Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167949.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_21, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19848060

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   

This is table  134  of  138  ( 16447 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19203796--19203838
2
21.5
2
85
0
50
39
0
9
51
1.34
19208030--19208069
12
3.3
12
89
0
53
22
17
20
40
1.92
19211062--19211113
17
3.2
17
72
5
54
51
0
0
48
1.00
19211980--19212027
15
3.1
15
80
11
53
75
0
0
25
0.81
19211980--19212019
6
6.5
6
82
5
53
75
0
0
25
0.81
19212006--19212086
41
2.0
40
81
11
96
71
6
4
17
1.25
19213108--19213149
3
15.0
3
85
14
63
66
0
0
33
0.92
19215468--19215552
20
4.4
19
75
16
70
51
7
8
32
1.59
19221195--19221419
114
2.0
114
87
3
328
32
15
22
29
1.95
19227347--19227409
30
2.1
30
82
11
76
47
9
9
33
1.68
19229538--19229562
9
2.8
9
100
0
50
48
0
0
52
1.00
19233593--19233659
34
2.0
34
88
5
100
43
11
20
23
1.85
19252679--19252748
28
2.5
28
95
0
122
21
1
28
48
1.59
19255861--19255937
35
2.2
35
86
4
102
35
19
9
36
1.84
19256029--19256384
63
5.7
61
75
8
239
34
13
11
39
1.82
19256156--19256385
127
1.8
124
85
4
318
34
13
11
40
1.80
19256611--19256789
63
2.9
60
77
12
184
34
16
11
36
1.86
19257437--19257467
15
2.1
15
94
5
55
58
0
6
35
1.24
19257493--19257525
17
1.9
18
88
11
52
42
3
0
54
1.15
19269153--19269192
20
2.0
20
100
0
80
15
10
15
60
1.60
19272716--19272812
37
2.6
37
80
3
106
46
5
20
27
1.72
19273231--19273263
3
11.0
3
93
0
57
33
0
3
63
1.10
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19273681--19273723
19
2.3
18
81
18
52
16
6
9
67
1.40
19274999--19275333
160
2.1
160
84
3
431
40
15
9
34
1.79
19279206--19279359
3
53.7
3
74
13
128
33
2
2
61
1.23
19279285--19279358
5
14.2
5
81
13
71
33
1
1
63
1.11
19280164--19280246
26
3.4
25
74
21
77
21
2
1
74
1.00
19280158--19280239
6
12.6
7
73
22
56
23
2
2
71
1.09
19290856--19290958
45
2.3
44
85
6
129
58
12
13
15
1.64
19293265--19293349
6
13.5
6
75
16
57
21
2
2
74
1.05
19293272--19293346
19
3.9
18
75
11
69
24
1
2
72
1.06
19293278--19293350
26
3.0
24
76
21
71
23
1
4
71
1.11
19298165--19298332
90
1.9
90
88
2
257
33
11
18
36
1.87
19298629--19298675
21
2.1
21
84
7
58
76
0
19
4
0.95
19301815--19301839
13
1.9
13
100
0
50
40
0
0
60
0.97
19301993--19302026
2
17.0
2
100
0
68
50
0
0
50
1.00
19305454--19305496
14
3.0
15
83
6
54
41
16
2
39
1.61
19306080--19306110
2
15.5
2
100
0
62
51
0
0
48
1.00
19309356--19309385
12
2.5
12
94
0
51
36
20
13
30
1.90
19309812--19309856
22
2.0
22
95
0
81
42
8
17
31
1.80
19318488--19318518
2
15.5
2
100
0
62
48
0
0
51
1.00
19323695--19323745
20
2.5
20
81
9
59
27
0
1
70
0.98
19324027--19324158
52
2.5
52
86
1
183
37
8
26
28
1.85
19326892--19326927
2
18.0
2
94
0
63
52
0
0
47
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19331121--19331162
14
3.1
14
73
13
52
61
7
11
19
1.52
19332717--19332773
24
2.4
24
84
0
69
47
14
3
35
1.61
19342772--19342847
15
5.1
15
79
16
54
84
1
7
6
0.84
19342772--19342847
18
4.0
18
76
10
64
84
1
7
6
0.84
19342803--19342847
7
6.4
7
85
10
56
88
0
8
2
0.58
19342772--19342852
17
4.6
17
73
13
65
82
2
7
7
0.91
19344355--19344419
22
2.9
22
81
4
76
33
6
15
44
1.71
19344353--19344426
23
3.3
23
75
11
71
37
6
13
41
1.71
19344461--19344524
23
2.8
24
71
20
64
40
3
15
40
1.63
19344464--19344538
22
3.2
24
71
19
68
37
4
14
44
1.64
19344331--19344615
99
3.0
91
77
11
268
35
6
15
42
1.72
19344438--19344615
46
3.8
45
79
7
187
33
5
17
43
1.72
19344777--19344804
14
2.0
14
100
0
56
28
7
0
64
1.20
19345145--19345202
18
3.2
18
85
9
66
32
15
10
41
1.81
19345091--19345209
55
2.2
54
77
3
123
33
15
12
37
1.86
19349022--19349142
61
2.0
61
85
0
161
28
16
20
34
1.94
19359515--19359551
15
2.4
16
90
4
58
13
16
0
70
1.17
19369958--19369997
16
2.5
16
83
0
53
25
5
0
70
1.08
19385977--19386013
15
2.4
16
90
4
58
13
16
2
67
1.34
19394835--19394870
2
18.0
2
100
0
72
50
0
0
50
1.00
19394870--19394917
2
24.0
2
95
0
87
47
0
52
0
1.00
19396492--19396531
16
2.5
16
83
0
53
25
5
0
70
1.08
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19399917--19400081
85
1.9
86
80
6
192
40
17
16
26
1.90
19402758--19402833
33
2.3
33
82
8
84
28
15
14
40
1.87
19409920--19409966
13
3.5
13
80
11
58
42
0
8
48
1.33
19409961--19410068
3
36.0
3
70
23
68
34
3
4
57
1.37
19410056--19410094
19
2.0
20
85
5
53
38
7
0
53
1.30
19410098--19410129
3
10.7
3
93
0
55
34
28
0
37
1.57
19410938--19411010
5
15.0
5
75
13
55
21
1
1
75
0.96
19410931--19411009
12
6.8
11
72
22
56
20
2
1
75
0.98
19410939--19411008
18
3.9
17
80
16
72
21
1
1
75
0.96
19410939--19410997
4
13.8
4
78
21
50
22
1
1
74
1.00
19410959--19410999
17
2.4
17
88
8
57
24
0
0
75
0.80
19423103--19423132
13
2.3
13
94
0
51
46
0
3
50
1.18
19423114--19423190
12
6.3
12
78
13
59
37
2
5
54
1.37
19423164--19423255
3
32.7
3
73
16
63
35
4
1
58
1.25
19423175--19423222
19
2.5
19
83
10
53
33
4
2
60
1.27
19424083--19424129
16
2.9
16
96
3
85
23
6
0
70
1.10
19424920--19424956
19
1.9
19
100
0
74
32
10
24
32
1.90
19425727--19425807
39
2.1
39
81
11
94
27
7
12
53
1.65
19427757--19427782
3
8.7
3
100
0
52
65
0
0
34
0.93
19428034--19428082
19
2.4
22
83
12
61
61
0
0
38
0.96
19428035--19428091
27
2.1
27
80
6
62
64
1
0
33
1.04
19432106--19432625
63
8.2
62
72
13
287
33
11
14
40
1.82
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19432265--19432594
127
2.6
127
78
11
334
31
14
13
40
1.84
19432108--19432625
126
4.1
125
75
9
410
33
11
14
41
1.82
19433205--19433347
62
2.3
63
89
6
211
39
17
13
29
1.89
19433053--19433379
62
5.3
62
71
10
175
34
14
14
36
1.87
19436968--19437030
30
2.1
30
82
11
76
53
6
6
33
1.51
19442910--19442963
23
2.3
24
81
15
69
53
5
1
38
1.35
19443118--19443159
20
2.0
21
90
4
68
42
14
0
42
1.45
19447115--19447194
20
3.9
20
83
6
97
56
8
15
20
1.65
19452864--19452907
3
14.7
3
85
0
61
61
2
2
34
1.21
19467673--19467786
29
3.9
28
77
5
93
57
6
3
33
1.41
19467764--19467846
34
2.4
34
84
7
107
65
2
4
27
1.26
19467764--19467846
35
2.5
33
82
11
98
65
2
4
27
1.26
19467958--19467991
9
3.7
9
88
4
50
64
2
0
32
1.08
19468026--19468101
17
4.5
17
73
14
59
72
3
3
19
1.17
19468029--19468101
26
2.8
25
77
16
69
71
4
4
20
1.20
19468702--19468742
6
6.8
6
84
15
50
80
2
0
17
0.82
19468702--19468749
25
2.0
25
91
4
80
79
2
2
16
0.93
19469127--19469161
10
3.6
10
92
3
54
77
8
0
14
0.99
19469219--19469274
19
2.8
19
82
15
60
53
28
1
16
1.53
19469610--19469671
18
3.4
18
78
10
56
70
1
1
25
1.05
19470111--19470464
186
1.9
186
89
1
557
46
14
18
19
1.83
19470309--19471084
119
6.5
119
77
3
637
45
15
19
18
1.85
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19470327--19471079
238
3.2
235
81
3
821
45
15
19
18
1.85
19482226--19482267
16
2.7
15
85
10
50
85
0
2
11
0.68
19482634--19482681
21
2.3
22
78
10
55
64
10
6
18
1.45
19483064--19483094
4
8.0
4
92
7
55
74
0
25
0
0.82
19483360--19483394
17
1.9
18
88
11
54
31
5
2
60
1.35
19483367--19483402
17
2.2
17
90
5
56
27
5
5
61
1.41
19483535--19483592
27
2.1
27
81
12
66
17
10
3
68
1.31
19483579--19483637
19
3.3
19
79
11
72
16
0
10
72
1.10
19486123--19486191
25
2.8
25
75
14
72
33
0
2
63
1.09
19486148--19486202
25
2.2
25
77
6
58
41
0
1
56
1.10

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138