Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168470.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_7, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26282861

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   

This is table  131  of  133  ( 15876 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25746808--25746840
2
16.5
2
100
0
66
48
0
0
51
1.00
25749800--25749850
6
8.8
6
82
8
52
37
45
13
3
1.63
25753294--25753343
19
2.7
18
81
6
55
58
0
2
40
1.10
25753276--25753336
18
3.6
17
79
12
63
55
0
1
42
1.09
25753389--25753471
15
6.0
15
70
22
65
55
2
7
34
1.41
25753388--25753482
29
3.8
25
70
16
72
56
2
6
34
1.36
25753415--25753475
29
2.0
30
84
6
79
55
3
6
34
1.42
25753513--25753571
26
2.3
24
78
16
64
62
5
1
30
1.26
25756054--25756114
30
2.0
30
83
0
77
44
0
1
54
1.10
25759491--25759523
15
2.1
16
94
5
59
81
0
9
9
0.87
25765238--25765266
15
2.0
15
93
6
51
6
6
17
68
1.34
25773355--25773394
10
4.0
10
84
9
55
80
0
2
17
0.83
25774163--25774240
41
1.9
41
82
10
97
38
1
0
60
1.05
25774193--25774241
11
4.2
11
80
12
53
32
2
0
65
1.04
25781449--25781473
12
2.1
12
100
0
50
12
16
8
64
1.49
25788593--25788618
2
13.0
2
100
0
52
50
0
0
50
1.00
25796355--25796402
21
2.2
22
82
10
55
45
10
4
39
1.58
25805109--25805227
60
2.0
60
91
0
193
27
11
32
27
1.92
25808850--25808879
14
2.1
14
93
0
51
90
10
0
0
0.47
25818494--25818525
2
16.0
2
100
0
64
50
0
0
50
1.00
25823146--25823187
22
2.0
22
85
4
59
23
28
9
38
1.86
25826089--25826115
12
2.2
12
100
0
54
85
0
14
0
0.61
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25826321--25826376
2
28.0
2
100
0
112
50
0
50
0
1.00
25833047--25833083
2
18.5
2
100
0
74
51
0
48
0
1.00
25834757--25834785
6
4.8
6
100
0
58
34
17
31
17
1.93
25836079--25836107
2
15.0
2
92
7
51
51
0
0
48
1.00
25838555--25838580
2
13.0
2
100
0
52
50
0
0
50
1.00
25842831--25842862
16
2.0
16
93
0
55
28
0
0
71
0.86
25846428--25846463
2
18.0
2
100
0
72
50
0
0
50
1.00
25850089--25850147
17
3.5
17
71
15
50
44
0
0
55
0.99
25850096--25850168
33
2.2
33
85
4
94
49
0
0
50
1.00
25850177--25850218
21
2.0
21
100
0
84
71
0
0
28
0.86
25850970--25851023
16
3.4
15
85
10
72
44
0
0
55
0.99
25858326--25858564
119
2.0
117
85
6
322
25
8
19
46
1.77
25877985--25878025
15
2.8
14
85
10
55
58
0
2
39
1.11
25878112--25878173
10
6.1
10
75
9
54
58
3
3
35
1.31
25879278--25879624
171
2.0
172
89
0
525
46
12
9
31
1.73
25879899--25879942
21
2.0
22
86
4
63
45
0
0
54
0.99
25885948--25885981
2
17.0
2
100
0
68
50
0
0
50
1.00
25886056--25886097
22
1.9
22
85
0
57
40
16
0
42
1.48
25886347--25886372
12
2.2
12
100
0
52
0
7
0
92
0.39
25886344--25886372
14
2.0
15
93
6
51
0
10
0
89
0.48
25886865--25886898
13
2.6
13
86
13
52
52
0
0
47
1.00
25886690--25887565
218
4.0
219
98
0
1650
45
5
5
43
1.51
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25887811--25887871
31
2.0
31
83
6
79
42
1
0
55
1.09
25887745--25888174
233
1.8
238
90
5
705
42
8
3
44
1.53
25888422--25888454
16
2.1
16
94
0
57
36
6
6
51
1.51
25889197--25889238
8
5.0
8
81
18
50
71
0
0
28
0.86
25895795--25895822
2
14.0
2
100
0
56
50
0
0
50
1.00
25906709--25906745
18
2.0
19
89
5
58
56
0
21
21
1.42
25922959--25922983
7
3.6
7
100
0
50
76
12
12
0
1.04
25926284--25926327
21
2.1
21
82
0
52
13
34
13
38
1.84
25926320--25926345
3
8.7
3
100
0
52
0
34
0
65
0.93
25927334--25927376
21
2.0
23
86
9
63
39
0
0
60
0.97
25928843--25928898
24
2.4
24
90
3
87
23
3
10
62
1.43
25935888--25935950
29
2.2
28
80
11
65
33
7
7
50
1.60
25935951--25936028
22
3.6
22
80
1
77
43
8
1
46
1.43
25935975--25936007
11
3.0
11
100
0
66
45
0
0
54
0.99
25936434--25936462
13
2.3
13
94
5
51
51
3
0
44
1.18
25936543--25936620
38
2.1
38
82
4
95
57
1
1
39
1.15
25953435--25953459
6
4.2
6
100
0
50
0
32
16
52
1.44
25957224--25957382
81
2.0
81
92
0
264
38
11
14
35
1.82
25958440--25958465
2
13.0
2
100
0
52
50
0
0
50
1.00
25960016--25960070
13
4.1
13
75
17
51
5
16
3
74
1.15
25962031--25962055
2
12.5
2
100
0
50
48
0
0
52
1.00
25962407--25962436
2
15.0
2
100
0
60
50
0
0
50
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25963913--25963951
16
2.4
16
82
0
51
35
0
0
64
0.94
25963906--25963954
12
3.8
13
79
20
50
36
0
0
63
0.95
25964279--25964310
6
5.3
6
96
0
55
46
15
34
3
1.62
25969118--25969144
2
13.5
2
100
0
54
48
0
0
51
1.00
25990949--25991039
45
2.0
45
93
0
155
37
7
25
29
1.84
25998462--25998519
4
14.5
4
89
7
91
72
0
1
25
0.94
25998462--25998529
24
2.8
24
93
4
111
69
0
2
27
1.03
25998488--25998529
12
3.5
12
81
12
59
64
0
4
30
1.14
26007430--26007466
9
4.2
9
96
3
67
21
10
32
35
1.88
26012307--26012341
2
17.5
2
100
0
70
51
0
0
48
1.00
26012543--26012599
23
2.5
24
78
13
68
36
5
3
54
1.40
26012537--26012599
22
2.9
22
79
11
67
33
4
3
58
1.35
26013170--26013358
97
2.0
95
88
6
287
37
8
6
47
1.61
26013351--26013415
27
2.8
22
84
13
69
41
9
3
46
1.51
26023304--26023647
170
2.0
170
90
0
544
23
19
11
45
1.83
26025825--26025859
18
1.9
18
100
0
70
37
0
0
62
0.95
26028553--26028616
32
2.0
32
93
0
92
34
4
25
35
1.77
26033818--26033856
7
5.3
7
93
6
60
69
0
2
28
1.02
26037113--26037191
39
2.0
39
92
0
131
37
10
18
32
1.85
26039689--26039713
12
2.1
12
100
0
50
24
8
44
24
1.80
26048080--26048110
2
15.5
2
93
0
53
48
0
0
51
1.00
26049691--26049747
26
2.2
26
84
9
71
47
15
14
22
1.82
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26050716--26050757
20
2.2
19
86
4
57
73
0
0
26
0.83
26051464--26051498
2
17.5
2
100
0
70
51
0
0
48
1.00
26055878--26055941
29
2.2
29
83
5
76
54
10
7
26
1.62
26056185--26056216
11
2.9
11
95
0
55
25
0
9
65
1.22
26059271--26059758
14
35.4
14
69
15
164
41
5
10
42
1.63
26059275--26059994
12
60.6
12
67
19
122
40
6
10
42
1.66
26059277--26059365
10
8.5
10
69
9
61
47
6
4
41
1.50
26059265--26059372
30
3.5
30
79
9
126
48
8
3
39
1.51
26059317--26060002
10
66.7
10
69
12
245
40
6
10
42
1.66
26059384--26059705
26
11.9
26
72
14
89
39
4
12
42
1.64
26059275--26062115
22
129.3
22
69
10
451
38
6
11
43
1.65
26059437--26059675
6
40.5
6
72
18
164
39
3
12
44
1.60
26059713--26059766
26
2.1
26
82
0
63
46
12
5
35
1.66
26059832--26059918
42
2.1
40
89
4
129
43
13
6
35
1.71
26060110--26062108
10
199.3
10
70
11
869
38
5
11
45
1.62
26060110--26062126
16
123.9
16
69
8
827
37
5
11
45
1.62
26060199--26060304
12
8.8
12
81
0
77
45
12
4
37
1.63
26060264--26060406
12
11.6
12
75
11
83
41
9
7
40
1.67
26060110--26062126
18
110.3
18
71
8
922
37
5
11
45
1.62
26061928--26061961
12
2.8
12
86
0
50
41
8
8
41
1.67
26062013--26062078
35
1.9
34
87
3
96
40
9
7
42
1.65
26062170--26062251
12
6.5
12
74
10
74
46
8
4
40
1.56
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26062159--26062196
14
2.7
14
91
0
58
52
15
0
31
1.43
26062207--26062246
14
2.9
14
92
0
62
45
5
2
47
1.38
26062659--26062688
15
2.0
15
93
0
51
23
6
0
70
1.11
26062668--26062728
24
2.5
24
76
10
70
19
4
4
70
1.24
26062657--26062733
22
3.3
23
70
22
63
19
6
3
70
1.26
26066595--26066640
11
4.1
11
86
8
58
86
0
10
2
0.64
26066598--26066636
8
4.6
8
84
9
51
87
0
10
2
0.65
26066590--26066636
19
2.5
19
76
13
60
82
0
12
4
0.80
26066925--26066980
26
2.2
25
84
9
69
80
7
5
7
1.02
26066926--26066994
17
4.0
17
74
10
52
81
4
8
5
0.99

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133