Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168381.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_6, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26551601

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   

This is table  48  of  130  ( 15485 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11223708--11223770
32
2.0
32
84
12
85
46
0
6
47
1.28
11224202--11224248
23
2.0
23
83
0
58
51
0
0
48
1.00
11224470--11224537
24
2.9
23
80
10
75
44
1
2
51
1.25
11224528--11224659
14
10.0
13
65
27
57
46
1
1
50
1.19
11224517--11224559
14
3.1
14
80
16
54
41
0
0
58
0.98
11224611--11224658
18
2.7
18
78
9
53
52
0
0
47
1.00
11224986--11225039
19
2.7
19
76
15
56
53
1
0
44
1.11
11225366--11225398
12
2.8
12
100
0
66
30
9
0
60
1.27
11225475--11225522
21
2.3
21
86
13
73
47
0
0
52
1.00
11225644--11225677
15
2.3
15
90
10
52
44
2
0
52
1.16
11225637--11225677
22
1.9
21
85
5
55
41
2
0
56
1.13
11225689--11225741
18
2.9
18
81
13
63
47
3
0
49
1.19
11225729--11225812
11
7.0
13
69
27
53
51
0
1
47
1.08
11225687--11225812
18
6.9
17
68
22
55
50
1
0
47
1.16
11225982--11226026
18
2.7
15
83
16
54
55
0
2
42
1.12
11226085--11226161
26
3.0
24
70
18
59
50
3
1
44
1.28
11226358--11226413
13
4.2
13
77
8
51
46
1
0
51
1.11
11226354--11226431
41
1.9
41
84
10
106
48
1
1
48
1.17
11226513--11226563
22
2.3
22
75
18
52
45
1
3
49
1.32
11226530--11226580
18
2.8
18
77
13
52
41
5
3
49
1.45
11226912--11226972
26
2.4
26
76
13
63
39
1
3
55
1.26
11227112--11227152
15
2.9
15
85
7
59
46
0
0
53
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11227105--11227171
25
2.6
25
81
6
73
47
0
1
50
1.10
11227111--11227171
32
1.9
32
83
12
81
45
0
1
52
1.10
11227135--11227222
22
3.7
23
72
17
74
47
2
1
48
1.21
11227135--11227214
6
13.5
6
70
17
51
47
2
1
48
1.23
11227585--11227650
26
2.5
27
76
16
75
36
0
4
59
1.18
11227740--11228263
177
2.9
177
79
6
509
39
7
10
42
1.68
11227740--11228282
182
3.0
174
79
8
545
39
6
11
42
1.67
11229537--11229589
22
2.4
22
84
12
65
37
1
11
49
1.50
11229709--11229775
18
3.8
17
70
26
50
49
4
2
43
1.38
11229862--11229939
32
2.3
32
85
10
95
50
7
1
41
1.39
11230035--11230066
16
2.0
16
93
0
55
43
0
3
53
1.16
11230231--11230321
22
4.2
21
71
19
71
52
0
1
46
1.07
11230365--11230429
23
3.0
21
77
20
55
50
1
0
47
1.10
11230349--11230425
37
2.2
34
79
11
84
50
1
0
48
1.09
11230821--11230858
17
2.2
17
86
9
51
42
0
2
55
1.14
11232454--11232486
16
2.1
16
100
0
66
48
0
0
51
1.00
11232511--11232557
18
2.7
17
78
21
53
40
2
2
55
1.24
11232550--11232586
20
1.9
18
89
10
56
45
2
5
45
1.40
11233154--11233270
24
4.9
24
73
17
102
47
1
2
47
1.25
11233171--11233260
40
2.3
39
81
9
94
48
2
1
47
1.21
11233174--11233270
9
10.6
9
67
23
51
48
2
1
48
1.20
11233501--11233527
11
2.5
11
100
0
54
62
0
0
37
0.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11233766--11233799
16
2.0
16
88
11
50
44
0
0
55
0.99
11233772--11233815
19
2.2
19
84
8
52
43
2
0
54
1.12
11233778--11233870
15
6.5
14
71
21
61
45
3
0
51
1.17
11233882--11233925
21
2.1
21
91
0
70
56
2
0
40
1.11
11233889--11233925
17
2.1
17
90
5
56
56
0
0
43
0.99
11234128--11234193
11
5.6
13
70
21
56
50
0
0
50
1.00
11234119--11234191
23
3.2
23
74
12
62
47
1
0
50
1.09
11234116--11234207
34
2.5
36
77
13
98
44
2
0
53
1.12
11234227--11234259
14
2.2
16
89
10
52
48
0
0
51
1.00
11234731--11234764
11
3.0
11
95
4
59
47
0
0
52
1.00
11234747--11234789
19
2.4
19
88
7
63
41
2
0
55
1.12
11234758--11234796
19
2.0
20
95
5
71
41
5
0
53
1.23
11234733--11234788
11
5.0
12
76
23
52
44
1
0
53
1.11
11235022--11235067
20
2.3
21
81
11
60
52
0
0
47
1.00
11235228--11235270
19
2.2
20
87
4
61
51
0
4
44
1.22
11235345--11235399
25
2.2
25
84
9
69
49
0
1
49
1.11
11235501--11235547
14
3.1
15
81
9
51
40
0
2
57
1.11
11235634--11235722
22
4.2
23
76
12
68
47
2
2
48
1.26
11235974--11236041
32
2.2
30
79
12
75
51
2
1
44
1.25
11236391--11236455
27
2.3
28
79
12
71
52
0
4
43
1.22
11236439--11236492
22
2.5
22
82
11
58
50
0
0
50
1.00
11236427--11236492
23
2.8
23
79
6
71
51
0
0
48
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11236536--11236586
20
2.5
20
83
0
66
47
1
0
50
1.12
11236545--11236655
15
7.3
15
71
20
63
52
0
0
46
1.06
11236550--11236636
20
4.2
20
76
16
72
51
1
0
47
1.08
11236543--11236610
35
2.0
33
82
5
82
50
1
0
48
1.10
11236597--11236656
32
1.9
31
86
10
86
53
0
0
46
1.00
11236561--11236671
47
2.3
47
76
18
111
53
0
0
46
1.00
11236598--11236680
15
5.5
15
74
16
64
54
0
1
44
1.08
11236558--11236738
57
3.3
55
76
17
139
50
0
1
48
1.12
11236654--11236709
23
2.7
20
73
21
53
46
1
1
50
1.22
11237146--11237195
17
3.1
17
80
11
52
52
0
0
48
1.00
11237145--11237205
26
2.4
25
82
12
72
49
0
0
50
1.00
11237146--11237235
10
10.1
9
70
23
50
54
0
0
45
0.99
11238168--11238229
26
2.4
25
76
7
61
48
4
0
46
1.23
11238266--11238327
17
3.6
18
79
14
69
46
0
1
51
1.10
11238273--11238330
21
2.7
21
82
12
57
48
0
1
50
1.11
11238378--11238476
47
2.1
47
81
7
112
43
2
2
52
1.24
11238393--11238510
34
3.5
34
80
11
129
47
1
0
50
1.17
11238445--11238499
15
3.7
15
83
9
60
50
1
0
47
1.11
11238464--11238510
15
3.2
15
85
8
53
55
0
0
44
0.99
11238466--11238507
20
2.1
20
95
0
75
57
0
0
42
0.99
11239061--11239128
28
2.4
29
82
9
86
42
0
4
52
1.21
11239127--11239209
24
3.7
23
69
19
75
48
2
2
46
1.28
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11239278--11239333
29
1.9
29
82
13
71
46
3
3
46
1.37
11239290--11239348
27
2.2
26
80
16
68
44
5
3
47
1.42
11239355--11239440
35
2.5
35
82
0
100
40
10
12
36
1.78
11239792--11239869
28
2.9
28
87
11
101
47
0
1
51
1.09
11240257--11240288
14
2.1
16
88
11
50
43
3
0
53
1.16
11240397--11240449
24
2.2
24
87
9
74
49
3
0
47
1.19
11240458--11240497
7
6.0
7
82
11
57
55
0
0
45
0.99
11240451--11240503
19
2.7
20
88
11
83
54
0
0
45
0.99
11240523--11240593
28
2.7
27
85
10
85
47
0
2
49
1.16
11240523--11240593
13
5.4
13
79
15
83
47
0
2
49
1.16
11240812--11240868
16
3.5
16
75
13
53
50
1
3
43
1.29
11240810--11240910
33
3.1
31
75
14
80
51
1
1
44
1.24
11241182--11241245
20
3.3
19
76
20
60
50
4
1
43
1.32
11241339--11241387
20
2.5
20
86
0
62
44
2
0
53
1.12
11241482--11241524
12
3.8
11
82
11
52
46
2
0
51
1.13
11241541--11241600
22
2.6
22
80
17
68
45
5
1
48
1.34
11241818--11241874
10
5.4
10
78
12
60
56
0
0
43
0.99
11242515--11242620
54
1.9
54
83
12
137
43
0
4
51
1.22
11242964--11243017
25
2.0
28
82
10
69
55
0
0
44
0.99
11243358--11243466
24
4.5
24
67
19
75
44
0
2
52
1.21
11243366--11243407
16
2.6
16
85
10
59
42
0
0
57
0.99
11243358--11243409
11
4.5
11
75
17
52
44
1
0
53
1.11
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11243347--11243481
71
1.9
69
82
13
168
45
0
2
50
1.22
11243633--11244794
181
6.6
177
75
8
915
42
9
7
40
1.65
11243715--11244556
344
2.4
353
80
7
899
42
9
7
41
1.64
11244917--11244968
17
3.1
15
76
17
50
53
1
1
42
1.23
11245009--11245041
17
1.9
17
93
0
57
51
3
0
45
1.16
11245134--11245193
22
2.6
22
80
17
68
45
5
1
48
1.34
11245667--11245712
24
1.9
24
82
8
58
41
8
0
50
1.33
11246070--11246611
177
3.0
174
79
9
522
42
10
7
39
1.68
11247894--11247931
17
2.5
15
80
19
51
52
0
0
47
1.00
11247893--11247932
10
4.2
10
78
21
50
55
0
0
45
0.99

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130