Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168470.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_7, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26282861

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   

This is table  107  of  133  ( 15876 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20829905--20829929
8
3.1
8
100
0
50
12
0
0
88
0.53
20831023--20831076
5
9.8
5
79
15
54
79
1
1
16
0.91
20831023--20831077
23
2.4
23
85
14
71
80
1
1
16
0.90
20831022--20831099
17
4.7
16
79
17
63
82
2
2
12
0.89
20831021--20831083
6
10.7
6
76
10
67
79
1
1
17
0.89
20831028--20831100
12
6.2
12
79
16
66
82
2
2
12
0.89
20831023--20831100
22
3.6
21
79
17
72
82
2
2
12
0.89
20835047--20835164
51
2.3
52
94
1
202
43
10
20
26
1.83
20840443--20840472
15
2.0
15
93
0
51
16
10
26
46
1.78
20840609--20840663
18
3.1
18
91
0
83
23
1
23
50
1.58
20841016--20841068
20
2.6
21
78
6
63
32
24
24
18
1.97
20844473--20844537
27
2.5
26
84
2
85
75
0
7
16
1.03
20844501--20844531
15
2.0
16
93
6
55
83
0
3
12
0.75
20847887--20847924
18
2.1
18
90
0
58
63
7
0
28
1.23
20848878--20849020
65
2.2
65
81
2
162
45
10
19
24
1.82
20848945--20849109
89
1.8
90
83
3
217
45
10
20
23
1.82
20860316--20860352
16
2.4
16
86
13
51
75
0
2
21
0.92
20871792--20871860
33
2.1
33
89
5
104
30
13
17
39
1.87
20872078--20872208
43
3.1
43
87
1
174
32
12
11
43
1.79
20872687--20872715
7
4.1
7
100
0
58
82
0
0
17
0.66
20873491--20873861
202
1.8
202
83
7
495
44
7
10
37
1.67
20873857--20873887
11
2.8
11
100
0
62
58
0
6
35
1.24
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20875536--20875616
41
2.0
41
92
0
135
33
16
20
29
1.94
20876553--20876602
19
2.6
18
75
12
55
72
2
16
10
1.21
20876559--20876600
13
3.5
12
82
17
52
69
2
16
11
1.29
20876571--20876600
13
2.4
13
94
5
53
66
3
16
13
1.37
20879670--20879707
15
2.4
16
91
4
60
76
0
15
7
1.01
20880696--20880733
18
2.1
18
95
0
67
60
7
0
31
1.25
20884404--20884498
47
2.0
47
85
0
127
30
10
15
43
1.81
20886486--20886518
16
2.1
16
88
11
50
18
12
21
48
1.80
20886728--20886782
21
2.6
21
79
0
65
36
9
14
40
1.78
20887193--20887290
22
4.5
22
76
10
83
36
16
6
40
1.73
20887281--20887388
44
2.5
44
79
0
117
35
7
10
47
1.66
20887461--20887801
44
7.8
44
73
14
199
34
8
6
50
1.59
20887588--20887644
21
2.6
22
80
5
62
42
12
1
43
1.52
20887369--20887836
22
21.2
22
70
6
133
35
8
6
48
1.60
20887639--20887892
22
11.7
21
71
11
156
35
9
8
46
1.67
20887637--20887805
64
2.6
65
80
8
191
34
9
7
48
1.64
20888270--20888381
22
5.1
21
72
4
80
34
6
12
46
1.67
20888272--20888389
44
2.7
43
74
12
114
36
5
11
45
1.65
20888446--20888488
22
2.0
22
95
0
77
30
9
9
51
1.65
20888496--20888554
22
2.7
22
81
2
66
45
13
5
35
1.66
20888578--20888660
22
3.9
21
73
9
60
38
8
8
44
1.65
20888572--20888690
44
2.7
43
81
11
127
36
9
7
46
1.64
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20888572--20888690
43
2.7
43
81
10
127
36
9
7
46
1.64
20888893--20889008
58
2.0
59
83
5
146
35
6
4
53
1.47
20888899--20889014
11
10.3
11
68
10
56
35
6
4
53
1.47
20888881--20888940
22
2.8
22
75
7
52
36
8
3
51
1.49
20888957--20889070
22
5.2
22
79
8
99
35
8
5
50
1.56
20888957--20889078
44
2.8
44
81
5
131
36
9
5
49
1.58
20888972--20889027
11
5.1
11
82
0
58
37
7
3
51
1.47
20889774--20889802
14
2.0
15
93
6
51
24
20
0
55
1.44
20892620--20892717
51
1.9
51
93
0
169
28
3
13
55
1.53
20898712--20898741
15
2.0
15
100
0
60
13
6
6
73
1.24
20910124--20910200
38
2.0
38
94
0
136
38
18
9
33
1.82
20912114--20912868
240
3.1
246
77
8
750
36
16
14
32
1.89
20912769--20912884
59
1.9
61
85
3
164
29
18
11
41
1.85
20912769--20912884
60
1.9
59
84
5
153
29
18
11
41
1.85
20925019--20925117
32
3.1
31
95
2
171
30
9
15
45
1.77
20925346--20925392
24
1.9
24
86
4
67
59
2
12
25
1.45
20933752--20933795
21
2.1
21
83
8
54
52
0
2
45
1.13
20933749--20933798
25
2.0
25
84
0
64
52
0
2
46
1.12
20935284--20935320
16
2.3
16
90
9
58
72
5
2
18
1.15
20936161--20936287
3
45.3
3
67
24
73
58
4
3
33
1.35
20936199--20936267
10
7.2
10
78
12
65
55
1
5
37
1.33
20936161--20936286
34
3.5
34
80
9
126
57
4
3
34
1.35
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20936200--20936286
39
2.2
40
86
8
117
56
3
4
35
1.37
20936203--20936264
5
11.6
5
80
13
70
56
1
4
37
1.30
20938420--20938460
1
41.0
1
85
0
55
0
4
2
92
0.44
20942343--20942436
5
18.8
5
70
19
54
75
5
2
17
1.08
20942369--20942426
19
3.1
19
80
14
59
72
3
1
22
1.09
20942393--20942432
19
2.0
20
90
4
64
75
2
2
20
1.04
20942373--20942427
14
3.9
14
77
13
58
70
3
1
23
1.12
20943306--20943417
3
39.0
3
73
21
98
58
3
1
35
1.26
20943307--20943453
34
4.6
32
75
14
119
55
4
3
36
1.38
20945960--20946053
24
3.9
24
79
5
109
54
13
4
27
1.58
20945957--20946091
24
6.4
19
71
18
67
51
14
5
28
1.65
20946161--20946244
20
4.3
20
72
14
68
53
9
4
32
1.54
20947211--20947243
17
1.9
17
93
0
57
69
9
9
12
1.36
20947211--20947252
8
5.1
8
80
13
50
66
9
11
11
1.44
20947628--20947685
30
1.9
30
85
0
80
20
18
13
46
1.83
20948735--20948767
17
1.9
17
88
11
50
69
21
0
9
1.15
20949225--20949266
12
3.7
12
81
12
52
61
2
4
30
1.29
20949475--20949723
37
6.7
38
80
2
245
38
23
11
25
1.89
20949472--20949723
112
2.2
112
94
0
441
39
23
11
25
1.88
20949472--20949724
75
3.4
75
78
3
276
39
23
11
25
1.88
20949694--20949749
26
2.2
26
83
3
69
35
26
16
21
1.94
20950633--20950738
52
2.1
51
87
3
151
52
8
12
26
1.67
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20961408--20961446
16
2.4
16
86
0
60
82
0
0
17
0.68
20961409--20961444
15
2.3
16
90
4
56
83
0
0
16
0.65
20961441--20961498
24
2.4
23
83
8
71
60
0
13
25
1.34
20961418--20961498
15
5.2
15
76
8
63
66
0
9
23
1.21
20961482--20961551
13
5.3
13
74
8
61
64
4
2
28
1.27
20962807--20963031
21
10.4
21
70
12
107
34
6
17
41
1.75
20962873--20962919
24
2.0
24
91
0
76
42
4
17
36
1.68
20962900--20962930
14
2.2
14
94
0
53
35
6
16
41
1.74
20962914--20962965
27
1.9
27
88
0
77
26
3
17
51
1.62
20963003--20963206
109
1.9
109
90
0
327
37
8
17
36
1.80
20963502--20963583
17
4.7
17
78
3
74
45
10
12
31
1.76
20963502--20963593
35
2.6
35
81
3
96
44
10
11
32
1.76
20963512--20963613
17
5.9
17
73
11
73
41
12
12
33
1.81
20963790--20963982
44
4.4
44
76
8
187
31
12
11
44
1.79
20963922--20964021
43
2.3
43
82
5
121
35
13
9
43
1.75
20964015--20964098
41
2.0
42
81
2
98
28
8
15
47
1.74
20965012--20965092
43
1.9
42
82
7
101
38
9
12
39
1.76
20965083--20965121
18
2.2
18
86
9
53
53
0
2
43
1.14
20966306--20966330
11
2.3
11
100
0
50
56
20
0
24
1.43
20966285--20966368
33
2.6
33
82
1
107
57
11
8
22
1.61
20966285--20966365
32
2.5
32
83
2
99
56
12
7
23
1.60
20966783--20966891
44
2.5
44
84
1
155
58
14
6
20
1.58
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20967506--20967586
20
4.2
20
82
7
105
50
9
3
35
1.53
20967512--20967590
38
2.1
37
92
2
131
53
10
3
32
1.53
20967500--20967609
38
2.6
42
77
15
129
53
9
3
33
1.50
20967503--20967627
62
2.1
58
83
8
153
52
11
4
32
1.55
20968992--20969019
13
2.2
13
100
0
56
35
7
7
50
1.57
20972253--20972378
62
2.0
62
92
3
209
44
15
5
34
1.69
20973545--20973834
155
1.8
154
81
8
352
50
6
13
30
1.66
20975052--20975103
18
2.7
19
80
13
63
15
11
0
73
1.11
20975363--20975417
16
3.4
17
73
19
55
58
0
0
41
0.98
20975511--20975549
19
2.0
20
85
5
53
58
5
0
35
1.20

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133