Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168381.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_6, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26551601

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   

This is table  105  of  130  ( 15485 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20601548--20601595
9
5.3
9
78
9
53
0
10
4
85
0.73
20603256--20603321
30
2.2
30
89
5
98
31
13
21
33
1.92
20607839--20608235
145
2.7
144
79
7
351
38
12
16
32
1.87
20612162--20612240
26
3.2
24
74
11
63
49
1
11
37
1.47
20612336--20613091
379
2.0
379
85
1
1030
32
16
14
36
1.89
20613353--20613428
24
3.2
24
66
26
61
46
34
3
15
1.65
20614049--20614083
17
2.1
17
100
0
70
60
17
0
22
1.37
20614935--20614973
17
2.2
19
86
9
55
15
2
5
76
1.06
20616275--20616987
236
3.0
236
86
2
939
32
9
13
44
1.75
20619007--20619692
202
3.4
200
79
3
705
33
12
11
43
1.78
20621056--20621232
92
1.9
91
80
3
203
27
8
11
53
1.65
20626088--20626112
13
1.9
13
100
0
50
32
12
0
56
1.36
20626533--20626574
20
2.1
21
87
12
63
16
4
2
76
1.07
20628842--20628881
17
2.4
17
82
0
53
40
17
0
42
1.49
20629503--20629560
30
1.9
29
83
13
73
51
1
10
36
1.46
20630170--20630225
18
2.9
20
82
15
57
46
1
1
50
1.22
20630184--20630225
18
2.3
19
87
4
59
52
0
0
47
1.00
20630290--20630327
19
2.1
19
90
5
60
28
2
0
68
1.03
20630734--20630814
25
3.3
25
76
13
96
34
2
3
59
1.29
20630733--20630800
23
2.9
23
80
10
66
33
2
4
58
1.33
20630859--20630932
27
2.7
27
78
14
80
43
0
0
56
0.99
20631201--20631253
22
2.5
21
76
11
63
41
3
1
52
1.30
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20632305--20632329
12
2.1
12
100
0
50
32
28
0
40
1.57
20639768--20639811
22
2.0
22
86
4
63
68
4
0
27
1.09
20650107--20650166
31
1.9
31
86
6
86
50
5
1
43
1.34
20650376--20650458
42
2.0
42
97
0
157
28
6
10
54
1.59
20650895--20651600
114
6.2
115
83
2
721
36
15
24
23
1.94
20651758--20651874
40
2.9
38
80
9
126
30
18
16
34
1.93
20653710--20653753
20
2.2
20
95
0
79
38
31
25
4
1.76
20653708--20653825
62
1.9
63
82
5
150
32
29
21
16
1.95
20653771--20653815
20
2.2
20
84
0
54
33
28
22
15
1.95
20654062--20654103
14
3.1
15
80
19
56
7
42
21
28
1.79
20654062--20654098
13
2.7
14
80
20
51
8
43
24
24
1.81
20660560--20660591
4
8.0
4
92
0
55
53
0
21
25
1.46
20670459--20670508
27
1.9
25
88
8
73
46
4
0
50
1.20
20675706--20675755
25
2.0
25
84
0
64
38
0
6
56
1.24
20676489--20676531
2
21.5
2
100
0
86
51
0
0
48
1.00
20678451--20678492
10
4.2
10
85
11
50
45
2
0
52
1.13
20678456--20678493
20
1.9
19
89
5
58
44
2
0
52
1.14
20684632--20684674
21
2.0
21
86
0
59
58
6
9
25
1.54
20686370--20686424
29
1.9
28
81
3
65
54
7
9
29
1.58
20687011--20687070
29
2.1
27
81
6
66
46
6
0
46
1.29
20688558--20688597
17
2.4
16
83
4
53
62
2
0
35
1.09
20689307--20689341
18
1.9
18
88
0
52
71
5
8
14
1.29
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20689512--20689579
14
5.1
13
73
16
50
77
0
13
8
0.98
20689607--20689655
4
12.2
4
91
0
80
53
0
24
22
1.47
20690827--20690876
3
16.7
3
100
0
100
32
0
0
68
0.90
20692716--20692779
31
2.1
29
85
5
83
50
12
14
23
1.76
20692832--20692878
24
2.0
24
86
0
67
25
17
21
36
1.94
20692988--20693036
2
24.5
2
87
0
71
51
0
6
42
1.27
20699423--20699460
17
2.2
17
100
0
76
18
15
10
55
1.68
20706826--20706882
18
2.9
19
82
10
71
56
0
3
40
1.17
20707898--20707940
23
1.9
22
90
4
68
4
16
2
76
1.05
20709319--20709362
22
2.0
22
82
8
54
34
2
2
61
1.21
20710488--20710534
7
6.6
7
90
2
58
42
14
0
42
1.46
20714145--20714193
25
2.0
25
84
8
64
12
2
10
75
1.13
20714949--20714978
14
2.1
14
93
0
51
36
36
3
23
1.71
20715063--20715123
9
6.4
9
83
10
68
57
4
0
37
1.20
20715029--20715136
39
2.7
40
76
13
114
51
5
0
41
1.31
20715079--20715150
10
7.1
11
80
6
57
56
2
1
38
1.22
20715069--20715148
20
4.1
19
80
7
97
58
2
1
37
1.19
20715063--20715199
9
14.4
9
72
13
62
56
3
1
37
1.26
20715068--20715153
30
3.0
27
75
14
84
55
2
1
40
1.20
20715614--20715693
20
4.2
18
76
9
79
58
7
0
33
1.26
20715632--20715907
19
14.4
19
68
11
82
54
5
1
39
1.30
20715614--20715856
30
8.4
27
68
13
76
54
6
0
38
1.31
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20715803--20715856
20
2.7
21
80
11
69
57
3
1
37
1.27
20715804--20715852
10
4.9
10
80
9
55
59
4
2
34
1.28
20715806--20715877
30
2.4
30
86
2
92
58
4
1
36
1.26
20716415--20716541
20
6.6
19
68
16
73
54
9
1
34
1.42
20716472--20716514
10
4.3
10
82
11
61
60
11
2
25
1.43
20715089--20716593
708
2.1
707
81
7
1667
44
10
6
38
1.65
20716942--20716994
10
5.4
10
79
4
54
32
1
0
66
1.03
20716945--20717017
28
2.6
27
80
10
74
39
2
0
57
1.13
20717519--20717552
18
1.9
17
88
5
50
8
0
5
85
0.75
20717846--20717881
14
2.6
15
83
16
51
11
8
0
80
0.90
20717961--20718315
180
2.0
175
91
3
577
32
7
13
47
1.70
20718005--20718367
180
2.0
177
85
4
478
31
6
12
49
1.66
20718907--20719004
6
16.3
6
89
0
124
66
8
0
25
1.19
20718907--20719004
15
6.5
15
89
0
124
66
8
0
25
1.19
20719003--20719048
3
15.3
3
90
0
74
30
0
4
65
1.12
20719003--20719047
18
2.5
18
100
0
90
28
0
4
66
1.11
20719778--20719822
18
2.4
19
82
17
58
35
2
2
60
1.22
20719991--20720034
21
2.1
21
87
4
63
9
6
0
84
0.79
20719991--20720038
22
2.2
21
85
3
60
8
8
0
83
0.82
20719905--20720196
159
1.8
159
80
10
346
27
9
5
57
1.54
20720153--20720227
27
3.0
24
76
19
80
2
9
5
82
0.91
20720191--20720226
18
1.9
18
88
5
54
2
11
5
80
0.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20720928--20720953
9
2.9
9
100
0
52
11
0
0
88
0.52
20721396--20721429
11
2.9
12
86
8
52
61
0
0
38
0.96
20726578--20726828
92
2.8
90
80
3
254
36
18
10
33
1.86
20727017--20727250
91
2.6
91
76
5
213
35
22
9
32
1.87
20733878--20734009
44
3.0
45
90
2
203
50
6
27
15
1.68
20735709--20735734
10
2.6
10
100
0
52
61
0
0
38
0.96
20735751--20735796
10
4.7
10
81
5
58
63
0
2
34
1.07
20735753--20735796
19
2.2
20
88
4
63
65
0
2
31
1.05
20735932--20735962
14
2.2
14
94
0
53
16
0
0
83
0.64
20735999--20736113
56
2.0
57
84
3
151
30
17
20
31
1.96
20744398--20744432
2
17.5
2
100
0
70
0
51
0
48
1.00
20744433--20744467
2
17.5
2
87
0
52
57
0
0
42
0.99
20755984--20756065
41
2.0
41
85
4
112
43
19
9
26
1.82
20764127--20764160
17
1.9
18
88
5
52
35
2
0
61
1.11
20765336--20765373
19
2.0
19
89
0
58
36
5
13
44
1.66
20768289--20768349
29
2.1
30
82
14
74
55
6
1
36
1.36
20770905--20770972
34
1.9
35
91
5
111
38
10
14
36
1.81
20771629--20771693
5
12.6
5
76
12
60
35
1
3
60
1.22
20771624--20771700
18
4.4
18
75
16
65
35
1
2
61
1.18
20771624--20771701
10
7.4
11
74
18
60
34
1
2
61
1.18
20775131--20775348
120
1.8
119
81
1
274
21
22
11
45
1.83
20775189--20775664
120
3.9
119
74
8
336
21
22
10
44
1.84
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20775782--20776028
66
3.8
66
74
1
219
21
21
12
44
1.85
20776909--20776947
19
2.1
19
90
0
60
20
2
0
76
0.90
20776885--20776969
27
3.1
27
70
16
75
20
2
3
74
1.08
20777029--20777086
26
2.3
26
87
3
82
62
5
5
27
1.38
20777146--20777204
6
9.7
6
85
3
82
79
3
1
15
0.94
20780878--20781099
58
3.8
58
90
7
324
35
11
6
46
1.66
20780878--20781099
119
1.9
116
86
10
317
35
11
6
46
1.66
20781137--20781242
9
10.9
9
67
18
52
74
3
4
16
1.14
20782237--20782377
4
34.5
4
71
19
80
67
2
1
28
1.13
20782446--20782485
20
2.0
21
95
5
73
22
25
27
25
2.00

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130