Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168381.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_6, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26551601

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   

This is table  119  of  130  ( 15485 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23524206--23524252
22
2.2
22
85
7
62
46
0
4
48
1.21
23526368--23526407
20
2.0
21
85
5
55
47
0
2
50
1.14
23526517--23526551
8
4.5
8
92
3
54
42
0
0
57
0.99
23528142--23528170
14
2.1
14
93
6
51
34
10
0
55
1.34
23537290--23537341
26
2.0
25
82
10
61
21
0
3
75
0.97
23538981--23539048
17
3.9
17
84
3
91
33
7
19
39
1.79
23538983--23539049
35
1.9
35
93
3
118
31
7
19
41
1.79
23538989--23539060
35
2.1
35
86
5
101
36
6
16
40
1.76
23539170--23539239
21
3.3
21
71
2
59
41
8
12
37
1.74
23539140--23539322
46
4.1
43
77
10
140
40
10
11
37
1.77
23546829--23546862
15
2.3
15
94
0
59
61
2
5
29
1.34
23550738--23550890
74
2.1
75
86
3
211
28
29
13
29
1.94
23551937--23551980
22
2.0
22
95
0
79
43
9
11
36
1.72
23551940--23551992
22
2.4
22
84
6
54
49
5
11
33
1.62
23553152--23553195
22
2.0
22
86
8
63
31
11
11
45
1.76
23556852--23556934
2
42.0
2
97
2
159
0
0
49
50
1.00
23560422--23560455
2
17.0
2
93
0
59
47
0
52
0
1.00
23563037--23563206
91
1.9
90
92
3
288
40
18
8
32
1.81
23564387--23564418
2
16.0
2
100
0
64
50
0
0
50
1.00
23583880--23583925
4
11.5
4
85
0
56
56
0
2
41
1.11
23583880--23583925
6
7.7
6
85
0
56
56
0
2
41
1.11
23583880--23583925
10
4.6
10
86
0
56
56
0
2
41
1.11
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23588367--23588404
20
1.9
20
100
0
76
28
23
10
36
1.88
23590635--23590659
12
2.1
12
100
0
50
32
24
16
28
1.96
23594459--23594494
9
4.1
9
89
3
56
50
47
2
0
1.15
23594463--23594497
18
1.9
18
100
0
70
48
45
5
0
1.26
23607392--23607459
26
2.6
25
80
15
93
48
0
2
48
1.16
23607627--23607672
15
3.1
15
81
12
58
45
2
4
47
1.34
23607860--23607909
26
1.9
26
83
0
64
42
2
4
52
1.31
23607982--23608036
24
2.3
23
81
12
67
50
0
0
49
1.00
23609429--23609595
81
2.1
81
97
0
316
41
10
26
21
1.85
23609853--23610621
381
2.0
381
98
0
1484
34
15
24
24
1.95
23625200--23625265
28
2.4
28
92
0
114
34
12
7
45
1.70
23625421--23625460
21
1.9
21
85
10
55
70
0
10
20
1.16
23625607--23625671
33
2.0
33
90
0
103
30
10
16
41
1.83
23626925--23626975
22
2.3
23
80
16
63
33
5
1
58
1.33
23636660--23636700
21
2.0
21
85
0
55
43
4
0
51
1.23
23637852--23637892
17
2.3
17
87
8
55
7
4
17
70
1.28
23642583--23642626
17
2.6
17
92
0
70
50
2
4
43
1.35
23643701--23643775
33
2.3
32
81
6
89
50
6
2
40
1.43
23651440--23651547
15
7.0
15
72
6
90
24
51
12
11
1.72
23654694--23654745
21
2.4
21
83
3
59
57
9
5
26
1.53
23659135--23659189
24
2.3
25
78
12
62
56
1
0
41
1.10
23661289--23661353
27
2.4
26
77
7
67
29
40
23
7
1.82
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23661960--23661991
16
2.0
16
93
0
55
65
0
3
31
1.08
23662224--23662267
15
2.8
16
82
6
54
45
4
2
47
1.35
23674899--23675010
41
2.7
43
74
16
103
46
3
2
47
1.34
23675747--23675788
13
3.2
13
89
0
57
45
0
2
52
1.13
23676235--23676273
12
3.3
12
85
7
53
69
0
0
30
0.89
23676249--23676279
11
2.8
11
95
0
53
70
0
3
25
1.02
23676581--23676627
23
2.1
22
84
4
58
46
2
0
51
1.13
23676601--23676655
28
2.0
28
82
7
67
49
3
1
45
1.30
23678015--23678082
30
2.2
31
80
15
79
54
2
2
39
1.31
23689153--23689177
2
12.5
2
100
0
50
48
0
0
52
1.00
23692039--23692120
32
2.6
32
84
0
101
41
4
6
47
1.50
23699113--23699138
2
13.0
2
100
0
52
50
0
0
50
1.00
23725724--23725761
16
2.5
15
87
8
51
44
7
0
47
1.32
23726566--23726609
3
14.7
3
100
0
88
68
0
0
31
0.90
23733823--23733896
34
2.2
34
85
9
98
60
4
1
33
1.24
23741032--23741144
56
2.0
55
91
1
181
43
16
15
23
1.87
23746086--23746139
17
3.1
17
80
17
65
53
3
0
42
1.18
23747551--23747595
21
2.1
21
84
8
56
46
0
6
46
1.29
23752309--23752349
2
21.0
2
85
14
59
51
0
2
46
1.14
23752311--23752351
20
2.0
20
100
0
82
51
0
4
43
1.23
23755705--23755741
12
3.2
12
84
7
58
72
0
0
27
0.84
23786098--23786436
110
3.1
110
98
0
642
22
26
27
23
2.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23788310--23788369
27
2.2
27
82
11
70
21
3
10
65
1.38
23788310--23788374
28
2.4
26
82
12
69
21
3
9
66
1.34
23792571--23792603
6
5.3
6
92
7
57
15
0
0
84
0.61
23792571--23792611
19
2.2
19
86
0
55
19
2
0
78
0.87
23793009--23793057
23
2.1
23
88
7
73
6
10
0
83
0.80
23793013--23793053
21
2.0
21
95
0
73
2
12
0
85
0.70
23793107--23793179
3
23.7
3
89
10
112
34
0
0
65
0.93
23795652--23796052
59
6.8
58
85
6
506
44
7
13
34
1.73
23795648--23796052
116
3.5
115
90
5
591
44
7
13
34
1.73
23795652--23796052
175
2.3
174
89
5
612
44
7
13
34
1.73
23796729--23796792
26
2.4
27
79
10
78
51
7
0
40
1.31
23808395--23808428
3
11.3
3
100
0
68
67
0
0
32
0.91
23808901--23808942
14
3.0
15
86
10
54
35
0
2
61
1.09
23809476--23809559
27
3.0
27
80
13
91
44
1
3
51
1.26
23809959--23810005
25
1.9
24
83
12
60
21
4
6
68
1.30
23811133--23811426
60
4.9
61
76
12
211
38
10
4
46
1.59
23811182--23811426
58
4.1
60
78
9
225
38
10
4
46
1.58
23811133--23811427
122
2.5
118
79
8
289
38
10
4
46
1.59
23811409--23811442
14
2.4
14
90
0
59
38
0
2
58
1.13
23811351--23811500
71
2.1
73
88
2
223
36
8
5
49
1.56
23811594--23811634
12
3.2
12
86
10
55
78
0
0
21
0.76
23812580--23812890
45
7.1
44
75
7
274
45
17
13
23
1.83
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23812580--23812890
89
3.5
87
80
6
299
45
17
13
23
1.83
23813675--23813720
20
2.3
20
80
0
56
10
10
2
76
1.12
23813705--23813735
10
3.0
10
95
4
53
22
0
0
77
0.77
23815141--23815190
26
2.0
25
84
11
66
30
8
0
62
1.24
23817887--23817930
22
1.9
22
81
9
52
9
4
18
68
1.34
23819447--23819515
29
2.3
29
78
9
77
44
4
7
43
1.51
23819523--23819565
21
2.0
21
90
0
68
60
6
0
32
1.23
23821501--23821532
3
10.3
3
93
6
55
68
0
0
31
0.90
23822005--23822046
14
3.0
15
86
10
54
35
0
2
61
1.09
23822576--23822653
29
2.7
27
81
15
86
44
0
3
51
1.19
23822584--23822653
29
2.3
29
88
9
97
47
0
2
50
1.16
23823074--23823120
25
1.9
24
83
12
60
21
4
6
68
1.30
23824273--23824566
60
4.9
61
77
11
211
37
11
4
46
1.60
23824322--23824566
62
4.1
61
77
11
229
37
10
4
47
1.59
23824273--23824567
122
2.5
119
79
8
291
37
11
4
46
1.60
23824318--23824566
60
4.2
59
78
9
222
38
10
4
46
1.58
23824549--23824582
14
2.4
14
90
0
59
38
0
2
58
1.13
23824492--23824640
71
2.1
72
88
3
221
36
8
5
49
1.57
23824648--23824698
26
2.0
26
84
0
66
72
5
1
19
1.15
23824710--23824757
21
2.3
21
78
7
53
72
8
0
18
1.08
23824739--23824775
12
3.0
13
80
15
51
78
0
0
21
0.75
23825721--23826027
45
7.0
44
78
8
261
45
17
12
23
1.83
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23825761--23826031
44
6.2
44
76
9
268
47
16
11
23
1.80
23825767--23826031
89
3.0
88
79
9
274
47
16
12
23
1.81
23826465--23826503
20
2.0
20
85
10
53
25
12
25
35
1.92
23826811--23826871
10
6.0
10
77
9
52
13
9
3
73
1.20
23826839--23826876
10
3.7
10
92
3
58
21
2
0
76
0.91
23827242--23827267
9
2.9
9
100
0
52
76
0
0
23
0.78
23829524--23829560
11
2.9
14
76
23
53
48
0
0
51
1.00
23831416--23831470
19
2.9
19
74
12
60
25
9
0
65
1.22
23832620--23832688
29
2.3
29
78
9
77
44
4
7
43
1.51
23832696--23832738
21
2.0
21
90
0
68
60
6
0
32
1.23

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130