Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168470.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_7, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26282861

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   

This is table  122  of  133  ( 15876 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23502949--23502992
17
2.8
16
86
6
54
56
0
0
43
0.99
23502951--23502992
8
5.2
8
80
8
50
59
0
0
40
0.97
23502929--23503016
31
2.9
30
73
8
72
57
0
0
42
0.98
23508391--23508439
19
2.5
20
80
6
55
59
2
0
38
1.09
23524218--23524243
3
8.7
3
100
0
52
30
0
0
69
0.89
23526271--23526301
15
2.1
15
100
0
62
35
0
19
45
1.51
23528891--23528936
12
3.8
12
83
13
58
60
0
2
36
1.09
23529152--23529177
13
2.0
13
100
0
52
30
0
0
69
0.89
23529562--23529650
30
3.0
30
83
6
101
51
4
7
35
1.51
23529600--23529659
30
2.0
30
86
0
84
55
5
8
31
1.51
23532685--23532767
34
2.4
34
77
0
94
36
15
14
33
1.88
23532802--23532907
34
3.1
34
82
5
133
36
12
10
40
1.77
23535916--23535998
12
6.6
12
74
10
58
46
13
4
34
1.64
23535960--23535992
4
8.2
4
100
0
66
51
24
0
24
1.48
23542714--23542738
9
2.8
9
100
0
50
92
0
8
0
0.40
23543108--23543269
56
2.9
54
83
3
180
53
9
10
27
1.65
23547134--23547230
16
6.9
14
66
21
51
78
0
12
9
0.97
23547134--23547230
7
13.7
7
69
21
51
78
0
12
9
0.97
23547135--23547193
16
3.9
16
76
14
54
77
0
11
10
0.98
23547171--23547246
17
4.1
18
71
13
57
76
0
15
7
1.01
23547171--23547211
18
2.2
18
87
12
57
78
0
12
9
0.98
23548123--23548337
6
34.5
6
75
14
87
23
1
3
71
1.11
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23548111--23548227
31
3.8
29
74
16
103
15
3
2
78
0.99
23548123--23548227
13
8.5
12
74
17
58
16
1
2
79
0.95
23548123--23548293
49
3.4
49
73
14
134
21
2
4
71
1.14
23548265--23548335
3
23.7
3
100
0
142
32
0
0
67
0.91
23548401--23548449
21
2.2
23
85
10
66
20
8
8
63
1.48
23549272--23549319
24
2.1
22
88
7
69
14
0
6
79
0.92
23549344--23549422
5
15.6
5
76
18
67
16
1
2
79
0.90
23549344--23549418
6
12.3
6
75
18
57
16
1
2
80
0.90
23549339--23549418
26
3.2
25
78
7
81
16
1
2
80
0.90
23549337--23549421
31
2.8
29
81
11
109
15
1
3
80
0.92
23549339--23549417
13
6.3
13
71
22
53
16
1
2
79
0.90
23549434--23550182
58
12.7
58
80
7
778
46
6
11
35
1.65
23549434--23550182
118
6.3
115
82
6
840
46
6
11
35
1.65
23549825--23549872
16
2.9
17
78
6
53
54
2
2
41
1.24
23551045--23551203
46
3.5
46
90
0
246
41
11
10
35
1.77
23551103--23551170
21
3.0
21
72
15
73
41
11
11
35
1.78
23551073--23551228
25
6.6
24
72
12
117
42
11
10
34
1.76
23551119--23551271
71
2.1
72
88
5
222
44
12
10
32
1.76
23551190--23551280
47
1.9
47
86
0
128
41
10
13
34
1.79
23551273--23551335
22
2.9
22
84
11
85
41
7
14
36
1.75
23551372--23551412
21
2.0
21
90
0
64
36
7
17
39
1.77
23551433--23551478
16
2.8
16
83
3
56
34
10
15
39
1.82
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23551439--23551484
24
1.9
24
82
8
58
32
8
15
43
1.77
23551620--23551664
22
2.0
22
95
0
81
17
6
15
60
1.56
23551642--23552059
40
10.3
39
80
8
290
22
10
17
49
1.77
23551643--23552059
81
5.1
81
77
11
354
23
10
17
49
1.77
23551642--23551973
121
2.7
119
83
7
368
22
10
18
49
1.77
23553251--23553469
56
4.0
55
78
8
223
54
8
11
24
1.64
23553269--23553470
107
1.9
107
87
2
298
53
9
11
25
1.66
23560447--23560472
3
8.7
3
100
0
52
69
0
0
30
0.89
23562586--23562625
2
20.0
2
100
0
80
50
0
0
50
1.00
23569987--23570028
21
2.0
21
100
0
84
28
19
14
38
1.90
23575944--23575991
21
2.2
22
78
14
55
31
27
2
39
1.68
23577099--23577130
16
2.1
16
88
11
50
25
0
9
65
1.22
23580528--23580576
25
2.0
25
84
8
64
16
12
6
65
1.45
23581492--23581516
2
12.5
2
100
0
50
48
0
0
52
1.00
23581782--23581842
3
20.3
3
100
0
122
67
0
0
32
0.91
23581967--23582031
33
2.0
33
84
6
87
41
4
3
50
1.38
23588518--23588576
29
2.1
28
81
9
66
32
0
5
62
1.17
23592781--23592936
3
53.3
3
80
15
150
32
1
5
61
1.26
23593932--23594007
40
1.9
40
82
12
95
67
6
2
23
1.27
23598673--23598719
8
5.6
8
85
9
67
85
4
0
10
0.74
23598673--23598719
9
5.4
9
87
2
62
85
4
0
10
0.74
23598672--23598751
18
4.6
18
78
17
64
81
3
8
6
0.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23598704--23598756
21
2.7
20
85
5
63
83
1
13
1
0.82
23599529--23599847
120
2.6
122
79
4
342
21
19
11
47
1.80
23599529--23600053
121
4.3
121
75
6
384
20
20
11
46
1.82
23600932--23600980
20
2.5
20
80
6
64
16
2
30
51
1.56
23601344--23601388
19
2.5
17
82
10
54
11
4
4
80
1.01
23602334--23602386
18
2.9
18
85
0
70
35
33
1
28
1.68
23603555--23603609
5
11.0
5
77
14
60
78
1
3
16
0.98
23603555--23603607
20
2.7
20
85
11
74
79
1
3
15
0.96
23603630--23603668
20
2.0
20
89
0
60
23
17
28
30
1.97
23603996--23604038
22
2.0
22
90
0
68
65
11
0
23
1.25
23604752--23605206
118
3.9
117
78
6
409
45
15
20
18
1.85
23606045--23606075
16
1.9
16
93
0
53
16
3
0
80
0.83
23614032--23614084
5
10.8
5
80
15
58
77
3
0
18
0.92
23623809--23624745
235
4.0
234
83
3
1064
33
7
12
46
1.70
23623809--23624745
474
2.0
467
85
3
1256
33
7
12
46
1.70
23624736--23624971
121
2.0
121
96
0
436
41
10
8
38
1.70
23626282--23626562
139
2.0
139
90
0
445
32
7
18
41
1.79
23629831--23629864
17
2.0
17
100
0
68
41
11
0
47
1.40
23630811--23631336
206
2.6
205
82
2
626
34
10
10
44
1.73
23630835--23631531
206
3.4
203
78
5
578
33
11
10
43
1.75
23635348--23635379
11
2.9
11
95
0
55
25
0
28
46
1.53
23635405--23635558
51
3.0
51
84
3
166
42
9
22
25
1.83
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23636044--23636128
31
2.7
31
90
0
134
28
21
24
25
1.99
23636162--23636247
25
3.5
24
76
3
84
36
5
33
24
1.79
23636142--23636247
50
2.2
48
83
6
124
36
5
33
24
1.79
23636180--23636247
23
2.9
22
79
14
82
35
4
32
27
1.77
23636457--23636488
11
2.9
11
95
0
55
25
0
28
46
1.53
23636514--23636667
51
3.0
52
81
5
170
43
8
22
25
1.81
23639102--23639247
73
2.0
73
100
0
292
47
9
9
32
1.68
23639228--23639267
2
20.0
2
100
0
80
50
0
0
50
1.00
23642420--23642467
18
2.6
18
83
3
60
47
0
2
50
1.12
23642460--23642521
25
2.6
24
80
9
65
62
0
0
37
0.95
23643283--23643322
16
2.5
17
84
8
57
32
0
5
62
1.17
23644783--23644825
22
2.0
22
81
9
52
46
4
11
37
1.61
23644856--23644912
22
2.7
21
80
2
69
47
7
10
35
1.65
23644885--23645223
22
15.9
21
70
12
138
52
5
7
34
1.54
23644899--23644978
11
7.3
11
75
8
65
57
2
6
33
1.37
23644927--23645225
44
7.0
44
67
14
153
53
5
7
33
1.53
23644926--23645166
81
2.9
83
75
9
222
53
4
7
33
1.50
23645137--23645216
11
7.3
11
68
10
56
47
7
8
36
1.63
23645504--23645545
22
2.0
20
86
13
59
52
7
7
33
1.56
23645587--23645647
21
2.9
22
72
15
58
55
4
4
34
1.43
23645685--23645774
22
4.1
22
75
5
74
53
6
5
34
1.51
23645947--23645983
17
2.2
17
90
0
56
54
5
8
32
1.53
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23645964--23646038
22
3.4
22
74
5
71
46
8
9
36
1.65
23660543--23660668
60
2.1
60
82
12
152
35
7
7
49
1.60
23660709--23660923
63
3.4
62
79
7
218
38
7
7
46
1.61
23661572--23661625
28
1.9
28
85
7
74
35
9
3
51
1.52
23661943--23661983
11
3.6
12
83
6
50
63
0
0
36
0.95
23661979--23662019
13
3.2
13
83
13
50
43
0
0
56
0.99
23671647--23671744
22
4.4
22
75
5
90
28
14
23
33
1.94
23671657--23671794
22
6.2
23
73
8
88
31
15
21
31
1.94
23671652--23671782
67
2.0
67
81
3
156
32
13
22
32
1.93
23676390--23676419
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133