Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168381.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_6, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26551601

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   

This is table  70  of  130  ( 15485 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14590769--14590800
15
2.1
16
94
5
57
18
18
6
56
1.62
14598007--14598073
8
7.7
9
91
8
104
79
0
10
10
0.95
14598007--14598074
35
1.9
35
96
3
127
79
0
10
10
0.94
14598007--14598072
19
3.8
17
90
9
107
78
0
10
10
0.96
14598007--14598084
36
2.1
38
90
9
126
78
0
11
10
0.97
14599088--14599296
42
5.0
42
84
5
228
23
16
21
39
1.92
14599509--14599591
6
13.5
6
74
18
64
21
1
1
75
0.93
14599508--14599583
31
2.4
30
82
8
107
22
1
1
75
0.96
14599508--14599556
19
2.6
19
83
6
64
18
2
2
77
0.96
14599719--14599796
22
3.6
21
78
16
70
24
5
7
62
1.42
14599752--14599827
21
3.6
22
72
20
56
17
3
7
71
1.26
14600685--14600769
5
17.6
5
74
16
81
16
3
2
77
1.01
14600678--14600774
30
3.4
28
81
14
108
16
6
2
75
1.10
14600786--14601296
58
8.8
58
85
5
689
45
8
12
33
1.71
14600774--14601296
116
4.5
116
91
2
815
46
8
12
33
1.70
14601259--14601315
26
2.2
26
87
0
78
36
8
15
38
1.79
14601266--14601323
26
2.2
27
93
6
109
41
10
13
34
1.79
14601210--14601382
86
2.0
83
91
5
276
43
10
12
34
1.76
14601293--14601616
60
5.4
58
81
12
361
45
7
12
34
1.70
14601293--14601616
122
2.7
118
85
9
408
45
7
12
34
1.70
14603429--14603569
62
2.3
63
82
2
167
35
15
11
37
1.84
14603918--14604001
36
2.4
36
82
6
100
21
21
7
50
1.72
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14604012--14604109
35
2.8
35
77
1
106
16
20
16
46
1.83
14604300--14604457
36
4.5
36
71
7
108
20
15
10
53
1.71
14604499--14604540
12
3.5
12
83
0
57
83
16
0
0
0.65
14612467--14612523
5
10.4
5
83
10
53
21
0
3
75
0.95
14612487--14612523
12
3.4
11
92
7
58
24
0
2
72
0.97
14612483--14612523
6
7.3
6
91
2
52
24
0
2
73
0.96
14612518--14612673
7
21.4
7
67
22
56
32
4
2
60
1.30
14612554--14612657
20
5.1
20
68
23
65
34
2
2
59
1.27
14612649--14612689
15
2.8
15
88
3
57
26
4
2
65
1.25
14613032--14613065
12
2.8
12
81
0
50
17
0
14
67
1.23
14613503--14613529
10
2.7
10
100
0
54
18
29
40
11
1.85
14613522--14613551
15
2.1
14
93
6
51
10
36
26
26
1.88
14613621--14613674
9
5.3
10
88
11
67
29
0
1
68
1.00
14613637--14613665
3
9.7
3
100
0
58
31
0
0
68
0.89
14618700--14618756
19
3.0
19
100
0
114
26
15
36
21
1.93
14622752--14622818
6
11.7
6
78
21
65
73
0
14
11
1.11
14622745--14622813
19
3.5
20
75
24
74
72
0
14
13
1.12
14622752--14622818
10
5.8
11
80
18
59
73
0
14
11
1.11
14622745--14622828
24
3.5
24
77
22
79
75
0
14
10
1.06
14622784--14622813
9
3.2
9
90
9
51
80
0
10
10
0.92
14622745--14622795
6
7.4
7
89
10
63
70
0
15
13
1.17
14622750--14622843
25
3.7
26
73
21
76
74
0
14
10
1.07
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14622786--14622843
24
2.4
24
83
11
75
77
0
13
8
0.98
14623856--14624047
40
4.6
40
77
11
136
28
14
18
38
1.90
14623927--14624268
46
7.9
46
77
11
257
27
14
17
40
1.89
14623972--14624214
79
3.0
79
75
15
251
28
15
16
39
1.90
14623908--14624214
166
1.8
166
92
1
517
28
15
17
39
1.90
14624140--14624229
43
2.1
42
85
6
119
27
14
16
41
1.87
14624062--14624253
89
2.2
86
84
4
233
26
14
19
39
1.90
14624454--14624509
15
3.7
15
80
15
71
21
0
0
78
0.75
14624451--14624590
24
5.8
24
71
17
94
27
1
0
70
1.01
14624446--14624677
44
5.4
44
75
14
157
29
3
1
65
1.17
14624524--14624651
48
2.7
46
80
12
116
34
3
2
60
1.25
14624446--14624596
4
37.5
4
71
20
84
27
1
0
69
1.04
14624451--14624677
18
11.7
19
69
22
75
29
2
1
65
1.16
14624654--14624711
15
3.8
15
81
6
64
27
5
1
65
1.23
14625657--14625685
5
5.8
5
100
0
58
17
0
0
82
0.66
14625700--14626046
63
5.7
63
88
2
435
45
4
12
37
1.63
14635645--14635671
14
1.9
14
100
0
54
37
0
3
59
1.15
14635558--14635951
59
6.7
59
84
6
455
34
12
7
44
1.72
14635560--14635951
119
3.3
116
87
4
518
34
12
7
44
1.71
14635837--14635933
32
3.2
32
62
24
82
31
13
12
42
1.81
14635558--14635972
178
2.4
175
85
7
556
35
12
8
44
1.71
14635968--14636043
13
6.2
12
71
22
52
77
1
5
15
1.01
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14635964--14636057
16
6.1
16
77
15
92
75
2
6
15
1.10
14635968--14636057
5
17.6
5
74
17
78
75
2
5
16
1.09
14635968--14636043
26
3.0
26
81
11
77
77
1
5
15
1.01
14636457--14636507
19
2.7
19
96
0
93
25
13
13
47
1.80
14636950--14636974
13
1.9
13
100
0
50
88
0
0
12
0.53
14636968--14637007
15
2.7
14
81
11
53
70
5
7
17
1.30
14636985--14637028
21
2.0
22
86
4
63
70
4
4
20
1.23
14637080--14637105
3
8.7
3
100
0
52
69
0
0
30
0.89
14637143--14637256
6
19.2
6
70
15
51
77
2
3
16
1.03
14637187--14637256
11
6.2
11
79
11
79
80
0
2
17
0.84
14637143--14637255
45
2.3
49
81
11
128
76
2
3
16
1.03
14637218--14637250
15
2.1
16
94
5
59
87
0
0
12
0.53
14637145--14637258
28
3.9
28
72
17
88
78
2
3
15
1.01
14637218--14637250
8
4.2
8
92
7
59
87
0
0
12
0.53
14637408--14637450
1
43.0
1
80
0
50
0
0
9
90
0.45
14637459--14637712
41
6.1
41
89
1
292
37
22
16
23
1.93
14638709--14638756
17
2.6
18
87
12
62
12
10
0
77
1.00
14638709--14638756
9
5.1
9
87
12
62
12
10
0
77
1.00
14647909--14648103
104
1.9
105
83
5
261
34
17
13
33
1.89
14648120--14648212
32
2.9
31
79
6
105
22
17
23
36
1.94
14648686--14648752
26
2.6
25
75
11
64
32
11
16
38
1.85
14649886--14649916
16
1.9
16
93
0
53
0
12
6
80
0.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14649893--14650258
147
2.5
147
79
4
371
20
16
10
52
1.72
14650032--14650474
149
2.9
149
78
9
398
20
17
9
52
1.72
14650032--14650421
149
2.6
149
81
5
403
20
17
9
53
1.71
14658576--14658634
9
6.6
9
77
14
50
6
16
0
76
1.00
14658576--14658630
21
2.8
20
77
22
62
7
16
0
76
1.00
14661268--14661302
16
2.2
16
94
0
61
42
11
14
31
1.81
14667721--14667779
19
3.1
19
72
11
57
32
11
20
35
1.89
14668122--14668171
18
2.7
19
81
6
66
16
2
8
74
1.15
14669108--14669143
12
3.1
12
88
8
56
5
22
0
72
1.05
14669089--14669161
11
6.6
11
80
10
60
4
23
0
72
1.01
14670994--14671030
14
2.6
14
91
0
65
40
0
0
59
0.97
14670978--14671030
13
4.1
12
79
11
52
41
3
1
52
1.30
14671419--14671495
37
2.1
37
87
0
109
32
15
15
36
1.89
14672824--14672848
13
1.9
13
100
0
50
60
0
0
40
0.97
14673375--14673447
25
2.8
25
83
4
74
64
2
1
31
1.16
14673412--14673451
16
2.5
17
84
8
57
72
0
0
27
0.85
14674115--14674216
13
7.8
13
68
15
50
68
4
3
22
1.25
14675130--14675177
20
2.4
20
86
6
62
52
0
0
47
1.00
14675139--14675212
33
2.2
33
88
4
105
51
1
1
45
1.18
14677453--14677488
18
1.9
18
88
5
54
63
2
0
33
1.08
14677453--14677500
22
2.2
22
88
3
71
64
2
0
33
1.05
14677462--14677508
22
2.1
22
84
7
60
57
2
4
36
1.30
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14677554--14677584
16
1.9
16
100
0
62
45
0
9
45
1.36
14677599--14677696
15
7.0
15
74
13
84
55
2
0
42
1.11
14677607--14677696
8
11.9
8
70
15
66
54
2
0
43
1.12
14677594--14677696
21
5.0
21
74
18
81
54
1
0
43
1.11
14677607--14677709
21
4.8
21
80
14
70
57
1
0
40
1.10
14677721--14677767
18
2.5
19
83
10
53
46
2
0
51
1.13
14677703--14677811
15
6.6
16
69
21
57
45
0
0
52
1.13
14677782--14677866
25
3.3
25
78
14
84
48
2
0
49
1.14
14677733--14677858
36
3.2
39
76
18
102
47
2
0
50
1.14
14677903--14677977
27
2.8
26
80
7
80
45
0
0
54
0.99

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130