Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168381.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_6, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26551601

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   

This is table  83  of  130  ( 15485 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16585804--16585865
31
2.0
31
93
3
108
35
0
0
64
0.94
16585819--16585865
14
2.9
17
75
18
64
34
0
0
65
0.93
16586565--16586604
20
1.9
22
90
10
66
42
0
5
52
1.23
16587507--16587587
36
2.2
36
82
4
92
18
3
29
48
1.65
16587626--16587667
21
2.0
21
90
0
66
21
4
23
50
1.68
16587690--16587927
20
11.6
19
68
15
93
15
6
28
48
1.70
16600952--16600980
11
2.6
11
100
0
58
48
6
6
37
1.57
16600964--16601001
19
2.0
19
85
10
51
39
5
7
47
1.55
16601564--16601922
189
1.9
192
81
7
437
45
7
10
37
1.66
16605660--16605707
24
2.0
24
83
0
60
66
2
25
6
1.26
16606073--16606144
6
12.0
6
76
16
60
80
0
15
4
0.86
16606073--16606164
8
11.2
8
71
15
55
78
0
16
5
0.93
16606077--16606117
19
2.2
19
95
0
73
87
0
12
0
0.53
16606064--16606131
30
2.2
32
84
7
86
80
0
14
4
0.85
16606077--16606153
20
3.7
21
75
14
61
80
0
14
5
0.87
16606134--16606184
17
3.0
16
73
21
50
68
0
19
11
1.20
16606134--16606184
8
6.0
8
78
15
50
68
0
19
11
1.20
16607035--16607078
23
1.9
23
90
0
70
45
4
22
27
1.72
16607579--16607625
22
2.1
22
84
11
60
38
17
12
31
1.87
16607813--16608025
42
5.1
41
84
3
257
22
11
20
45
1.83
16607814--16608056
83
2.9
83
84
1
299
23
12
20
43
1.85
16609132--16609179
25
1.9
25
83
8
62
47
4
8
39
1.53
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16609128--16609469
185
1.8
185
84
6
469
46
8
8
36
1.65
16610455--16610521
27
2.5
28
80
11
86
37
0
7
55
1.28
16610563--16610605
16
2.7
16
75
13
52
37
0
2
60
1.10
16618397--16618453
17
3.5
16
83
13
64
3
19
0
77
0.92
16618407--16618450
15
2.9
16
86
10
65
4
18
0
77
0.94
16618397--16618454
16
3.7
15
86
9
71
5
18
0
75
0.98
16618727--16618823
34
2.9
34
87
1
133
35
12
15
37
1.85
16619473--16619527
21
2.7
21
74
2
58
21
21
10
45
1.82
16622485--16622530
21
2.1
22
84
4
58
65
0
0
34
0.93
16623573--16623932
47
7.8
46
73
14
192
43
17
11
27
1.83
16623774--16623841
33
2.1
32
86
8
93
47
17
10
25
1.79
16623804--16623933
49
2.7
49
79
4
149
42
20
10
26
1.85
16623668--16623922
127
2.0
125
81
6
296
44
18
11
25
1.83
16624192--16624328
42
3.5
41
70
19
121
38
21
18
21
1.93
16624129--16624646
75
6.8
74
80
6
491
40
21
15
22
1.90
16624351--16624642
42
7.4
41
75
13
229
40
22
15
21
1.90
16624232--16624513
33
7.7
33
67
22
109
39
22
17
20
1.92
16624129--16624553
225
1.9
226
85
2
595
40
21
15
21
1.91
16625014--16625103
35
2.6
34
85
5
119
34
11
15
38
1.83
16625994--16626020
1
27.0
1
100
0
54
0
0
0
100
0.00
16629322--16629360
16
2.4
16
73
0
51
28
0
7
64
1.21
16630538--16630587
25
2.0
25
84
4
64
26
2
8
64
1.32
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16632012--16632054
16
2.5
17
81
7
52
16
2
4
76
1.05
16632356--16632413
9
6.1
10
75
20
54
75
0
20
3
0.94
16632364--16632426
17
3.9
17
76
19
62
74
0
17
7
1.05
16632357--16632399
23
1.9
22
86
13
61
74
0
20
4
1.00
16638210--16638469
124
2.1
124
87
1
369
36
14
10
38
1.81
16637813--16638346
186
2.9
186
84
1
674
36
12
10
39
1.78
16638019--16638655
310
2.1
310
88
0
952
36
13
10
39
1.79
16638263--16638463
63
3.2
62
65
18
146
37
14
12
35
1.84
16637828--16638995
496
2.4
497
86
0
1622
35
13
10
39
1.80
16638335--16638841
186
2.7
185
91
1
782
35
14
10
39
1.81
16638721--16638974
124
2.0
124
88
5
372
34
13
12
39
1.82
16642723--16642792
35
2.0
35
82
0
86
35
14
12
37
1.84
16643164--16643626
244
1.9
244
79
3
529
37
13
12
36
1.82
16645217--16645252
19
1.9
19
88
5
56
5
2
25
66
1.27
16647040--16647084
21
2.1
21
87
0
63
22
2
28
46
1.63
16647369--16647405
2
18.5
2
100
0
74
48
0
0
51
1.00
16647671--16647954
152
1.9
153
90
5
459
41
6
4
46
1.50
16650181--16650214
17
2.0
17
88
11
52
8
14
5
70
1.31
16650543--16650800
22
11.9
22
68
8
107
51
3
9
35
1.52
16651121--16651654
22
24.1
22
70
12
229
49
6
9
34
1.61
16651679--16651761
22
3.8
22
81
7
107
43
2
10
43
1.52
16651692--16651776
44
1.9
44
90
4
136
43
5
9
41
1.61
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16651748--16651797
22
2.3
21
79
3
55
46
6
10
38
1.62
16651691--16651797
44
2.4
44
82
14
132
43
4
11
40
1.61
16651818--16651895
22
3.6
21
78
11
68
44
7
5
42
1.55
16651859--16651926
32
2.1
32
97
0
127
48
1
5
44
1.36
16651818--16651967
76
2.0
76
83
7
189
46
6
5
41
1.53
16651893--16652011
44
2.7
44
84
5
134
47
6
5
39
1.54
16651881--16652002
22
5.7
21
80
7
86
48
6
4
40
1.48
16651907--16652011
22
4.8
22
83
2
113
47
7
4
40
1.53
16651859--16651967
11
10.1
10
71
14
74
48
3
5
42
1.44
16651907--16652025
22
5.4
21
79
7
87
47
6
5
40
1.54
16652276--16652372
22
4.3
22
76
3
86
47
7
8
37
1.61
16652287--16652362
22
3.4
23
81
3
93
51
6
6
35
1.54
16652559--16652663
22
4.8
22
79
9
63
51
8
2
37
1.47
16652566--16652671
44
2.4
43
78
7
115
51
7
3
36
1.48
16652685--16652744
22
2.7
23
72
23
56
41
1
10
46
1.47
16652841--16652901
24
2.5
24
81
5
70
40
3
14
40
1.62
16656417--16656455
20
2.0
19
85
5
51
46
7
0
46
1.31
16657213--16657263
25
2.0
25
92
0
84
66
0
27
5
1.14
16658177--16658230
8
6.5
8
87
8
63
42
9
0
48
1.35
16658183--16658234
6
8.7
6
86
0
68
42
7
0
50
1.31
16658183--16658234
4
13.0
4
87
0
68
42
7
0
50
1.31
16660333--16660374
21
2.1
21
86
8
61
57
0
0
42
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16661622--16661724
16
6.6
16
67
26
60
49
0
0
48
1.14
16661612--16661678
26
2.7
26
88
6
104
49
0
1
49
1.10
16661611--16661678
9
8.0
9
73
18
65
50
0
1
48
1.10
16661653--16661741
18
5.2
17
76
17
69
52
1
0
46
1.07
16661772--16661951
15
11.5
15
68
20
86
40
0
3
56
1.20
16661774--16661831
23
2.8
22
85
12
70
43
0
1
55
1.10
16661836--16661883
22
2.0
25
88
11
75
39
0
6
54
1.26
16661772--16661952
55
3.5
55
77
13
168
40
0
3
55
1.20
16661796--16661908
13
8.8
12
69
21
54
38
0
4
56
1.19
16661772--16661952
18
10.3
18
70
18
116
40
0
3
55
1.20
16661864--16661945
31
2.7
31
75
9
87
37
1
2
58
1.19
16667485--16667514
15
2.0
15
100
0
60
46
13
13
26
1.80
16668516--16668581
31
2.1
31
97
0
123
42
6
6
45
1.53
16675286--16675528
4
61.8
4
66
16
73
28
3
2
65
1.23
16675351--16675500
25
6.3
24
78
14
127
32
4
2
62
1.25
16675401--16675511
42
2.5
44
85
7
145
32
4
0
62
1.22
16675327--16675511
45
4.1
42
73
20
135
31
3
2
62
1.27
16675402--16675537
20
6.4
20
72
19
98
31
5
0
62
1.22
16675463--16675515
17
3.1
17
81
13
56
30
3
0
66
1.10
16675380--16675530
67
2.3
67
80
14
172
31
4
1
62
1.24
16675818--16675868
27
1.9
26
84
4
66
23
0
15
60
1.35
16676385--16676469
4
22.0
4
77
15
58
23
0
3
72
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16676433--16676479
5
9.4
5
86
13
62
19
0
0
80
0.70
16676432--16676479
11
4.2
11
84
10
69
18
0
0
81
0.70
16676434--16676484
14
3.6
14
82
17
61
19
0
0
80
0.71
16676387--16676483
34
3.2
29
66
20
56
22
0
3
74
0.96
16676386--16676484
11
8.2
12
71
21
66
22
0
3
74
0.95
16679704--16679734
15
2.1
15
93
0
53
19
29
6
45
1.75
16685285--16685366
40
2.0
40
95
0
146
37
14
12
35
1.84
16685410--16685483
36
2.1
36
100
0
148
44
5
21
28
1.74
16686978--16687043
25
2.6
25
79
15
75
75
0
15
9
1.03
16687007--16687049
9
5.0
9
80
11
54
76
0
13
9
1.01

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130