
27
3
0
69
1.05
7444027--7444161
26
5.2
26
72
21
97
27
3
0
68
1.12
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7444052--7444165
7
15.1
7
73
13
52
25
2
0
71
1.05
7444472--7444593
6
20.0
6
71
14
63
1
4
17
76
1.05
7444473--7444515
20
2.2
20
82
0
50
4
6
13
74
1.19
7444494--7444537
17
2.5
17
85
3
52
2
4
13
79
0.98
7444512--7444561
12
4.3
12
87
10
77
0
0
22
78
0.76
7444499--7444555
28
2.0
28
83
6
71
1
3
17
77
1.00
7444487--7444549
7
8.3
7
75
16
54
1
3
15
79
0.94
7444638--7444703
31
2.1
31
88
0
96
48
18
16
16
1.82
7444722--7444775
23
2.4
24
76
20
62
20
20
24
35
1.96
7445021--7445230
32
6.5
31
77
11
163
29
12
16
41
1.85
7445008--7445131
64
1.9
65
85
4
171
31
13
15
39
1.86
7445486--7445543
22
2.6
22
86
5
73
31
22
17
29
1.96
7445528--7445614
32
2.8
31
78
14
92
33
17
18
31
1.94
7446561--7446640
25
3.0
25
74
23
74
3
20
0
76
0.94
7446561--7446641
6
12.8
6
75
19
76
3
20
0
75
0.96
7446578--7446641
25
2.5
26
76
19
80
4
20
0
75
0.99
7446613--7446648
14
2.4
15
86
13
56
5
19
0
75
1.00
7446573--7446649
11
6.1
13
75
17
65
5
20
0
74
1.01
7450918--7450952
18
2.0
17
88
5
52
11
14
0
74
1.08
7451259--7451292
17
2.1
17
88
5
52
70
14
0
14
1.17
7452889--7452925
19
1.9
19
88
0
56
24
8
18
48
1.75
7453007--7453031
13
1.9
13
100
0
50
24
8
16
52
1.70
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7453153--7453225
14
5.4
14
76
11
62
26
1
1
71
1.02
7453167--7453232
21
3.2
20
77
14
71
25
1
1
71
1.04
7453147--7453233
26
3.2
27
82
9
97
27
1
1
70
1.02
7453326--7453359
3
11.3
3
100
0
68
32
0
0
67
0.91
7456895--7456981
14
7.3
11
70
27
54
72
2
5
19
1.16
7456945--7456983
5
7.6
5
83
16
53
76
0
2
20
0.90
7457947--7458030
3
28.7
3
77
9
84
60
3
2
33
1.27
7458057--7458112
28
2.0
29
82
3
69
71
1
5
21
1.15
7465427--7465472
18
2.4
19
79
17
51
60
0
2
36
1.09
7465475--7465506
16
1.9
17
93
6
57
75
3
3
18
1.08
7466114--7466159
24
1.9
24
90
0
74
28
45
4
21
1.71
7469540--7469583
22
2.0
22
82
8
54
40
0
0
59
0.98
7469581--7469634
20
2.7
20
77
5
56
57
0
5
37
1.22
7470247--7470281
10
3.5
10
84
0
52
17
8
17
57
1.64
7477101--7477130
13
2.2
14
94
5
53
76
0
0
23
0.78
7477134--7477158
11
2.3
11
100
0
50
92
0
8
0
0.40
7481597--7481958
185
2.0
183
87
6
525
37
12
24
25
1.91
7483851--7484064
107
2.0
107
100
0
428
43
7
10
38
1.67
7485262--7485292
15
2.1
15
93
0
53
45
16
6
32
1.72
7485483--7485540
19
2.8
20
82
10
64
55
0
3
41
1.17
7485491--7485566
19
3.9
19
77
13
73
56
0
5
38
1.22
7485555--7485600
17
2.8
16
84
12
58
76
6
0
17
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7485747--7485876
9
15.5
8
68
19
54
60
2
1
36
1.19
7485753--7485868
18
6.3
18
70
20
62
60
2
1
35
1.21
7485791--7485876
9
9.7
9
73
14
63
60
1
2
36
1.17
7486024--7486063
20
2.0
21
85
9
57
30
0
7
62
1.23
7486033--7486156
46
2.8
45
76
11
114
28
0
6
64
1.23
7486199--7486268
20
3.6
20
70
16
58
31
1
4
62
1.23
7486926--7486964
2
19.5
2
86
0
51
51
0
46
2
1.14
7488031--7488079
6
8.2
6
95
0
89
51
14
0
34
1.43
7488488--7488556
2
35.0
2
85
8
97
49
2
1
46
1.25
7489766--7489804
14
2.7
14
88
4
51
30
0
12
56
1.37

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129