Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168381.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_6, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26551601

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   

This is table  75  of  130  ( 15485 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15404818--15404891
14
5.1
14
82
10
78
82
1
1
14
0.81
15404831--15404924
24
3.8
24
80
6
82
78
3
3
14
1.00
15404803--15404909
32
3.4
31
80
13
112
77
3
2
15
1.03
15405864--15405925
6
10.3
6
77
6
54
67
8
0
24
1.17
15405865--15405922
12
4.8
12
80
4
62
70
8
0
20
1.13
15406172--15406291
57
2.1
56
84
4
152
62
11
10
15
1.54
15406525--15406769
132
1.9
131
88
3
379
48
3
4
43
1.39
15407129--15407359
128
1.8
127
87
4
349
48
2
6
43
1.41
15407707--15407836
57
2.3
56
78
8
149
60
10
9
19
1.56
15407736--15407871
49
2.6
52
83
9
152
61
14
8
16
1.56
15409773--15410086
156
2.0
156
98
0
601
36
8
22
32
1.85
15416430--15416460
15
2.1
15
93
0
53
38
0
29
32
1.57
15418560--15418951
58
6.8
59
87
6
493
36
12
6
43
1.69
15418560--15418946
173
2.2
173
86
5
523
36
12
6
44
1.69
15418969--15419035
13
5.2
13
84
10
84
79
0
7
13
0.94
15418964--15419041
6
12.7
6
76
14
63
79
0
6
14
0.92
15419370--15419409
20
2.0
20
85
9
55
0
45
0
55
0.99
15419936--15419981
17
2.8
17
83
9
60
69
2
8
19
1.25
15419936--15420050
16
7.2
16
69
18
62
72
1
6
20
1.15
15419963--15420040
27
3.2
24
69
15
63
73
1
6
19
1.12
15419959--15420046
30
2.9
30
77
13
81
73
1
5
19
1.09
15420024--15420050
8
3.4
8
100
0
54
85
0
0
14
0.61
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15419925--15420079
83
1.9
83
81
8
190
70
1
5
23
1.15
15420315--15420445
42
3.0
44
85
6
133
40
21
15
22
1.90
15420364--15420904
41
13.1
41
82
8
483
36
20
16
26
1.93
15421372--15421432
22
2.8
21
77
5
68
32
18
8
40
1.80
15421824--15421964
63
2.2
63
83
0
192
29
23
10
36
1.89
15422647--15422671
8
3.1
8
100
0
50
12
12
0
76
1.04
15426557--15426593
16
2.4
16
86
13
51
83
0
8
8
0.80
15426608--15426827
57
3.8
59
83
10
274
36
11
7
44
1.68
15426608--15426825
116
1.9
116
83
7
291
36
11
7
44
1.69
15426848--15426896
9
6.0
8
84
15
57
87
0
2
10
0.62
15426838--15426890
14
4.0
14
78
14
58
84
0
3
11
0.73
15426843--15426979
6
22.3
6
79
12
57
72
1
0
24
0.97
15426838--15426896
23
2.6
23
86
10
77
84
0
3
11
0.73
15426843--15426896
16
3.5
16
87
5
76
87
0
1
11
0.63
15426910--15426974
3
22.0
3
96
3
123
66
0
0
33
0.92
15427237--15427279
16
2.6
17
81
3
52
0
48
0
51
1.00
15427594--15427635
19
2.2
19
86
0
57
0
19
16
64
1.30
15427850--15427930
24
3.3
24
77
14
78
75
1
4
18
1.05
15427893--15427955
27
2.3
27
84
10
76
73
0
3
23
0.98
15427833--15427964
62
2.1
63
79
16
143
73
0
4
21
1.06
15430625--15430659
17
1.9
17
88
11
52
48
0
5
45
1.26
15430625--15430662
19
2.0
19
85
10
51
50
0
5
44
1.24
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15431119--15431167
23
2.1
23
100
0
98
48
8
12
30
1.69
15438845--15438876
15
2.1
15
94
0
55
46
3
0
50
1.17
15438982--15439014
15
2.2
15
94
0
57
45
0
3
51
1.16
15441511--15441550
21
1.9
21
85
10
55
15
15
25
45
1.84
15443565--15443611
22
2.1
22
88
7
69
21
8
17
53
1.70
15443646--15443693
23
2.0
25
88
8
73
22
6
0
70
1.09
15443660--15443761
27
3.7
26
69
22
66
21
4
1
71
1.15
15443716--15443768
26
2.0
27
85
3
72
18
1
5
73
1.12
15447430--15447468
20
2.0
20
84
0
51
51
20
5
23
1.67
15447708--15448067
41
8.6
41
78
9
210
52
11
5
31
1.59
15447831--15447999
90
1.9
90
85
2
234
53
10
4
30
1.56
15448097--15448189
32
3.2
31
67
28
85
52
11
5
30
1.60
15448078--15448196
56
2.1
56
90
3
186
54
11
4
29
1.55
15448103--15448183
12
7.1
12
72
10
62
53
13
6
27
1.63
15448239--15448312
20
3.7
20
85
1
94
52
12
4
31
1.57
15448318--15448363
16
2.9
16
76
0
56
54
6
8
30
1.56
15448300--15448363
32
2.0
33
87
3
94
51
7
7
32
1.59
15448983--15449018
12
2.8
13
87
4
56
72
5
2
19
1.17
15449503--15449528
13
2.0
13
100
0
52
38
7
23
30
1.83
15456325--15456365
21
2.0
20
90
4
64
51
7
14
26
1.69
15457492--15457551
29
2.1
27
82
11
68
51
10
6
31
1.61
15457650--15457711
24
2.6
24
85
7
81
56
9
0
33
1.32
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15457808--15457904
22
4.5
22
82
7
128
52
13
8
25
1.68
15457798--15458111
41
7.6
41
80
9
284
51
11
7
30
1.64
15457772--15458111
61
5.5
61
77
10
275
51
10
6
30
1.62
15457796--15458111
102
3.1
102
81
6
377
51
11
6
30
1.64
15457830--15458111
102
2.8
102
84
2
386
51
11
6
30
1.64
15458050--15458301
53
4.4
56
81
10
273
53
10
5
30
1.57
15458188--15458235
12
4.0
12
75
0
51
54
12
6
27
1.61
15458138--15458305
56
3.1
56
87
4
227
55
8
4
30
1.51
15458328--15458413
20
4.2
20
84
1
91
54
11
4
29
1.56
15458408--15458471
32
2.0
33
84
3
85
48
7
7
35
1.61
15458417--15458468
16
3.2
16
77
0
59
48
7
7
36
1.61
15458417--15458490
32
2.4
32
81
4
80
47
12
8
32
1.70
15458988--15459034
18
2.5
20
70
16
55
12
6
0
80
0.88
15459062--15459097
12
2.8
13
87
4
56
72
8
0
19
1.10
15460578--15460646
32
2.2
31
82
12
79
27
24
21
26
1.99
15460702--15460746
20
2.3
19
84
3
54
26
26
20
26
1.99
15461057--15461126
21
3.4
19
78
19
70
10
1
8
80
0.98
15461086--15461126
13
3.2
13
86
3
57
12
2
7
78
1.06
15461194--15461614
59
6.9
61
87
10
532
46
7
13
32
1.72
15461216--15461304
27
3.2
27
62
20
65
41
6
14
37
1.72
15466060--15466126
34
2.0
34
84
0
89
43
7
13
35
1.72
15466060--15466151
35
2.7
34
78
11
98
36
7
17
38
1.78
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15466927--15467289
178
2.0
178
80
7
398
35
15
11
37
1.83
15466743--15467651
303
3.0
302
79
6
944
34
15
12
37
1.85
15472274--15472300
2
13.5
2
100
0
54
51
0
0
48
1.00
15475644--15475692
26
1.9
26
84
12
66
53
2
0
44
1.12
15475955--15476005
2
25.5
2
100
0
102
49
0
0
50
1.00
15478615--15478758
76
1.9
78
85
2
202
32
10
25
31
1.90
15479019--15479078
29
2.1
29
81
12
70
40
5
0
55
1.22
15479450--15479567
58
2.1
57
87
7
168
49
7
23
19
1.74
15481017--15481075
16
3.7
16
79
0
64
25
1
22
50
1.58
15481105--15481138
17
2.0
17
88
0
50
11
0
32
55
1.36
15481161--15481221
17
3.7
16
81
12
70
16
4
27
50
1.65
15481194--15481295
49
2.1
49
83
3
125
24
5
19
50
1.70
15481243--15481285
8
5.4
8
80
0
50
20
0
23
55
1.43
15481033--15481285
16
15.7
16
70
11
79
21
3
25
49
1.65
15483767--15483822
24
2.3
23
84
6
67
3
12
5
78
1.05
15485097--15485158
26
2.3
27
83
8
81
37
12
12
37
1.82
15485637--15485683
21
2.1
21
81
14
51
12
17
2
68
1.31
15486897--15486946
22
2.2
23
86
10
68
4
12
2
82
0.90
15487457--15487496
7
6.3
7
78
21
52
0
12
0
87
0.54
15487457--15487497
6
6.7
6
91
8
57
0
14
0
85
0.60
15487461--15487496
17
2.1
17
94
5
63
0
11
0
88
0.50
15489849--15489884
16
2.3
16
90
4
56
8
22
2
66
1.31
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15491734--15491777
17
2.6
17
82
3
54
20
2
20
56
1.52
15491730--15492063
8
41.9
8
64
8
81
21
3
23
50
1.65
15491732--15491855
45
2.7
47
81
6
144
22
4
23
49
1.69
15491834--15491904
33
2.1
34
84
5
92
22
4
19
53
1.62
15491947--15492063
16
7.2
16
76
5
101
23
3
23
49
1.65
15492362--15492441
39
2.0
40
97
2
153
32
6
2
58
1.36
15497583--15497613
16
1.9
16
100
0
62
32
12
6
48
1.67
15497994--15498035
22
2.0
21
85
4
57
33
11
21
33
1.90
15499155--15499209
21
2.7
20
78
10
67
43
18
21
16
1.88
15508115--15508184
30
2.3
31
79
16
83
22
7
7
62
1.45

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130