Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168470.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_7, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26282861

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   

This is table  133  of  133  ( 15876 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26242412--26242455
4
11.0
4
90
0
52
40
2
6
50
1.42
26242412--26242455
6
7.3
6
84
0
52
40
2
6
50
1.42
26248411--26248445
18
2.1
18
89
10
56
65
0
0
34
0.93
26250866--26250891
2
13.0
2
100
0
52
0
0
50
50
1.00
26251238--26251283
21
2.2
21
96
0
83
45
19
0
34
1.51
26252828--26252885
2
29.0
2
92
0
98
48
0
3
48
1.18
26263624--26263672
26
2.0
24
85
14
66
42
10
18
28
1.83
26264436--26264476
13
2.9
14
80
20
50
34
2
0
63
1.08
26264796--26264849
27
2.0
27
85
10
74
22
0
29
48
1.51
26264841--26264879
16
2.6
16
84
8
55
15
0
30
53
1.42
26265305--26265358
18
3.1
18
80
15
53
70
5
0
24
1.08
26266997--26267036
13
3.1
13
81
0
53
37
2
0
60
1.11
26267443--26267503
18
3.2
18
66
20
52
54
16
6
22
1.65
26267444--26267519
39
1.9
39
97
0
143
52
14
9
23
1.70
26270905--26270946
22
2.0
21
85
4
57
54
0
0
45
0.99
26271328--26271392
27
2.4
27
82
10
80
43
0
0
56
0.99
26271341--26271394
14
4.0
13
79
15
65
37
0
0
62
0.95
26271328--26271392
26
2.4
26
85
10
78
43
0
0
56
0.99
26271375--26271437
24
2.7
24
82
7
76
36
3
3
57
1.31
26275151--26275431
30
9.4
30
74
6
187
21
1
29
46
1.60
26275195--26275313
23
5.4
21
66
20
64
22
1
28
47
1.61
26275114--26275382
60
4.5
60
76
8
210
21
1
29
46
1.60
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26275151--26275402
90
2.8
89
82
5
276
22
1
29
46
1.61
26275289--26275342
14
3.7
14
73
9
54
22
0
24
53
1.46
26275349--26275375
14
1.9
14
100
0
54
14
0
29
55
1.40
26275319--26275388
8
9.2
8
70
17
51
17
0
31
51
1.45
26275399--26275443
21
2.3
19
85
11
63
13
0
31
55
1.38
26275856--26275904
3
16.0
3
78
4
53
36
2
2
59
1.21
26276992--26277369
207
1.8
207
83
7
507
35
13
6
44
1.69
26278119--26278157
20
2.0
20
85
5
53
15
15
7
61
1.55
26278516--26278578
23
2.8
22
83
13
83
76
1
22
0
0.88
26278520--26278599
40
1.9
42
82
12
103
75
5
20
0
0.99
26278517--26278599
43
1.9
42
83
13
107
74
4
20
0
0.99
26278595--26278638
6
6.8
6
80
14
52
77
0
0
22
0.77
26278815--26279187
46
7.9
47
82
6
448
36
21
13
28
1.91
26278816--26279192
93
4.0
94
86
4
477
36
21
12
28
1.91

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133

The End!