Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168470.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_7, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26282861

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   

This is table  15  of  133  ( 15876 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3826407--3826450
23
2.0
22
86
4
61
50
9
2
38
1.47
3827562--3827591
3
10.0
3
92
0
51
30
0
3
66
1.07
3827936--3828541
105
5.9
103
87
4
751
48
11
17
22
1.80
3828062--3828223
51
3.1
51
63
11
121
48
13
15
22
1.80
3827936--3828546
210
3.0
207
86
3
845
48
11
17
22
1.80
3829046--3829186
70
2.0
71
87
5
207
41
12
9
37
1.74
3829115--3829860
58
12.8
59
75
8
607
40
10
6
42
1.65
3829115--3829858
117
6.4
117
77
8
787
40
11
6
42
1.66
3829590--3829648
29
2.0
29
83
6
75
74
1
1
22
1.00
3829887--3829952
5
12.4
5
81
12
62
78
0
4
16
0.90
3829875--3829952
10
6.9
11
77
14
79
78
0
5
16
0.93
3829890--3829952
6
10.5
6
82
17
62
79
0
4
15
0.90
3830506--3830571
6
10.2
6
76
11
51
71
0
1
27
0.95
3830689--3830903
102
2.1
102
86
0
304
47
10
18
23
1.80
3831266--3831982
110
6.5
108
81
3
646
39
17
19
23
1.92
3831249--3831982
220
3.3
216
80
6
735
39
16
19
23
1.92
3831237--3831982
330
2.3
329
82
2
870
40
16
19
23
1.91
3831940--3832004
22
3.0
21
81
4
67
32
15
23
29
1.95
3831829--3832133
132
2.3
133
79
2
312
39
17
19
23
1.92
3832085--3832140
23
2.5
22
77
8
60
33
19
21
25
1.97
3834070--3834108
10
4.1
9
87
9
51
7
5
0
87
0.68
3834673--3834718
14
3.4
13
85
14
58
2
2
6
89
0.64
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3834674--3834718
23
2.0
23
86
0
63
2
2
6
88
0.66
3837623--3837685
31
2.0
31
100
0
126
38
6
12
42
1.68
3840908--3840956
21
2.3
22
79
10
57
38
0
0
61
0.96
3846699--3846740
15
2.8
15
81
0
57
47
2
7
42
1.43
3847524--3847587
24
2.8
22
75
11
58
51
1
6
40
1.36
3847651--3847686
18
2.0
18
88
0
54
33
0
0
66
0.92
3851682--3851725
21
2.1
21
83
8
54
40
6
2
50
1.42
3861895--3861932
10
3.6
11
82
13
53
0
42
0
57
0.98
3866821--3866864
14
3.2
13
81
15
52
9
11
0
79
0.93
3866808--3866864
29
1.9
28
86
10
78
8
15
0
75
1.04
3866835--3866863
8
3.8
8
90
9
51
6
10
0
82
0.83
3866808--3866863
15
3.7
15
80
9
69
8
16
0
75
1.05
3871407--3871477
25
2.8
24
78
8
70
38
8
7
46
1.62
3871535--3871581
16
2.9
16
75
12
60
74
8
0
17
1.05
3883561--3883591
15
2.1
15
100
0
62
29
6
25
38
1.81
3886257--3886314
24
2.4
23
86
8
80
3
20
0
75
0.94
3886263--3886312
14
3.9
13
78
21
61
2
20
0
78
0.86
3887607--3887658
19
2.5
20
78
15
61
51
0
0
48
1.00
3887867--3887934
29
2.4
29
82
4
77
48
2
0
48
1.16
3888231--3888259
2
14.5
2
100
0
58
48
0
0
51
1.00
3889151--3889224
36
2.1
35
85
7
96
43
13
1
41
1.52
3895472--3895637
62
2.7
63
83
6
205
37
10
9
42
1.70
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3897112--3897160
25
1.9
25
83
4
62
26
6
2
65
1.27
3903182--3903441
129
2.0
130
92
0
432
35
22
20
22
1.96
3903405--3903477
36
2.0
37
94
2
130
42
16
15
26
1.87
3903995--3904053
27
2.2
27
90
0
91
35
30
10
23
1.88
3904003--3904057
27
2.0
27
100
0
110
32
25
14
27
1.95
3905780--3905823
15
2.8
16
75
6
54
36
0
0
63
0.95
3905862--3905905
22
2.0
22
82
13
54
22
2
4
70
1.17
3910759--3910792
4
8.2
4
87
6
50
70
0
29
0
0.87
3910761--3910792
13
2.5
13
95
5
57
68
0
31
0
0.90
3910759--3910795
17
2.1
18
90
5
58
70
0
29
0
0.88
3911589--3911629
20
2.0
22
90
9
68
48
7
39
4
1.52
3913298--3913329
2
16.0
2
93
0
55
50
3
0
46
1.17
3928491--3928535
19
2.4
19
85
14
58
6
22
2
68
1.24
3928491--3928527
18
2.0
20
84
10
51
5
24
2
67
1.25
3935291--3935353
22
2.9
22
78
4
56
28
3
4
63
1.30
3935311--3935368
22
2.6
22
78
10
64
34
1
1
62
1.16
3940875--3940905
6
5.2
6
96
0
53
45
51
3
0
1.17
3952325--3952370
24
1.9
25
82
8
60
15
6
13
65
1.46
3952673--3952703
13
2.3
14
94
5
55
22
0
12
64
1.27
3953523--3953562
21
1.9
21
85
10
55
77
5
5
12
1.09
3955129--3955202
16
4.8
16
74
14
57
18
2
29
48
1.62
3955131--3955268
15
9.2
14
74
8
78
19
3
31
45
1.67
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3955162--3955255
38
2.5
37
82
5
125
22
4
28
44
1.71
3955131--3955268
7
18.4
7
74
12
78
19
3
31
45
1.67
3955868--3955894
12
2.2
12
100
0
54
48
7
0
44
1.31
3958530--3958770
96
2.5
96
81
4
263
26
15
23
34
1.94
3959098--3959151
27
1.9
29
82
14
69
7
12
1
77
1.05
3960527--3960565
16
2.3
18
86
8
55
43
10
7
38
1.67
3964307--3964360
4
13.5
4
84
0
63
50
1
22
25
1.59
3973674--3973717
22
2.0
21
91
4
70
22
0
25
52
1.48
3973654--3973725
36
2.0
36
88
0
108
23
0
25
51
1.49
3973691--3973722
14
2.2
15
94
5
57
15
0
25
59
1.36
3973677--3973723
21
2.2
22
84
3
60
21
0
25
53
1.46
3973660--3973740
36
2.2
36
82
0
90
20
1
29
48
1.58
3973660--3973760
36
2.8
36
80
4
87
22
1
27
47
1.62
3973731--3973843
22
4.9
24
73
15
78
21
1
30
46
1.61
3973786--3973847
30
2.1
30
87
6
90
20
0
29
50
1.49
3973739--3973845
46
2.3
46
79
3
117
23
1
28
45
1.63
3974196--3974238
3
14.0
3
85
4
59
30
2
4
62
1.28
3976208--3976237
15
2.0
15
93
0
51
50
0
0
50
1.00
3976292--3976340
24
2.0
24
96
0
89
24
22
4
48
1.67
3981140--3981169
6
5.0
6
91
0
51
83
13
0
3
0.77
3984968--3985001
17
2.1
17
88
5
52
82
0
17
0
0.67
3985447--3985482
6
6.0
6
93
0
54
38
0
11
50
1.38
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3985784--3985847
19
3.3
18
81
16
74
50
0
1
48
1.10
3985793--3985841
21
2.3
21
82
0
71
44
0
2
53
1.12
3991945--3991981
18
2.0
19
89
5
58
18
29
13
37
1.90
3992476--3992605
64
2.0
65
93
1
226
40
12
6
40
1.70
4000874--4000913
18
2.2
19
86
4
55
2
0
15
82
0.77
4007486--4007519
12
3.1
11
91
8
52
82
2
5
8
0.93
4020073--4020098
1
26.0
1
100
0
52
100
0
0
0
0.00
4026086--4026169
26
3.4
26
67
12
77
34
3
5
55
1.41
4026071--4026171
48
2.1
48
94
0
175
32
5
6
54
1.51
4026470--4026510
19
2.2
19
86
8
57
63
0
0
36
0.95
4026464--4026513
17
3.1
16
76
21
50
60
0
0
40
0.97
4026946--4026999
23
2.5
22
79
8
56
59
1
3
35
1.26
4027144--4027290
47
3.1
47
66
16
140
42
3
3
50
1.35
4027110--4027305
95
2.0
97
98
1
378
40
3
3
53
1.32
4031826--4031856
10
3.0
10
95
4
53
38
0
3
58
1.15
4037312--4037340
14
2.1
14
100
0
58
51
6
34
6
1.55
4043239--4043293
12
5.0
11
72
16
51
56
0
0
43
0.99
4043235--4043293
23
2.7
21
80
14
66
57
0
0
42
0.98
4049266--4049415
78
1.9
78
80
0
174
18
6
28
47
1.73
4052262--4052306
23
2.0
24
86
8
67
40
4
0
55
1.20
4056386--4056464
41
1.9
41
82
10
99
44
6
5
44
1.51
4064088--4064131
16
2.5
17
82
10
54
20
4
0
75
0.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4064967--4065015
19
2.6
18
84
12
71
69
2
0
28
1.00
4065346--4065426
30
2.8
30
76
16
89
48
0
3
48
1.19
4065369--4065428
29
2.1
28
84
6
77
51
0
1
46
1.10
4065369--4065437
28
2.5
27
81
11
77
49
0
1
49
1.09
4071684--4071738
28
2.0
29
82
13
71
32
9
14
43
1.77
4072314--4072351
20
1.9
20
88
0
58
63
5
5
26
1.37
4073389--4073494
22
4.9
22
75
11
78
46
11
5
36
1.64
4073412--4073504
42
2.2
43
83
14
122
45
10
5
38
1.62
4073568--4073764
18
10.9
18
66
13
93
46
14
11
27
1.78
4073586--4073782
36
5.4
36
71
8
141
47
14
10
27
1.77

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133