Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite: G. Benson, "Tandem repeats finder: a program to analyze DNA sequences" Nucleic Acid Research(1999) Vol. 27, No. 2, pp. 573-580. Sequence: Gbar_D03 Parameters: 2 7 7 80 10 50 1000 Length: 50986338

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   

This is table  110  of  170  ( 20315 repeats found )
Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33992007--33992078
32
2.2
32
92
0
117
26
30
4
38
1.75
34012264--34012301
12
3.2
12
88
7
51
63
5
2
28
1.30
34013757--34013923
43
3.8
43
68
7
120
24
24
22
28
2.00
34013744--34013953
89
2.4
87
87
3
303
24
24
20
30
1.98
34013956--34015467
44
34.4
44
87
1
2033
23
26
19
31
1.98
34016734--34016768
16
2.2
17
90
10
56
11
2
2
82
0.88
34022188--34022225
12
3.2
12
88
7
51
63
5
2
28
1.30
34026909--34026972
29
2.2
30
86
8
87
57
0
7
34
1.27
34033429--34033659
45
5.1
45
93
1
383
28
22
25
23
1.99
34041335--34041386
24
2.2
24
89
0
77
50
9
3
36
1.54
34044815--34045235
138
3.1
137
85
4
562
46
5
8
39
1.56
34046386--34046422
17
2.2
17
90
9
58
75
2
5
16
1.10
34048041--34048077
3
12.3
3
94
0
65
2
0
32
64
1.07
34049539--34049655
38
3.1
38
85
7
157
12
19
29
37
1.89
34049563--34049634
22
3.5
22
65
27
68
11
22
30
36
1.89
34063123--34063152
15
2.0
15
93
0
51
50
6
3
40
1.45
34066295--34066357
19
3.4
18
86
4
65
39
7
17
34
1.79
34066297--34066350
19
2.8
19
94
0
90
38
9
14
37
1.79
34066558--34066597
20
2.0
21
85
5
55
22
7
5
65
1.38
34066840--34066891
25
2.1
25
82
7
61
17
3
3
75
1.11
34066824--34066894
35
2.0
35
84
13
92
19
4
4
71
1.19
34066965--34067018
22
2.5
21
84
6
72
27
1
3
66
1.19
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34067292--34067329
20
1.9
20
88
0
58
26
5
7
60
1.46
34074364--34074893
44
12.1
44
77
5
466
28
15
26
29
1.96
34074364--34074904
132
4.1
132
93
0
888
28
15
26
29
1.96
34075601--34075655
21
2.7
21
88
5
87
40
9
10
40
1.72
34076179--34076235
25
2.3
24
85
11
71
17
3
3
75
1.09
34076318--34076410
41
2.4
38
86
13
120
36
11
6
45
1.67
34092155--34092200
24
1.9
24
95
0
83
13
45
4
36
1.63
34092390--34092416
13
2.1
13
100
0
54
22
14
14
48
1.81
34094047--34094089
17
2.7
15
83
13
59
23
11
9
55
1.64
34095111--34095187
20
3.8
20
73
13
86
58
3
3
33
1.35
34095274--34095313
20
2.0
20
90
0
62
50
12
10
27
1.72
34095297--34095332
14
2.6
14
86
0
54
41
19
8
30
1.81
34096820--34096871
24
2.2
24
89
0
77
34
3
7
53
1.48
34097418--34097610
105
1.8
107
85
6
277
32
20
22
24
1.98
34101522--34101581
18
3.4
18
64
13
52
43
6
10
40
1.64
34101757--34102026
43
6.3
43
88
2
382
19
14
34
31
1.92
34105046--34105160
40
2.9
40
85
3
153
33
21
24
20
1.97
34105044--34105187
40
3.6
40
77
13
127
37
22
21
18
1.94
34105268--34105396
41
3.2
41
85
1
152
20
23
27
28
1.99
34105380--34105501
40
3.0
40
81
9
133
33
23
22
19
1.97
34105066--34105704
314
2.0
314
98
0
1224
26
23
25
24
2.00
34105582--34105712
41
3.2
40
81
2
145
17
21
29
32
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34106282--34106320
14
2.7
15
80
11
55
30
0
28
41
1.57
34106652--34106717
15
4.5
15
75
11
57
22
1
40
34
1.63
34107126--34107230
47
2.2
47
94
1
183
48
6
0
44
1.29
34107667--34107715
19
2.6
18
80
9
53
71
6
2
20
1.18
34107667--34107714
25
1.9
25
82
0
60
72
6
2
18
1.15
34107716--34107754
20
2.0
20
100
0
78
28
5
0
66
1.12
34107718--34107754
10
3.7
10
92
0
65
29
5
0
64
1.15
34110504--34110809
43
7.2
43
86
1
384
22
18
32
26
1.97
34112207--34112255
24
2.0
25
84
11
66
51
8
8
32
1.61
34112648--34112672
2
12.5
2
100
0
50
48
0
0
52
1.00
34113254--34113286
15
2.2
15
89
10
50
51
0
0
48
1.00
34114826--34114906
37
2.2
38
93
2
137
30
3
0
65
1.10
34119997--34120108
28
4.0
28
84
1
125
23
15
6
55
1.62
34120039--34120119
28
2.9
28
83
1
81
23
12
7
56
1.60
34120627--34120790
85
1.9
84
92
1
274
31
17
21
30
1.96
34122047--34122079
16
2.1
16
88
11
50
42
0
12
45
1.41
34122087--34122174
45
2.0
45
90
4
142
44
18
17
20
1.87
34122087--34122204
45
2.6
45
81
5
139
42
16
22
19
1.89
34122495--34122561
13
5.2
13
88
0
98
37
2
23
35
1.71
34126199--34126382
44
4.2
44
70
13
121
25
21
20
33
1.97
34126243--34126355
44
2.7
43
81
4
131
30
20
19
30
1.97
34126197--34126355
85
1.9
85
80
7
189
28
20
19
31
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34126301--34126513
44
4.9
44
72
11
170
25
21
20
32
1.97
34126301--34126529
87
2.6
88
84
5
315
26
21
20
31
1.98
34126481--34126794
44
7.1
44
66
15
157
31
24
16
26
1.97
34126860--34127057
44
4.5
44
66
14
104
30
23
17
28
1.97
34126452--34127106
132
5.0
132
92
0
1040
30
24
17
27
1.97
34127114--34127280
87
1.9
88
83
3
221
25
25
22
25
2.00
34129400--34129433
12
2.8
12
90
0
50
5
8
14
70
1.31
34133643--34133723
38
2.1
38
88
6
119
58
7
0
34
1.26
34142416--34142850
216
2.0
215
95
0
789
32
13
19
34
1.91
34145943--34146005
29
2.3
27
81
13
67
49
14
15
20
1.80
34152190--34152284
42
2.3
42
85
3
120
11
21
16
50
1.76
34152844--34152891
22
2.2
22
85
7
62
47
4
10
37
1.57
34157232--34157575
114
3.0
114
85
0
465
24
21
25
28
1.99
34158042--34158107
14
4.9
14
79
7
55
22
0
42
34
1.54
34158054--34158092
12
3.1
12
88
7
51
17
0
51
30
1.46
34158053--34158092
7
6.0
7
85
11
57
17
0
52
30
1.45
34158061--34158098
19
2.0
19
89
0
58
18
0
47
34
1.49
34158054--34158107
26
2.1
26
82
0
63
22
0
46
31
1.52
34158186--34158225
14
2.9
14
88
0
62
20
0
50
30
1.49
34158192--34158225
7
4.9
7
92
0
59
17
0
52
29
1.45
34158212--34158463
83
3.0
84
83
6
294
29
2
25
42
1.69
34158295--34158463
89
1.9
90
90
1
268
28
2
26
42
1.70
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34158512--34158565
21
2.6
21
72
21
51
50
1
5
42
1.36
34158560--34158600
9
4.4
9
90
6
64
63
0
7
29
1.21
34158560--34158602
19
2.3
19
95
0
77
62
0
6
30
1.21
34158588--34158627
20
2.0
20
90
5
62
77
0
0
22
0.77
34158596--34158637
20
2.2
19
83
8
50
80
0
2
16
0.81
34158789--34159540
199
3.8
199
91
1
1168
32
17
23
26
1.96
34159669--34159695
2
13.5
2
100
0
54
0
48
0
51
1.00
34162102--34162148
21
2.2
21
84
0
58
40
12
0
46
1.42
34162409--34162463
28
2.0
28
85
0
74
25
21
12
40
1.89
34162761--34162934
46
3.6
46
71
15
136
47
17
0
34
1.52
34162859--34162942
17
4.7
17
70
21
55
48
15
0
35
1.45
34162886--34162942
9
6.8
8
76
7
51
49
15
0
35
1.45
34162890--34162939
25
2.0
26
84
4
66
48
18
0
34
1.48
34162859--34162945
34
2.4
36
86
7
115
47
14
0
37
1.45
34162886--34162945
17
3.5
17
80
8
77
46
15
0
38
1.45
34163030--34163100
17
4.2
17
72
13
56
45
14
1
39
1.53
34163037--34163100
25
2.5
26
87
2
94
43
14
1
40
1.54
34163603--34163785
43
4.3
43
88
1
269
25
20
30
22
1.98
34166807--34166977
63
2.7
63
80
3
184
28
6
28
36
1.82
34171589--34171629
9
4.7
9
82
11
50
31
0
0
68
0.90
34173153--34173199
2
23.5
2
100
0
94
51
0
0
48
1.00
34177349--34177439
30
3.0
29
82
7
101
37
21
1
39
1.61
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34177925--34177960
15
2.4
15
100
0
72
16
44
25
13
1.85
34179210--34179244
18
1.9
18
88
0
52
25
28
8
37
1.85
34179501--34179540
21
1.9
21
89
0
62
30
35
17
17
1.93
34182786--34183294
126
4.1
127
89
3
714
27
16
17
38
1.92
34183369--34183467
34
2.9
33
88
4
135
44
18
0
37
1.50
34183518--34183584
21
3.2
21
65
0
62
46
28
0
25
1.53
34183509--34183599
42
2.1
42
88
6
139
47
28
1
23
1.59
34190507--34190582
37
2.1
37
100
0
152
36
5
15
42
1.70
34190515--34190575
20
3.2
20
65
21
58
36
6
18
39
1.76
34213450--34213489
21
2.0
21
90
5
64
37
30
5
27
1.78

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170