Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168470.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_7, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26282861

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   

This is table  8  of  133  ( 15876 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1965282--1965317
9
3.9
9
88
3
54
61
0
0
38
0.96
1965693--1965727
17
2.1
17
94
0
61
68
0
0
31
0.90
1971334--1971375
12
3.5
12
78
12
50
35
0
0
64
0.94
1971317--1971375
8
7.2
8
73
16
50
33
0
0
66
0.92
1971319--1971375
24
2.3
25
90
3
89
33
0
0
66
0.92
1971378--1971437
29
2.0
31
90
6
97
51
0
1
46
1.10
1975035--1975076
12
3.5
12
83
6
50
54
2
0
42
1.13
1979250--1979275
13
2.0
13
100
0
52
23
7
7
61
1.49
1984981--1985010
15
2.0
15
93
0
51
33
23
0
43
1.54
1985273--1985310
17
2.2
18
85
4
51
39
0
0
60
0.97
1986490--1986607
60
1.9
60
88
6
175
39
10
8
41
1.69
1990287--1990724
221
2.0
222
91
1
718
45
8
9
36
1.68
1996410--1996464
26
2.1
26
89
0
83
61
7
1
29
1.33
2000740--2000828
29
3.1
29
84
7
94
39
3
2
55
1.29
2001904--2002002
33
2.8
33
74
9
81
47
0
2
50
1.12
2002061--2002092
15
2.1
15
94
0
55
21
0
0
78
0.76
2014613--2014645
16
2.1
16
94
0
57
30
15
6
48
1.69
2015183--2015214
16
2.0
16
93
0
55
62
3
6
28
1.34
2015327--2015369
21
2.0
21
100
0
86
41
4
9
44
1.57
2017479--2017537
12
4.8
12
78
12
57
42
3
3
50
1.35
2017704--2017747
20
2.1
20
87
8
61
68
0
0
31
0.90
2017742--2017793
21
2.5
20
76
14
52
50
7
7
34
1.60
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2018555--2018621
31
2.1
32
88
2
100
22
25
5
46
1.74
2019687--2019716
3
9.7
3
92
7
51
70
0
30
0
0.88
2019687--2019713
13
2.1
13
100
0
54
70
0
29
0
0.88
2028261--2028296
2
18.0
2
100
0
72
50
0
0
50
1.00
2035166--2035232
20
3.2
20
76
13
64
61
0
2
35
1.12
2037284--2037366
32
2.5
32
79
14
89
53
2
0
44
1.13
2043527--2043552
2
13.0
2
100
0
52
50
0
0
50
1.00
2048551--2048632
30
2.8
30
83
9
96
50
2
9
37
1.49
2057638--2057670
2
16.5
2
100
0
66
51
0
0
48
1.00
2058988--2059067
42
1.9
42
97
0
151
41
12
21
25
1.88
2061563--2061592
2
15.0
2
100
0
60
50
0
0
50
1.00
2067801--2067830
15
2.1
14
93
6
51
90
0
0
10
0.47
2072633--2072678
2
23.0
2
86
0
65
45
2
4
47
1.34
2075671--2075715
22
2.0
22
100
0
90
35
28
4
31
1.77
2077510--2077560
12
4.2
12
79
2
57
41
0
0
58
0.98
2078271--2078297
7
3.9
7
100
0
54
59
0
0
40
0.98
2079922--2079951
13
2.3
13
94
0
51
76
0
0
23
0.78
2082627--2082664
2
19.5
2
94
5
69
50
0
0
50
1.00
2092545--2092587
18
2.3
18
88
4
59
18
16
11
53
1.72
2102147--2102186
17
2.4
17
100
0
80
42
22
10
25
1.84
2103271--2103303
2
16.5
2
100
0
66
51
0
48
0
1.00
2106773--2107193
231
1.8
231
83
1
565
22
27
11
38
1.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2112688--2112729
19
2.3
19
87
4
59
30
0
0
69
0.89
2112748--2112803
21
2.4
25
82
14
75
51
1
0
46
1.11
2112766--2112803
13
3.0
13
80
3
51
57
0
0
42
0.98
2113950--2113974
11
2.3
11
100
0
50
40
36
16
8
1.77
2115354--2115420
25
2.8
23
78
14
73
50
0
1
47
1.10
2115353--2115439
25
3.5
25
68
22
67
50
0
1
48
1.08
2116040--2116125
11
7.2
12
73
13
63
68
1
1
29
1.04
2116038--2116116
12
6.5
12
72
13
56
68
1
1
29
1.05
2134831--2134915
6
14.2
6
71
14
68
35
1
44
18
1.58
2134831--2134915
42
2.0
42
88
4
127
35
1
44
18
1.58
2135317--2135357
2
21.5
2
90
9
68
51
0
0
48
1.00
2144332--2144364
15
2.1
16
94
5
59
54
0
33
12
1.37
2150431--2150464
15
2.4
14
90
5
50
47
0
0
52
1.00
2150535--2150575
22
1.9
21
85
14
57
31
9
0
58
1.31
2151217--2151284
25
2.6
25
79
6
73
52
1
5
39
1.34
2151577--2151632
23
2.4
24
82
11
71
33
3
1
60
1.24
2162042--2162070
12
2.3
13
94
5
51
48
0
3
48
1.18
2163337--2163487
51
3.0
49
78
7
160
37
5
7
48
1.57
2166523--2166557
17
2.1
17
88
0
52
28
22
22
25
1.99
2167804--2167834
10
3.1
10
90
0
53
0
6
0
93
0.35
2182055--2182100
23
2.0
23
83
8
58
63
2
2
32
1.19
2182127--2182157
16
1.9
16
93
0
53
70
0
0
29
0.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2182196--2182220
12
2.1
12
100
0
50
32
0
0
68
0.90
2182472--2182517
3
15.3
3
100
0
92
32
0
0
67
0.91
2183473--2183507
14
2.3
16
85
14
56
51
2
5
40
1.40
2183722--2183755
14
2.2
16
90
10
54
52
2
5
38
1.41
2186044--2186076
3
11.0
3
100
0
66
66
0
0
33
0.92
2190602--2190630
14
2.0
15
93
6
51
48
3
6
41
1.47
2190896--2190929
14
2.2
16
90
10
54
52
2
5
38
1.41
2191944--2191985
3
14.0
3
85
9
59
28
0
2
69
1.01
2192421--2192454
2
17.0
2
93
0
59
52
0
0
47
1.00
2193258--2193290
3
11.0
3
100
0
66
66
0
0
33
0.92
2204903--2204927
2
12.5
2
100
0
50
52
48
0
0
1.00
2215067--2215256
100
1.9
100
84
4
258
20
31
17
31
1.95
2216789--2217447
330
2.0
330
93
1
1124
31
17
30
20
1.96
2217151--2217530
191
2.0
191
87
3
550
30
17
31
21
1.96
2237297--2237322
2
13.0
2
100
0
52
50
0
0
50
1.00
2240761--2240791
5
6.2
5
100
0
62
38
0
38
22
1.54
2244539--2244575
18
2.0
19
89
5
58
37
0
0
62
0.96
2244596--2244636
20
2.0
21
90
4
66
48
0
0
51
1.00
2245686--2245715
15
1.9
16
93
6
53
50
6
0
43
1.28
2250108--2250146
21
1.9
20
89
5
60
71
2
0
25
0.98
2250352--2250396
24
1.9
24
81
4
56
44
6
0
48
1.29
2252534--2252562
12
2.3
13
94
5
51
51
0
0
48
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2256524--2256557
3
11.3
3
100
0
68
32
0
0
67
0.91
2256553--2256632
4
19.8
4
72
16
58
22
2
3
71
1.14
2256524--2256632
12
9.8
11
77
18
61
25
1
2
69
1.11
2256638--2256672
16
2.2
16
90
10
54
54
0
0
45
0.99
2256662--2256777
59
1.9
60
81
6
137
49
6
6
37
1.54
2256781--2256826
21
2.2
21
96
0
83
60
10
0
28
1.30
2256826--2257062
120
2.0
121
88
0
350
45
6
8
39
1.60
2263673--2263790
61
1.9
61
84
3
157
40
15
10
33
1.81
2263883--2263920
20
1.9
20
88
0
58
23
39
0
36
1.55
2268557--2268597
21
2.0
21
85
0
55
34
7
24
34
1.83
2268569--2268609
21
2.0
20
85
4
55
31
2
26
39
1.70
2273218--2273253
2
18.0
2
94
0
63
50
2
47
0
1.15
2276388--2276413
2
13.0
2
100
0
52
50
0
0
50
1.00
2278745--2278784
2
20.0
2
94
0
71
0
52
0
47
1.00
2278737--2278783
10
4.8
10
94
2
69
0
55
0
44
0.99
2280224--2280253
13
2.3
13
94
0
51
90
0
10
0
0.47
2282272--2282296
2
12.5
2
100
0
50
48
0
0
52
1.00
2284952--2285121
87
2.0
87
92
1
288
46
4
1
47
1.34
2290960--2291037
33
2.4
33
91
0
129
51
10
3
34
1.54
2291269--2291315
2
23.5
2
95
0
85
48
0
48
2
1.13
2295101--2295135
2
17.5
2
87
0
52
51
0
2
45
1.16
2299061--2299086
8
3.2
8
100
0
52
61
11
15
11
1.57
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2301678--2301755
39
2.0
40
87
7
115
38
23
10
28
1.87
2303875--2303934
31
1.9
31
93
0
102
43
0
3
53
1.17
2308378--2308542
84
2.0
84
92
0
276
24
21
18
35
1.95
2311206--2311301
48
2.0
48
95
0
174
20
16
18
43
1.88
2312662--2312701
20
2.0
20
100
0
80
15
10
35
40
1.80
2322295--2322377
34
2.5
32
86
11
107
33
1
10
54
1.43
2335028--2335060
2
16.5
2
100
0
66
0
48
0
51
1.00
2335060--2335091
2
16.0
2
100
0
64
50
0
0
50
1.00
2347745--2347771
13
2.1
13
100
0
54
44
14
18
22
1.86
2352461--2352518
26
2.2
26
79
14
66
46
1
1
50
1.22

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133