Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168470.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_7, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26282861

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   

This is table  26  of  133  ( 15876 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6331124--6331158
16
2.2
16
94
0
61
40
11
5
42
1.65
6333202--6333242
11
3.9
11
78
12
50
68
2
0
29
1.03
6334099--6334190
30
3.1
29
74
11
96
51
1
8
39
1.40
6339941--6339974
13
2.7
12
86
13
50
35
0
14
50
1.44
6344120--6344181
13
4.7
13
77
2
52
4
6
4
83
0.89
6344391--6344595
83
2.5
85
78
8
215
36
16
15
31
1.90
6344348--6344656
84
3.7
84
71
5
248
37
14
15
32
1.88
6352136--6352185
22
2.2
22
79
10
57
66
4
6
24
1.32
6353419--6353445
10
2.7
10
100
0
54
92
0
7
0
0.38
6353413--6353458
8
6.0
8
84
5
51
84
2
10
2
0.79
6353413--6353445
10
3.0
11
86
13
50
87
0
9
3
0.63
6354926--6354995
34
2.1
34
97
0
131
44
11
10
34
1.74
6356943--6356984
19
2.2
20
91
4
68
19
0
0
80
0.70
6356938--6356998
19
3.3
19
81
4
63
18
3
1
77
0.99
6356994--6357161
4
42.2
4
73
12
107
28
1
3
66
1.19
6357002--6357161
48
3.4
47
73
13
134
28
1
3
66
1.17
6357132--6357222
21
4.3
22
76
9
91
23
3
3
70
1.17
6358140--6358235
5
18.6
5
74
16
72
15
5
3
76
1.10
6358154--6358235
17
4.9
17
70
15
55
13
6
2
78
1.04
6358159--6358236
32
2.5
31
81
4
86
12
7
2
76
1.09
6358254--6358821
58
9.7
56
78
10
541
43
6
12
36
1.69
6358254--6358821
115
4.8
115
85
7
696
43
6
12
36
1.69
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6358732--6358822
27
3.2
27
65
22
69
38
5
17
38
1.73
6365644--6365689
20
2.2
22
88
7
69
76
0
13
10
1.03
6366691--6366988
41
7.1
41
83
4
310
24
16
22
36
1.94
6366723--6366988
85
3.2
84
86
3
324
24
16
22
37
1.93
6366995--6367044
6
9.0
6
79
20
56
84
16
0
0
0.63
6367004--6367047
5
8.8
5
87
7
63
86
13
0
0
0.57
6366997--6367044
16
2.9
16
90
3
69
85
14
0
0
0.60
6366997--6367057
21
2.9
21
87
4
79
85
11
1
1
0.75
6367002--6367057
10
5.5
10
87
4
76
85
10
1
1
0.74
6367218--6367302
15
5.3
16
74
22
63
22
1
3
72
1.06
6367228--6367262
10
3.4
10
88
7
52
22
0
0
77
0.78
6367218--6367254
17
2.2
17
90
4
58
24
0
2
72
0.97
6367271--6367452
4
44.5
4
68
14
79
28
2
4
64
1.27
6367224--6367345
45
2.9
39
80
16
104
25
2
4
68
1.20
6367277--6367401
49
2.6
49
78
3
128
29
2
4
63
1.28
6367371--6367469
21
4.5
22
74
12
80
28
4
2
65
1.21
6368423--6368500
17
4.6
16
75
16
68
14
5
2
78
1.03
6368423--6368490
22
3.1
21
74
19
59
13
5
2
77
1.06
6368517--6369029
59
8.7
57
81
9
541
45
6
11
35
1.67
6368517--6369029
179
2.9
177
85
6
691
45
6
11
35
1.67
6368516--6369029
238
2.2
236
88
5
754
45
6
11
35
1.67
6372167--6372328
65
2.5
65
81
4
200
37
12
8
42
1.72
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6373939--6373967
3
9.7
3
100
0
58
0
34
0
65
0.93
6377107--6377163
30
1.9
30
85
0
78
45
0
1
52
1.11
6377136--6377187
22
2.5
22
93
6
90
50
0
0
50
1.00
6377198--6377275
31
2.4
32
81
8
88
21
14
34
29
1.93
6377192--6377283
33
2.7
34
75
9
89
18
14
38
29
1.90
6377913--6377961
2
24.5
2
100
0
98
0
48
0
51
1.00
6386582--6386610
2
14.5
2
100
0
58
0
51
0
48
1.00
6387874--6387953
40
2.0
40
95
0
142
36
5
17
41
1.71
6389760--6389791
2
16.0
2
100
0
64
50
0
0
50
1.00
6391714--6391766
23
2.3
23
87
6
72
39
18
7
33
1.79
6403516--6403674
78
2.0
78
92
2
266
45
10
22
22
1.82
6407636--6407676
6
7.2
6
88
5
59
85
12
0
2
0.70
6408274--6408447
87
2.0
86
96
1
321
28
13
13
43
1.83
6408609--6408662
22
2.5
22
87
3
74
42
0
0
57
0.98
6423159--6423188
3
9.7
3
92
7
51
63
0
0
36
0.95
6427043--6427101
29
2.0
29
86
0
82
44
15
3
37
1.63
6430168--6430210
9
4.8
9
79
0
50
37
2
2
58
1.24
6430166--6430200
18
1.9
18
94
0
61
40
5
2
51
1.40
6436514--6436546
6
5.5
6
100
0
66
15
30
0
54
1.41
6436771--6436797
13
2.1
13
100
0
54
0
29
33
37
1.58
6437562--6437591
12
2.5
12
88
0
51
60
0
0
40
0.97
6441087--6441186
44
2.3
43
82
12
125
47
13
8
32
1.71
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6441286--6441508
18
12.3
18
68
17
54
45
8
13
32
1.73
6441305--6441347
19
2.4
17
82
14
59
46
6
9
37
1.63
6441263--6441367
55
1.9
54
88
9
160
45
8
11
34
1.71
6441377--6441449
17
4.1
17
77
12
67
49
9
12
28
1.72
6441264--6441527
36
7.3
36
69
16
120
45
8
13
32
1.74
6441412--6441678
19
14.4
19
72
11
124
43
10
14
31
1.78
6441689--6441731
18
2.5
17
85
7
59
41
11
16
30
1.83
6441725--6441792
19
3.6
19
87
0
73
50
14
10
25
1.74
6441724--6441815
8
10.2
8
68
25
51
46
15
10
27
1.78
6441747--6441817
19
3.8
19
83
7
92
45
15
11
28
1.80
6441809--6441884
22
3.3
23
72
5
73
42
13
7
36
1.73
6443685--6443763
27
2.8
28
81
11
74
12
16
0
70
1.16
6443705--6443781
38
2.0
38
85
5
102
14
16
0
68
1.21
6443721--6443763
13
3.3
13
79
20
54
11
9
0
79
0.95
6444030--6444078
18
2.8
18
87
6
66
12
16
0
71
1.14
6447876--6448171
98
3.0
94
78
12
287
40
9
6
43
1.64
6450557--6450597
17
2.6
16
88
7
57
58
12
2
26
1.46
6451684--6451758
30
2.6
28
85
8
105
50
6
1
41
1.37
6451693--6451769
30
2.6
30
85
8
86
45
9
1
44
1.43
6451684--6451781
30
3.7
26
77
18
71
48
7
1
42
1.37
6451824--6451866
22
2.0
22
85
0
59
72
2
9
16
1.21
6452512--6452559
6
7.7
6
78
17
53
62
4
0
33
1.14
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6454417--6454455
17
2.3
17
86
0
51
41
0
5
53
1.23
6454651--6454684
14
2.4
14
90
0
59
58
14
2
23
1.50
6454689--6454729
17
2.3
18
83
8
57
63
12
2
21
1.40
6454702--6454733
17
1.9
17
93
6
57
59
12
3
25
1.48
6454707--6454769
20
3.2
20
80
10
78
52
7
4
34
1.52
6454902--6454967
19
3.5
19
70
10
55
74
1
7
16
1.12
6456077--6456117
18
2.2
18
86
4
55
19
0
2
78
0.87
6458420--6458454
14
2.5
14
85
0
52
57
11
0
31
1.34
6458476--6458538
19
3.3
19
78
10
65
50
11
7
30
1.66
6458692--6458735
18
2.4
18
85
10
63
81
4
0
13
0.83
6458692--6458746
20
2.8
19
76
10
58
80
5
1
12
0.97
6458702--6458733
15
2.3
15
89
10
50
78
6
0
15
0.95
6458662--6458743
25
3.2
24
75
16
67
79
6
2
12
1.01
6459112--6459159
20
2.4
20
79
6
53
75
8
4
12
1.18
6459713--6459761
22
2.3
20
80
10
53
12
8
6
73
1.24
6460233--6460279
21
2.2
21
85
7
60
44
2
2
51
1.25
6460297--6460349
11
4.5
11
77
11
52
49
0
0
50
1.00
6460300--6460346
20
2.2
22
81
7
62
48
0
0
51
1.00
6460436--6460472
19
2.0
19
94
5
67
45
5
5
43
1.49
6463826--6463869
2
22.0
2
100
0
88
50
0
50
0
1.00
6471503--6471563
25
2.5
24
86
5
86
80
1
11
6
0.97
6471503--6471563
12
4.9
12
80
11
70
80
1
11
6
0.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6472987--6473042
22
2.5
22
85
5
69
32
12
19
35
1.89
6473769--6473912
44
3.3
44
90
0
216
24
7
16
51
1.70
6473768--6474006
44
5.5
44
83
3
196
28
5
15
49
1.67
6476316--6476348
3
11.3
3
93
6
59
33
0
0
66
0.92
6476313--6476345
14
2.4
14
95
5
59
33
0
0
66
0.92
6476316--6476348
17
1.9
17
100
0
66
33
0
0
66
0.92
6477341--6477378
16
2.2
19
86
13
55
36
5
5
52
1.47
6492594--6492872
65
4.3
65
76
6
192
25
22
11
40
1.87
6492716--6492912
65
3.0
65
78
5
168
24
21
12
41
1.88
6492863--6493016
65
2.4
65
80
4
159
24
16
11
48
1.78

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133