Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168470.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_7, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26282861

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   

This is table  45  of  133  ( 15876 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9666544--9666776
36
6.5
35
69
19
58
66
3
1
28
1.15
9666679--9666729
4
12.8
4
84
12
61
76
0
1
21
0.88
9666666--9666735
32
2.2
32
82
10
90
74
1
1
22
0.98
9666505--9666776
16
17.6
15
64
27
67
67
3
1
27
1.17
9668335--9668382
3
16.0
3
82
0
51
0
37
6
56
1.25
9675471--9675503
16
2.1
16
100
0
66
57
12
18
12
1.64
9677535--9677565
6
5.2
6
100
0
62
16
0
16
67
1.23
9677671--9677719
6
8.2
6
100
0
98
16
0
16
67
1.24
9677453--9677701
136
1.8
136
100
0
498
24
10
28
37
1.88
9678773--9678814
15
2.8
15
76
23
52
50
0
0
50
1.00
9681195--9681247
20
2.6
20
80
11
63
62
0
0
37
0.96
9682380--9682423
23
1.9
23
95
0
79
9
9
4
77
1.12
9682380--9682439
23
2.5
24
86
5
77
11
8
3
76
1.12
9683579--9683619
21
1.9
21
85
14
57
24
0
2
73
0.96
9684204--9684242
17
2.5
15
84
12
51
7
2
2
87
0.73
9685443--9685478
16
2.2
16
90
0
54
63
8
0
27
1.23
9686015--9686055
3
13.7
3
100
0
82
65
0
0
34
0.93
9690123--9690147
3
8.3
3
100
0
50
0
36
0
64
0.94
9691031--9691081
25
2.0
26
96
3
95
70
0
1
27
0.98
9691033--9691086
13
4.2
12
79
11
63
75
0
1
22
0.89
9691033--9691087
25
2.2
25
90
6
85
74
0
1
23
0.91
9691623--9691667
24
1.9
24
90
4
74
37
2
4
55
1.32
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9691771--9691826
30
1.9
28
85
7
76
55
1
1
41
1.21
9691928--9691952
2
12.5
2
100
0
50
52
0
0
48
1.00
9694748--9694778
2
15.5
2
100
0
62
0
48
0
51
1.00
9711144--9711199
16
3.5
16
76
11
53
46
0
3
50
1.19
9711908--9711955
20
2.3
21
78
10
53
29
0
2
68
1.01
9712071--9712109
20
2.0
20
85
10
53
53
2
0
43
1.14
9713434--9713469
16
2.2
16
100
0
72
55
0
0
44
0.99
9713574--9713661
30
3.0
29
86
5
131
35
5
2
56
1.35
9713577--9713672
30
3.2
29
85
5
129
36
6
2
55
1.37
9719410--9719434
12
2.1
12
100
0
50
84
0
8
8
0.79
9723881--9723950
32
2.2
32
94
0
122
27
11
8
52
1.66
9725216--9725268
23
2.3
23
86
0
70
35
9
11
43
1.73
9725541--9725575
17
2.1
17
88
0
52
14
0
17
68
1.21
9741577--9741941
183
2.0
183
83
2
453
40
16
12
30
1.86
9742095--9742134
14
2.9
14
80
0
53
55
0
17
27
1.43
9749295--9749334
22
1.9
21
85
10
55
27
2
12
57
1.48
9754079--9754143
17
3.8
18
78
12
66
55
0
1
43
1.09
9759990--9760041
3
17.3
3
91
0
86
36
0
28
34
1.58
9762483--9762528
21
2.2
21
88
7
67
26
2
17
54
1.54
9780035--9780075
20
2.1
20
86
13
59
75
2
17
4
1.08
9780339--9780388
24
2.1
24
82
14
59
64
0
22
14
1.29
9781640--9781681
18
2.3
18
95
0
75
23
16
19
40
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9781676--9781726
10
5.5
10
73
17
56
29
13
7
49
1.70
9781678--9781736
18
3.3
18
90
0
82
28
15
10
45
1.78
9782079--9782117
17
2.2
18
90
4
62
12
2
12
71
1.24
9783074--9783133
23
2.5
25
78
13
63
20
1
8
70
1.22
9783194--9783424
99
2.3
98
87
2
338
41
9
9
38
1.72
9784462--9784540
3
26.3
3
100
0
158
32
0
0
67
0.91
9794668--9794700
3
11.0
3
100
0
66
33
0
0
66
0.92
9794750--9794790
3
13.7
3
94
0
73
63
0
0
36
0.95
9802606--9802667
21
3.0
20
75
11
54
51
17
8
22
1.71
9804210--9804256
24
2.0
24
87
8
69
51
8
6
34
1.58
9806613--9806643
3
10.3
3
92
0
53
64
0
3
32
1.09
9808004--9808038
3
11.7
3
100
0
70
68
0
31
0
0.90
9812395--9812421
6
4.5
6
100
0
54
33
0
66
0
0.92
9820038--9820083
21
2.1
21
84
4
56
52
0
2
45
1.13
9831266--9831313
22
2.2
22
84
0
60
18
0
8
72
1.08
9833241--9833295
27
2.0
27
100
0
110
32
7
3
56
1.44
9836671--9836817
74
2.0
74
91
0
240
48
14
27
8
1.74
9837085--9837452
193
1.9
193
84
6
494
46
7
11
34
1.67
9849163--9849739
83
7.0
82
84
4
660
26
17
14
42
1.87
9849163--9849739
42
14.0
41
84
3
640
26
17
14
42
1.87
9853131--9853160
13
2.3
13
100
0
60
66
0
6
26
1.16
9868393--9868428
2
19.0
2
88
11
58
50
0
0
50
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9869173--9869201
15
2.0
15
93
6
51
48
6
0
44
1.29
9869305--9869346
13
3.2
13
80
6
50
52
0
0
47
1.00
9869219--9869367
59
2.6
54
72
14
127
49
2
0
48
1.12
9877429--9877468
3
13.3
3
89
0
62
35
62
0
2
1.09
9879402--9879426
12
2.1
12
100
0
50
48
8
16
28
1.74
9880574--9880948
190
2.0
183
82
6
457
26
20
12
41
1.87
9886422--9886472
2
25.5
2
87
0
75
49
3
1
45
1.32
9886472--9886496
2
12.5
2
100
0
50
52
48
0
0
1.00
9886543--9886579
2
18.5
2
88
0
56
43
0
51
5
1.24
9888565--9888630
31
2.2
29
83
5
78
39
1
3
56
1.24
9888706--9888766
31
2.0
31
90
3
97
63
4
1
29
1.24
9888929--9888970
18
2.3
19
84
8
52
50
0
0
50
1.00
9889461--9889491
14
2.2
14
94
0
53
41
0
3
54
1.16
9889685--9889745
30
2.1
29
82
14
72
55
9
1
32
1.42
9891793--9891861
35
2.0
35
85
0
93
36
13
11
39
1.80
9893074--9893213
63
2.3
61
80
5
156
32
16
12
38
1.87
9901758--9902655
445
2.0
442
85
3
1192
40
10
11
37
1.76
9902455--9903300
360
2.4
356
84
2
1106
36
12
14
36
1.84
9905373--9905423
21
2.4
21
100
0
102
33
11
21
33
1.90
9913627--9913669
22
2.0
22
90
4
70
55
9
16
18
1.67
9914328--9914360
16
2.1
16
88
5
50
33
0
6
60
1.21
9914998--9915153
57
2.7
60
75
13
164
48
10
7
33
1.67
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9914998--9915133
59
2.3
58
79
9
145
49
11
5
33
1.62
9921112--9921145
15
2.3
15
94
0
59
26
8
0
64
1.22
9922323--9922433
38
2.9
39
76
9
104
36
17
8
38
1.79
9924294--9924330
15
2.4
16
82
13
51
78
5
16
0
0.93
9927066--9927351
40
7.2
39
75
9
143
37
10
12
39
1.78
9927085--9927351
79
3.3
80
76
10
244
37
10
11
40
1.77
9927432--9927489
22
2.6
22
80
0
71
27
13
18
39
1.89
9927672--9927705
9
3.7
9
88
7
50
88
5
0
5
0.64
9928151--9928292
70
2.0
70
79
5
153
22
17
8
51
1.72
9928187--9928292
35
3.0
35
70
10
99
21
16
9
52
1.71
9928266--9928351
35
2.5
35
80
0
100
15
16
13
54
1.71
9928186--9928351
70
2.4
70
83
2
190
18
16
11
53
1.72
9928232--9928493
140
1.9
140
80
3
303
18
16
13
51
1.76
9928301--9928495
70
2.8
69
73
3
183
17
17
13
51
1.77
9928397--9928495
35
2.8
36
74
8
96
18
22
12
47
1.81
9928467--9928647
35
5.2
35
74
7
134
22
20
9
47
1.78
9928467--9928516
17
2.9
16
72
16
55
20
18
12
50
1.78
9928409--9928732
70
4.6
71
73
10
215
21
20
10
47
1.79
9928581--9928670
35
2.6
35
84
7
112
21
22
10
46
1.80
9928684--9928802
35
3.4
35
77
2
114
21
16
10
51
1.74
9928616--9928871
35
7.4
35
70
12
89
21
20
10
47
1.80
9929033--9929115
35
2.4
35
77
0
85
21
20
10
46
1.81
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9929280--9929393
35
3.3
35
72
4
113
21
21
8
48
1.77
9931260--9931322
22
2.9
22
76
4
74
71
0
26
1
0.95
9931260--9931314
4
13.8
4
74
14
51
70
0
27
1
0.97
9931746--9931795
21
2.5
21
81
12
61
66
0
0
34
0.92
9932371--9932428
8
7.2
8
74
0
53
46
24
5
24
1.72
9932370--9932428
16
3.7
16
75
8
66
45
23
6
23
1.76
9932440--9932482
15
3.0
15
86
6
54
39
27
9
23
1.85
9932719--9932760
6
7.0
6
78
10
50
78
2
2
16
0.96
9940052--9940121
27
2.7
25
72
8
59
75
11
8
4
1.16
9940422--9940474
9
5.4
10
80
10
56
75
0
18
5
0.99

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133