Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168381.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_6, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26551601

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   

This is table  50  of  130  ( 15485 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11288825--11288864
19
2.0
20
85
4
55
52
0
0
47
1.00
11288965--11288998
15
2.3
15
89
0
50
55
0
5
38
1.24
11289012--11289107
33
2.9
33
81
4
113
58
1
1
39
1.12
11289005--11289063
25
2.3
26
80
11
70
57
0
0
42
0.98
11289069--11289107
12
3.2
12
85
3
51
64
2
0
33
1.08
11289701--11290128
179
2.4
180
83
1
518
41
8
8
41
1.66
11290204--11290251
25
1.9
25
84
16
64
52
2
0
45
1.12
11290215--11290248
17
1.9
17
88
5
50
52
0
0
47
1.00
11290334--11290388
23
2.4
23
80
17
62
52
1
0
45
1.11
11290395--11290428
16
2.0
16
88
11
50
44
5
0
50
1.26
11290466--11290512
14
3.1
14
85
14
58
63
0
0
36
0.94
11290465--11290516
25
2.1
24
82
10
61
61
0
0
38
0.96
11290669--11290732
30
2.2
29
86
8
85
46
1
0
51
1.10
11290681--11290739
29
2.0
30
83
3
75
47
0
1
50
1.11
11290797--11291407
177
3.4
173
76
7
481
42
10
7
39
1.68
11292198--11292766
315
1.8
312
81
4
714
43
7
7
41
1.62
11292653--11293210
181
3.1
177
77
4
562
41
8
8
41
1.67
11292572--11293210
181
3.5
181
77
3
500
40
8
8
42
1.66
11293858--11294696
177
4.7
176
77
9
689
44
10
7
38
1.66
11294037--11294696
358
1.8
358
81
4
812
43
10
7
38
1.67
11294864--11295247
177
2.2
175
80
8
409
43
10
7
38
1.68
11295522--11295574
23
2.3
23
81
15
58
47
1
0
50
1.12
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11295604--11295657
16
3.5
16
76
14
51
50
0
0
50
1.00
11295608--11295645
13
2.6
15
84
16
53
50
0
0
50
1.00
11295603--11295658
21
2.8
20
81
15
62
48
0
0
51
1.00
11295815--11295877
34
1.9
31
84
9
81
57
1
3
38
1.24
11296023--11296062
7
5.4
7
85
8
53
45
0
2
52
1.14
11297188--11297212
13
1.9
13
100
0
50
48
0
0
52
1.00
11297174--11297230
29
2.0
29
83
6
73
52
0
0
47
1.00
11297200--11297244
23
1.9
24
81
4
56
48
4
0
46
1.22
11297229--11297634
176
2.3
174
81
8
466
42
10
8
38
1.69
11297678--11297709
17
2.0
17
88
11
50
43
0
6
50
1.27
11297677--11297719
14
2.9
15
80
13
54
46
0
4
48
1.22
11298571--11298627
25
2.5
24
83
13
68
45
5
0
49
1.24
11299920--11299970
27
2.0
27
85
14
72
41
1
5
50
1.37
11299975--11300001
12
2.2
12
100
0
54
40
0
0
59
0.98
11300368--11300415
21
2.3
21
78
7
53
43
2
2
52
1.24
11300512--11300581
8
8.9
8
75
20
51
44
1
0
54
1.09
11300485--11300574
37
2.5
35
77
13
87
48
1
0
50
1.08
11300486--11300558
29
2.8
25
78
17
76
50
0
0
49
1.00
11300508--11300576
33
2.1
33
84
15
90
46
1
0
52
1.09
11300793--11300845
9
5.6
10
79
20
53
50
0
1
47
1.12
11300878--11300927
16
3.1
17
74
8
50
48
4
2
46
1.32
11301169--11301421
10
22.9
11
66
22
54
47
2
1
49
1.22
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11301235--11301385
28
5.6
28
66
22
90
47
1
1
49
1.18
11301324--11301400
28
2.9
25
76
16
75
49
1
0
49
1.09
11301391--11301418
5
5.6
5
100
0
56
57
0
0
42
0.99
11302338--11302377
20
2.0
21
85
5
55
55
2
0
42
1.13
11302345--11302411
12
5.7
12
71
18
52
49
1
0
49
1.10
11302513--11302568
22
2.5
22
78
13
62
46
0
7
46
1.30
11302668--11302704
17
2.2
17
90
0
56
43
0
0
56
0.99
11302891--11302960
26
2.9
25
86
14
94
52
0
1
45
1.09
11302919--11302976
19
3.1
18
82
5
62
53
0
0
46
1.00
11303106--11303150
24
2.0
22
83
16
56
57
2
2
37
1.23
11303478--11303531
15
3.7
15
76
13
60
44
0
0
55
0.99
11303558--11303620
19
3.3
19
72
16
58
46
3
1
49
1.27
11303695--11303734
15
2.5
16
88
8
55
47
2
0
50
1.14
11303700--11303795
24
3.9
24
72
15
72
52
1
0
46
1.07
11303723--11303764
21
2.0
21
85
0
57
54
0
0
45
0.99
11303733--11303795
13
5.1
13
70
18
62
52
0
0
47
1.00
11303728--11303798
11
6.0
11
72
18
54
52
0
0
47
1.00
11303727--11303799
24
3.0
25
73
15
73
53
0
0
46
1.00
11303996--11304026
14
2.3
13
94
5
53
51
0
0
48
1.00
11303987--11304052
20
3.5
19
78
11
66
48
1
0
50
1.10
11304364--11304702
181
1.9
181
84
1
455
42
9
9
38
1.70
11305155--11305224
22
3.2
21
80
11
70
44
4
0
51
1.21
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11305156--11305245
26
3.6
26
78
19
77
44
4
0
51
1.21
11306013--11306742
181
4.1
181
76
5
583
41
8
9
41
1.66
11306960--11307002
20
2.2
20
87
8
61
44
2
0
53
1.13
11306955--11307000
20
2.4
19
77
19
51
45
2
0
52
1.13
11307000--11307042
13
3.2
13
81
12
50
41
2
2
53
1.26
11307320--11307361
20
2.2
20
82
4
50
40
4
2
52
1.35
11307656--11307943
158
1.9
154
81
5
355
41
9
10
38
1.72
11308967--11309014
22
2.2
21
79
13
53
47
6
0
45
1.27
11308973--11309018
22
2.1
22
84
8
58
47
4
0
47
1.21
11309013--11309056
18
2.4
19
81
11
56
47
2
2
47
1.27
11310035--11310073
20
2.0
20
85
10
53
53
0
0
46
1.00
11309997--11310058
25
2.6
24
78
12
65
50
0
0
50
1.00
11310014--11310078
26
2.5
26
80
14
71
53
0
0
46
1.00
11310054--11310123
15
4.2
17
71
18
58
51
2
0
45
1.16
11309984--11310130
13
10.9
14
64
25
52
49
1
0
48
1.14
11310254--11310286
16
2.1
16
88
11
50
42
0
0
57
0.98
11310288--11310410
36
3.4
35
71
24
96
56
1
0
40
1.14
11310362--11310419
23
2.6
21
81
8
71
58
1
0
39
1.08
11310510--11310542
14
2.2
16
89
10
52
42
0
3
54
1.15
11311087--11311127
11
3.7
11
81
12
57
53
4
0
41
1.22
11311076--11311136
22
2.6
23
84
10
88
52
3
0
44
1.17
11311656--11311698
22
2.0
22
86
9
61
39
0
6
53
1.28
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11312265--11312329
26
2.3
29
72
15
66
47
0
0
52
1.00
11312298--11312413
9
13.3
9
70
22
63
44
1
0
52
1.17
11312309--11312378
17
4.2
17
73
23
67
45
0
1
52
1.09
11312272--11312374
33
3.0
32
76
14
91
48
0
0
50
1.07
11312289--11312403
26
4.4
24
73
21
81
46
1
0
50
1.17
11314281--11314323
12
3.5
12
80
3
50
48
0
0
51
1.00
11314424--11314471
22
2.2
23
85
10
66
43
2
4
50
1.33
11314562--11314598
17
2.2
17
90
0
56
43
0
0
56
0.99
11314784--11314841
25
2.3
26
88
8
84
50
0
3
46
1.18
11314795--11314851
26
2.0
27
83
12
71
52
0
1
45
1.11
11314812--11314861
19
2.6
19
81
6
57
50
0
0
50
1.00
11315297--11315370
33
2.3
32
83
6
87
48
4
0
47
1.20
11315309--11315371
32
1.9
33
87
3
92
47
3
0
49
1.17
11315450--11315510
22
2.7
23
77
12
63
45
3
3
47
1.35
11315585--11315681
11
8.0
11
67
21
52
51
1
0
47
1.07
11315587--11315679
13
7.6
12
70
18
59
52
1
0
46
1.07
11315587--11315687
36
2.7
37
76
17
93
52
0
0
46
1.07
11315804--11315860
27
2.1
26
81
12
62
47
1
1
49
1.22
11315885--11315915
14
2.3
13
94
5
53
51
0
0
48
1.00
11315889--11315927
20
2.0
20
89
0
60
51
0
2
46
1.14
11316191--11316233
19
2.2
20
91
4
70
46
4
0
48
1.22
11316415--11316452
19
2.0
19
94
0
67
55
0
0
44
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11317151--11317183
16
2.0
17
88
5
50
48
0
0
51
1.00
11317339--11317386
24
2.0
24
84
8
62
50
2
0
47
1.12
11317418--11317450
16
1.9
18
88
11
52
42
0
6
51
1.26
11317525--11317578
22
2.4
21
76
11
54
51
0
3
44
1.19
11317779--11317823
20
2.2
20
88
0
63
48
0
2
48
1.13
11321772--11321831
27
2.2
27
93
0
102
36
31
11
20
1.88
11322878--11322908
16
1.9
16
93
0
53
32
16
9
41
1.80
11323146--11323179
17
2.0
17
94
0
59
50
2
0
47
1.16
11323275--11323320
17
2.7
18
83
10
60
45
0
0
54
0.99
11323268--11323319
22
2.2
25
83
10
74
44
0
0
55
0.99

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130