Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168381.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_6, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26551601

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   

This is table  107  of  130  ( 15485 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20952340--20952369
2
15.0
2
100
0
60
50
0
0
50
1.00
20959140--20959224
20
4.3
20
74
14
77
14
1
62
22
1.38
20959522--20959585
26
2.4
27
76
7
69
20
3
9
67
1.33
20960003--20960031
10
2.9
10
100
0
58
58
0
0
41
0.98
20963218--20963253
6
6.0
6
96
0
54
22
0
44
33
1.53
20963184--20963235
27
1.9
27
84
7
70
26
5
36
30
1.80
20963605--20963653
18
2.7
18
80
0
62
36
28
4
30
1.76
20967181--20967242
27
2.3
27
94
0
106
37
0
4
58
1.20
20967193--20967245
14
3.9
14
73
14
56
35
0
3
60
1.15
20967184--20967255
27
2.7
27
89
2
101
34
1
4
59
1.25
20968231--20968271
2
20.5
2
94
0
73
0
46
0
53
1.00
20969672--20969714
22
2.0
21
86
8
61
46
20
4
27
1.71
20972325--20972379
6
9.2
6
89
0
74
43
0
1
54
1.10
20972325--20972379
8
6.9
8
89
0
74
43
0
1
54
1.10
20972325--20972379
14
3.9
14
90
0
74
43
0
1
54
1.10
20974774--20974811
15
2.8
13
82
17
51
15
7
7
68
1.37
20974780--20974816
15
2.6
14
91
8
65
10
10
5
72
1.25
20974822--20974876
16
3.3
16
75
14
58
65
0
5
29
1.15
20974824--20974870
17
2.9
16
75
15
51
68
0
6
25
1.13
20975215--20975346
65
2.1
64
91
2
212
56
6
13
22
1.61
20978826--20978878
17
3.1
16
83
8
61
86
0
7
5
0.69
20978831--20978878
21
2.4
19
89
10
69
85
0
8
6
0.74
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20979248--20979339
11
8.9
10
71
17
64
73
0
20
5
1.02
20980529--20980727
43
4.6
44
89
1
278
36
9
15
38
1.79
20980529--20980727
22
9.2
22
87
3
287
36
9
15
38
1.79
20980529--20980727
87
2.3
86
87
2
292
36
9
15
38
1.79
20980711--20980742
15
2.1
15
94
0
55
25
15
12
46
1.81
20980782--20980877
44
2.2
44
88
5
142
38
8
15
37
1.78
20981026--20981085
31
1.9
31
86
6
86
45
6
10
38
1.64
20981812--20981865
23
2.2
24
80
6
65
42
0
14
42
1.46
20982375--20982416
18
2.3
19
83
4
50
11
2
4
80
0.95
20982373--20982416
19
2.3
19
84
7
54
11
2
4
81
0.92
20982406--20982444
15
2.9
13
85
14
53
17
7
7
66
1.40
20990429--20990480
23
2.3
23
80
16
63
71
1
0
26
0.97
20990432--20990482
8
6.5
8
75
20
54
70
1
0
27
0.98
20990489--20990526
18
2.1
18
90
0
58
71
7
7
13
1.31
21010448--21010547
53
1.9
52
87
6
148
26
9
7
58
1.54
21012226--21012250
11
2.3
11
100
0
50
32
28
32
8
1.86
21012760--21012860
31
3.3
31
76
12
102
67
3
0
27
1.15
21012927--21012952
6
4.3
6
100
0
52
84
0
0
15
0.62
21012886--21012966
21
3.7
21
74
11
65
75
4
2
17
1.09
21014829--21014873
21
2.1
21
84
8
56
40
0
2
57
1.11
21018613--21018655
3
14.3
3
100
0
86
67
0
0
32
0.91
21018632--21019025
191
2.1
191
99
0
770
46
9
3
40
1.52
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21019761--21019803
3
14.3
3
100
0
86
67
0
0
32
0.91
21019849--21019880
17
1.9
17
93
6
57
59
6
12
21
1.55
21020362--21020436
32
2.4
33
86
8
111
46
9
8
36
1.65
21021055--21021117
32
2.0
32
87
0
90
46
12
6
34
1.68
21020516--21022020
670
2.3
660
87
4
2126
45
6
7
40
1.60
21021749--21021801
19
2.7
21
82
8
67
56
5
3
33
1.41
21022501--21022955
59
7.7
59
85
7
577
34
11
6
47
1.66
21022586--21022624
16
2.4
16
86
4
51
41
0
7
51
1.31
21022501--21022955
119
3.8
116
85
6
544
34
11
6
47
1.66
21022496--21022967
178
2.7
177
89
3
693
34
11
6
47
1.66
21022971--21023008
20
1.9
20
88
0
58
73
0
10
15
1.09
21022979--21023051
15
5.1
14
74
17
62
76
1
6
15
1.05
21022967--21023038
28
2.6
27
80
10
74
75
1
8
15
1.11
21022992--21023052
17
3.6
17
76
10
54
80
1
4
13
0.95
21023355--21023400
11
4.4
11
75
10
51
0
39
2
58
1.10
21024049--21024078
11
2.8
11
95
5
53
80
0
13
6
0.91
21024120--21024176
24
2.4
24
82
2
62
68
3
7
21
1.29
21024139--21024193
18
3.2
18
82
10
71
78
3
0
18
0.90
21024138--21024198
12
5.4
11
79
18
54
78
4
0
16
0.91
21024346--21024396
25
2.2
24
86
13
72
0
5
9
84
0.78
21024346--21024389
8
5.5
8
81
7
54
0
6
9
84
0.79
21024404--21024519
44
2.7
43
79
1
124
38
24
13
23
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21024510--21024561
25
2.1
25
100
0
104
30
23
19
26
1.98
21024535--21024709
41
4.2
41
96
0
323
34
24
18
22
1.96
21025946--21026037
12
7.9
12
66
20
52
8
14
1
76
1.08
21025958--21025983
8
3.2
8
100
0
52
11
11
0
76
1.01
21025958--21025996
16
2.4
16
86
4
51
12
15
0
71
1.14
21027141--21027174
15
2.3
15
94
0
59
85
0
8
5
0.75
21027210--21027291
25
3.2
25
80
3
74
69
3
6
20
1.26
21027235--21027291
12
4.4
12
77
14
51
73
3
1
21
1.07
21027250--21027290
22
1.9
21
85
5
55
78
2
2
17
0.98
21027438--21027466
8
3.6
8
100
0
58
0
0
10
89
0.48
21027474--21027618
43
3.4
42
79
7
150
35
22
17
23
1.95
21027564--21027673
55
2.0
55
92
3
186
35
23
19
21
1.96
21027618--21027779
41
3.9
41
93
3
272
38
22
16
22
1.93
21027618--21027779
83
2.0
82
93
3
281
38
22
16
22
1.93
21028019--21028048
14
2.1
14
93
0
51
33
16
20
30
1.94
21029019--21029108
7
13.1
7
70
21
50
10
17
1
71
1.20
21029035--21029102
26
2.6
27
75
11
70
8
16
1
73
1.15
21029042--21029095
16
3.6
16
78
21
62
7
14
1
75
1.09
21033032--21033122
27
3.2
26
71
23
85
38
14
5
41
1.69
21033032--21033542
59
8.7
58
84
5
625
35
11
6
46
1.67
21033117--21033155
16
2.4
16
86
4
51
41
0
7
51
1.31
21033028--21033542
118
4.4
116
85
4
692
35
11
6
46
1.68
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21033032--21033542
58
8.7
58
85
5
661
35
11
6
46
1.67
21033552--21033636
30
2.9
27
75
19
73
76
2
7
14
1.09
21033563--21033643
5
15.4
5
69
23
51
77
2
6
13
1.05
21033571--21033644
6
11.7
6
71
16
51
78
1
6
13
1.01
21033590--21033643
27
2.0
28
89
10
85
79
1
5
12
0.98
21033563--21033643
11
7.7
10
71
23
51
77
2
6
13
1.05
21033553--21033724
22
7.7
22
70
16
72
73
3
4
18
1.13
21033667--21033724
4
15.8
4
79
16
72
77
1
0
20
0.86
21033667--21033724
18
3.4
18
90
6
86
77
1
0
20
0.86
21034776--21034805
11
2.6
11
94
5
51
80
0
0
20
0.72
21036821--21036851
15
2.0
16
93
6
55
61
0
0
38
0.96
21036950--21036993
2
22.0
2
100
0
88
0
50
0
50
1.00
21037919--21037977
27
2.2
27
84
0
73
32
6
1
59
1.34
21039666--21039722
29
2.0
29
82
6
71
1
33
0
64
1.04
21040512--21040537
8
3.2
8
100
0
52
23
0
11
65
1.25
21040960--21041003
18
2.4
18
77
7
54
15
0
6
77
0.97
21040918--21041003
26
3.3
26
75
18
81
12
2
11
73
1.20
21041720--21041783
33
1.9
33
93
0
110
43
18
9
28
1.81
21042135--21042190
28
2.0
28
89
0
85
48
21
12
17
1.80
21041358--21042362
404
2.5
396
77
7
1033
42
16
11
29
1.83
21042396--21042594
107
1.9
107
84
4
267
41
16
11
30
1.84
21045068--21045103
8
4.4
8
86
6
54
11
0
2
86
0.68
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21045068--21045103
17
2.1
17
94
0
63
11
0
2
86
0.68
21047957--21048010
22
2.5
22
74
14
58
48
7
11
33
1.67
21051125--21051171
17
2.8
17
78
18
53
2
27
0
70
0.99
21051302--21051358
11
5.0
11
75
14
53
1
22
0
75
0.90
21051312--21051357
15
2.7
17
80
16
51
2
21
0
76
0.90
21055482--21055534
24
2.2
24
79
0
61
52
15
1
30
1.53
21057455--21057496
6
6.8
6
86
8
50
47
2
0
50
1.14
21059140--21059368
84
2.7
84
97
0
431
45
13
17
23
1.83
21062120--21062183
32
2.0
32
100
0
128
37
15
15
31
1.89
21076938--21077120
93
2.0
93
93
0
312
33
19
25
21
1.96

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130