Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168470.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_7, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26282861

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   

This is table  27  of  133  ( 15876 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6492891--6493042
65
2.3
65
79
2
162
23
17
12
46
1.82
6492991--6493157
65
2.6
65
74
1
156
23
16
12
47
1.80
6493437--6493511
3
25.0
3
100
0
150
33
0
0
66
0.92
6493836--6493914
33
2.4
32
81
10
97
8
0
21
69
1.15
6493926--6493979
27
2.0
28
85
10
76
42
1
18
37
1.61
6494290--6494381
24
3.7
26
76
15
86
21
6
1
70
1.16
6494339--6494381
12
3.4
12
81
18
52
18
9
0
72
1.11
6499627--6499661
15
2.4
14
86
9
52
2
0
8
88
0.61
6500116--6500182
33
2.1
32
86
8
93
56
1
8
32
1.39
6500295--6500347
27
1.9
28
84
3
72
33
1
0
64
1.05
6500310--6500343
16
2.2
16
89
5
52
35
0
0
64
0.94
6500695--6500733
17
2.2
18
95
4
71
46
0
7
46
1.31
6501390--6501420
2
15.5
2
100
0
62
48
0
0
51
1.00
6504480--6504510
11
2.8
11
95
0
53
41
12
9
35
1.76
6511090--6511127
18
2.1
19
85
5
51
21
7
18
52
1.70
6516739--6517034
156
1.9
156
97
0
565
38
18
14
28
1.90
6517042--6517072
16
1.9
16
93
0
53
80
6
0
12
0.89
6517048--6517082
18
1.9
18
88
0
52
88
5
0
5
0.63
6517090--6517139
15
3.2
16
83
11
59
2
34
44
20
1.63
6517102--6517139
5
7.6
5
82
11
51
0
34
44
21
1.52
6517359--6517403
19
2.4
19
84
0
63
22
22
31
24
1.99
6517465--6517537
31
2.4
31
90
4
112
27
24
26
21
2.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6517863--6517973
43
2.5
45
78
5
120
62
6
7
24
1.45
6517956--6518136
3
59.3
3
68
22
62
64
6
1
28
1.24
6518300--6518358
7
7.5
8
85
11
70
0
0
10
89
0.47
6518308--6518359
1
52.0
1
84
0
68
0
0
7
92
0.39
6518292--6518359
17
3.9
17
87
12
79
0
0
11
88
0.52
6518300--6518359
10
6.4
10
88
9
83
0
0
10
90
0.47
6518292--6518359
9
7.6
9
87
8
86
0
0
11
88
0.52
6518366--6518919
42
13.4
42
90
4
790
37
22
17
23
1.94
6518366--6518942
83
7.0
83
90
4
814
37
22
17
23
1.94
6520128--6520184
8
7.1
8
78
7
62
10
12
0
77
1.00
6520160--6520203
16
2.8
15
79
6
52
6
13
0
79
0.92
6520160--6520196
16
2.3
16
90
0
56
5
10
0
83
0.79
6523837--6524132
156
1.9
156
98
0
574
38
18
14
28
1.90
6524148--6524174
10
2.7
10
100
0
54
77
7
0
14
0.97
6524189--6524238
15
3.2
16
83
11
59
2
34
44
20
1.63
6524201--6524238
5
7.6
5
82
11
51
0
34
44
21
1.52
6524949--6525057
42
2.5
44
77
7
116
61
6
7
24
1.46
6525040--6525221
3
58.3
3
69
21
76
63
6
1
29
1.25
6525587--6525634
24
2.0
24
95
0
87
27
16
10
45
1.80
6527643--6527671
14
2.1
14
100
0
58
34
10
6
48
1.64
6530865--6530906
2
21.0
2
90
0
66
0
50
2
47
1.14
6535064--6535104
2
20.5
2
100
0
82
51
0
0
48
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6535497--6535623
62
2.0
65
87
4
188
38
12
22
26
1.90
6535913--6535999
44
2.0
44
84
2
113
36
9
16
37
1.80
6538812--6538846
2
17.5
2
100
0
70
51
0
0
48
1.00
6544786--6544826
21
1.9
21
85
5
55
82
4
7
4
0.93
6547145--6547273
61
2.1
62
85
5
181
51
13
5
29
1.62
6555623--6555675
26
2.0
26
88
0
79
56
0
0
43
0.99
6555675--6555726
14
3.6
14
74
5
59
55
0
1
42
1.10
6555661--6555701
21
1.9
21
85
14
57
58
0
0
41
0.98
6555642--6555736
29
3.2
30
85
5
122
54
0
1
44
1.07
6555987--6556017
7
4.4
7
100
0
62
61
0
25
12
1.32
6557237--6557263
13
2.1
13
100
0
54
37
14
14
33
1.88
6564998--6565163
83
2.0
85
81
7
196
54
4
1
39
1.27
6565099--6565192
9
9.7
9
74
14
71
51
4
3
41
1.37
6565252--6565313
18
3.4
18
75
20
58
59
6
1
32
1.32
6565263--6565315
18
3.0
17
83
5
61
58
7
1
32
1.37
6565272--6565315
18
2.5
18
85
3
63
56
4
2
36
1.32
6565357--6565396
20
2.0
21
90
5
64
50
2
7
40
1.44
6565467--6565543
29
2.6
29
82
8
93
66
2
2
28
1.18
6565666--6565720
22
2.5
22
80
8
67
40
0
5
54
1.23
6565692--6565717
13
2.0
13
100
0
52
30
0
7
61
1.24
6566776--6566812
18
2.1
18
95
5
67
62
2
0
35
1.10
6566836--6566919
11
8.3
10
71
16
57
55
3
2
38
1.30
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6566839--6566923
21
4.1
21
65
17
54
52
3
2
41
1.31
6566894--6566954
27
2.3
27
83
8
88
52
1
0
45
1.10
6567026--6567101
9
8.6
9
70
13
59
53
0
5
40
1.23
6567276--6567342
26
2.5
27
73
11
66
32
1
2
62
1.19
6567398--6567423
9
2.9
9
100
0
52
11
0
7
80
0.89
6567421--6567473
20
2.6
21
85
5
65
28
3
9
58
1.47
6568526--6568550
12
2.1
12
100
0
50
40
8
0
52
1.31
6570396--6570485
40
2.2
40
84
9
121
37
21
6
34
1.79
6570411--6570491
40
2.0
40
92
0
135
39
19
8
32
1.82
6573450--6573572
65
1.9
65
94
1
221
24
16
7
52
1.69
6574274--6574337
19
3.0
23
61
25
59
17
7
10
64
1.48
6574982--6575063
39
2.1
39
95
0
146
18
13
23
45
1.84
6594258--6594307
2
26.0
2
84
8
68
48
2
2
48
1.24
6594479--6594504
2
13.0
2
100
0
52
50
0
0
50
1.00
6594773--6594802
15
2.0
15
93
0
51
43
20
0
36
1.52
6600406--6600432
2
13.5
2
100
0
54
51
0
0
48
1.00
6601015--6601053
17
2.4
16
83
8
51
43
0
0
56
0.99
6601710--6601755
22
2.1
23
88
8
69
36
6
4
52
1.47
6601713--6601766
22
2.4
23
82
11
67
38
5
1
53
1.35
6622600--6622636
12
3.2
12
88
3
58
32
0
0
67
0.91
6622599--6622646
22
2.2
22
85
7
62
39
0
0
60
0.97
6622613--6622653
20
2.0
21
85
4
57
48
0
0
51
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6622619--6622696
37
2.1
38
81
15
92
51
1
1
46
1.17
6622722--6622763
14
2.6
17
78
21
54
35
4
0
59
1.19
6622745--6622792
11
4.2
11
79
10
51
39
2
2
56
1.23
6622752--6622797
24
1.9
24
86
8
67
45
0
2
52
1.13
6622974--6623007
13
2.6
13
86
13
52
52
0
0
47
1.00
6627890--6627925
16
2.2
16
90
0
54
83
11
5
0
0.80
6628054--6628096
22
1.9
22
85
4
59
34
46
6
11
1.67
6628308--6628344
12
3.2
12
85
11
51
75
8
0
16
1.02
6630883--6630927
19
2.3
20
96
3
83
40
11
0
48
1.39
6639911--6639949
20
2.0
20
89
0
60
43
5
0
51
1.24
6642155--6642197
22
1.9
22
85
4
59
48
4
27
18
1.68
6646808--6646837
2
15.0
2
100
0
60
50
0
0
50
1.00
6657003--6657029
1
27.0
1
100
0
54
0
0
0
100
0.00
6657297--6657364
31
2.2
31
81
7
75
51
8
0
39
1.33
6658423--6658982
71
7.9
71
71
13
327
39
11
5
43
1.63
6658425--6658774
143
2.4
144
80
9
367
40
11
4
43
1.61
6659439--6659471
17
1.9
17
93
0
57
21
9
0
69
1.15
6661343--6661506
80
2.0
80
87
2
231
29
9
26
35
1.87
6665799--6665920
3
40.7
3
76
16
103
68
2
1
27
1.11
6665790--6665920
50
2.7
49
83
11
157
69
2
1
26
1.09
6665787--6665921
59
2.2
60
85
10
186
69
2
1
26
1.08
6667008--6667047
12
3.4
12
86
3
55
60
0
0
40
0.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6677701--6677731
15
2.1
15
100
0
62
54
19
0
25
1.44
6678276--6678300
12
2.1
12
100
0
50
44
0
8
48
1.32
6678317--6678389
37
2.0
37
94
0
128
42
13
2
41
1.59
6678586--6678748
77
2.2
77
80
3
188
36
7
6
49
1.57
6686475--6686500
3
8.7
3
100
0
52
0
30
0
69
0.89
6688212--6688240
2
14.5
2
100
0
58
48
0
0
51
1.00
6688532--6688597
30
2.4
27
76
16
71
43
0
0
56
0.99
6688588--6688634
22
2.2
22
96
3
87
48
0
0
51
1.00
6691411--6691467
20
2.8
21
82
12
75
57
0
0
42
0.98
6691861--6691914
22
2.4
22
93
3
90
51
0
1
46
1.11

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133