Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168470.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_7, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26282861

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   

This is table  16  of  133  ( 15876 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4073695--4073803
54
2.1
52
84
10
141
48
11
11
28
1.74
4073682--4073864
18
10.1
18
70
12
97
48
11
11
28
1.74
4073608--4073859
72
3.5
71
78
10
260
47
12
11
28
1.76
4073950--4074007
18
3.2
19
82
4
57
44
10
10
34
1.73
4073980--4074021
18
2.3
18
87
0
57
45
14
7
33
1.72
4074564--4074640
15
5.4
15
80
9
90
41
7
20
29
1.81
4075457--4075538
40
2.1
39
84
4
103
10
18
0
70
1.15
4075835--4075867
15
2.1
16
88
11
50
24
9
0
66
1.20
4077328--4077567
3
88.3
3
67
20
64
35
7
2
55
1.40
4077320--4077375
14
4.0
14
79
4
60
30
3
0
66
1.09
4077328--4077375
11
4.3
11
76
5
51
31
2
0
66
1.03
4077342--4077427
8
10.8
8
75
18
56
36
6
2
54
1.40
4077328--4077567
28
8.5
28
68
21
119
35
7
2
55
1.40
4077353--4077583
5
45.2
5
74
14
104
35
7
2
54
1.42
4077342--4077435
23
3.9
24
75
19
81
36
6
2
55
1.37
4077353--4077570
8
25.8
8
70
19
83
35
7
2
54
1.42
4077563--4077593
13
2.5
12
94
5
53
19
0
6
74
1.03
4078020--4078050
9
3.4
9
100
0
62
19
0
19
61
1.35
4078383--4078418
19
1.9
19
88
5
56
16
5
2
75
1.12
4078395--4078447
13
4.2
12
81
11
54
20
1
3
73
1.08
4083160--4083195
10
3.6
10
92
0
54
86
0
2
11
0.68
4083160--4083203
11
4.0
11
82
5
54
81
2
2
13
0.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4084048--4084384
119
2.8
121
78
6
353
22
23
10
43
1.84
4084039--4084487
121
3.7
121
76
5
297
22
23
10
43
1.83
4085110--4085359
3
92.7
3
69
20
97
34
6
2
56
1.40
4085110--4085362
15
17.9
14
73
17
129
34
6
2
56
1.39
4085122--4085197
8
9.2
8
73
25
61
35
7
2
53
1.44
4085121--4085168
11
4.4
11
79
10
62
33
6
2
58
1.35
4085122--4085358
22
10.3
22
69
21
116
35
6
2
54
1.40
4085133--4085355
5
42.2
5
77
12
132
35
6
2
54
1.41
4085129--4085355
21
11.8
19
70
18
107
36
6
2
54
1.40
4085110--4085359
5
46.3
6
76
9
97
34
6
2
56
1.40
4086194--4086229
18
2.1
17
89
5
54
16
5
0
77
0.94
4086188--4086262
24
3.1
23
79
9
71
18
5
2
73
1.15
4086205--4086237
14
2.4
14
90
10
50
18
6
0
75
1.00
4086180--4086249
24
3.0
23
78
10
63
18
7
1
72
1.14
4087444--4087469
12
2.2
12
100
0
52
61
15
0
23
1.33
4090547--4090579
13
2.5
14
90
9
52
51
9
0
39
1.34
4090748--4090808
30
2.0
30
87
6
88
40
4
1
52
1.33
4090792--4090843
17
3.0
17
74
2
50
51
0
1
46
1.12
4094005--4094037
2
16.5
2
100
0
66
0
51
0
48
1.00
4100171--4100195
1
25.0
1
100
0
50
100
0
0
0
0.00
4102966--4103258
146
2.0
145
99
0
577
41
8
7
42
1.63
4102969--4103261
145
2.0
146
98
0
570
41
8
7
42
1.63
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4105163--4105202
19
2.0
20
85
4
55
30
2
2
65
1.19
4105944--4105972
2
15.0
2
92
7
51
51
0
0
48
1.00
4126208--4126232
13
1.9
13
100
0
50
64
4
16
16
1.44
4127060--4127097
2
19.0
2
100
0
76
50
0
50
0
1.00
4129585--4129609
13
1.9
13
100
0
50
24
8
12
56
1.62
4130079--4130125
22
2.3
19
82
10
58
29
2
0
68
1.02
4130368--4130402
16
2.2
17
90
10
56
22
5
2
68
1.24
4130408--4130467
17
3.5
16
77
11
57
40
1
5
53
1.33
4130443--4130508
32
2.1
33
86
11
93
48
1
3
46
1.26
4134892--4134925
12
2.8
12
100
0
68
44
0
14
41
1.45
4142285--4142318
15
2.2
16
89
5
52
61
2
0
35
1.11
4148479--4148552
37
2.0
38
81
7
89
50
1
6
41
1.37
4148521--4148574
28
1.9
28
85
7
74
46
0
5
48
1.25
4148663--4148733
28
2.3
29
81
13
81
52
1
1
45
1.18
4148680--4148752
20
3.7
20
65
15
53
47
1
0
50
1.09
4152681--4152705
6
4.2
6
100
0
50
16
0
0
84
0.63
4160445--4160517
29
2.4
30
84
8
96
49
0
4
46
1.21
4164161--4164190
2
15.0
2
92
0
51
46
0
3
50
1.18
4165379--4165417
18
2.0
20
85
9
55
41
0
10
48
1.37
4166912--4166945
14
2.3
15
90
5
52
2
0
44
52
1.16
4166955--4167044
15
5.7
16
72
16
71
25
0
22
52
1.47
4166942--4166995
16
3.7
15
79
18
60
29
0
18
51
1.46
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4167004--4167046
17
2.6
16
85
10
59
23
0
23
53
1.46
4168081--4168112
15
2.1
15
94
5
55
0
9
0
90
0.45
4168084--4168112
10
3.0
10
95
5
51
0
6
0
93
0.36
4170056--4170107
26
2.0
26
85
7
70
46
11
9
32
1.73
4171970--4172029
31
1.9
32
86
6
88
56
1
3
38
1.26
4175494--4175566
33
2.3
31
82
17
89
61
1
4
32
1.23
4175494--4175565
29
2.3
32
79
18
80
61
1
4
33
1.24
4175695--4175734
14
2.8
15
85
14
50
37
0
0
62
0.95
4177791--4177815
13
1.9
13
100
0
50
24
0
0
76
0.80
4178985--4179130
4
35.5
4
66
15
57
30
4
1
64
1.20
4179049--4179140
22
4.3
21
75
6
80
30
6
2
60
1.34
4179114--4179192
30
2.7
28
75
11
77
25
8
1
64
1.30
4179914--4179954
18
2.3
19
87
8
59
17
24
29
29
1.97
4180066--4180147
17
4.8
17
83
4
103
15
4
0
79
0.90
4180066--4180147
23
3.7
23
82
9
107
15
4
0
79
0.90
4180066--4180147
6
13.5
6
81
12
96
15
4
0
79
0.90
4180181--4180510
58
5.7
57
84
5
389
43
6
12
37
1.70
4180181--4180510
115
2.9
115
86
5
438
43
6
12
37
1.70
4180416--4180506
27
3.2
27
68
17
76
40
3
15
40
1.63
4184165--4184196
15
2.0
17
88
11
50
46
0
3
50
1.17
4189274--4189320
22
2.1
23
88
4
69
31
4
14
48
1.63
4205034--4205534
256
2.0
253
95
2
887
32
18
16
32
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4212032--4212110
29
2.7
29
84
5
97
39
11
0
49
1.39
4214639--4214805
8
21.5
8
64
17
57
20
2
27
49
1.62
4214670--4214773
39
2.7
38
78
11
120
22
1
27
48
1.61
4214739--4214821
39
2.1
40
80
6
98
25
3
21
49
1.66
4214732--4214859
15
8.9
15
65
13
63
25
2
22
50
1.61
4214831--4214887
9
6.9
8
75
15
53
26
1
24
47
1.62
4214846--4214887
9
4.8
9
85
2
59
26
2
26
45
1.66
4214944--4215017
17
4.8
15
75
19
64
17
1
31
50
1.55
4214949--4215017
31
2.2
30
84
5
84
17
1
28
52
1.53
4214955--4215020
8
8.5
8
74
17
50
16
1
30
51
1.54
4214965--4215020
14
3.7
15
77
17
55
17
1
26
53
1.54
4214995--4215099
31
3.5
30
72
8
81
17
2
33
46
1.62
4215465--4215497
16
2.0
17
94
5
59
24
0
0
75
0.80
4218170--4218252
35
2.4
35
81
4
87
48
10
20
20
1.79
4218346--4218420
35
2.1
35
80
4
80
49
10
18
21
1.77
4218509--4218667
70
2.3
70
83
0
183
49
12
20
18
1.79
4218557--4218667
35
3.2
35
74
5
116
48
10
20
19
1.79
4219754--4219830
28
2.8
28
75
0
82
38
16
12
31
1.87
4224627--4224681
28
2.0
28
86
10
78
30
12
16
40
1.86
4224648--4224729
40
2.0
42
83
4
105
37
10
15
35
1.83
4226554--4226588
15
2.3
15
90
5
52
31
11
0
57
1.34
4226611--4226666
29
2.0
28
82
6
69
42
5
21
30
1.75
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4227123--4227221
8
12.8
8
70
10
53
17
3
28
51
1.60
4227292--4227449
15
10.1
14
68
18
55
22
2
23
51
1.61
4227278--4227320
22
2.0
22
82
17
54
23
2
18
55
1.54
4227362--4227421
16
3.8
16
78
6
59
21
0
26
51
1.48
4227312--4227381
24
2.9
23
75
10
68
22
1
22
52
1.55
4227300--4227421
48
2.6
47
83
8
156
20
1
25
52
1.56
4227300--4227433
49
2.8
47
78
9
135
21
2
25
50
1.60
4227396--4227454
16
3.8
16
76
14
61
22
5
20
52
1.65
4227477--4227553
31
2.5
31
82
6
93
16
3
31
48
1.65
4228412--4228474
25
2.6
24
92
2
99
22
6
3
68
1.27

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133