Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167949.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_21, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19848060

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   

This is table  23  of  138  ( 16447 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6071869--6071923
23
2.5
22
80
13
67
3
16
0
80
0.86
6077020--6077101
41
2.0
41
85
7
112
14
10
25
48
1.76
6078524--6078597
33
2.2
33
88
9
107
48
4
27
20
1.67
6078522--6078629
33
3.3
33
81
10
105
49
3
25
21
1.66
6081545--6081582
19
2.0
19
94
0
67
52
18
5
23
1.65
6082813--6082866
24
2.2
24
87
6
74
37
25
1
35
1.67
6082829--6082878
24
2.1
24
92
0
82
38
22
4
36
1.73
6083555--6083592
17
2.2
18
90
4
60
28
15
10
44
1.80
6092530--6092577
25
1.9
25
86
0
69
50
25
2
22
1.60
6093245--6094681
186
7.7
185
83
4
1458
40
10
13
35
1.80
6093248--6094681
373
3.9
372
83
5
1598
40
10
13
35
1.80
6093245--6094669
559
2.6
558
85
3
1773
40
10
13
35
1.80
6100260--6100429
59
2.9
58
85
7
218
34
14
7
42
1.74
6100815--6100866
20
2.6
20
85
8
70
23
21
26
28
1.99
6100857--6100896
11
3.7
11
83
6
55
20
27
35
17
1.95
6100900--6100940
19
2.1
20
90
4
66
19
21
31
26
1.97
6101328--6101436
43
2.4
45
77
5
116
62
6
7
23
1.45
6101419--6101457
3
13.7
3
89
10
64
71
0
0
28
0.86
6110914--6110973
24
2.5
24
86
13
95
51
11
8
28
1.67
6110974--6111063
24
3.9
25
74
24
83
53
16
4
25
1.62
6110974--6111063
25
3.9
24
79
19
86
53
16
4
25
1.62
6110980--6111063
44
1.9
43
88
7
125
54
15
3
26
1.57
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6110980--6111043
19
3.1
19
74
23
65
54
17
1
26
1.51
6111118--6111197
22
3.9
21
72
19
78
48
7
6
37
1.57
6111121--6111278
24
6.8
24
68
20
97
50
8
6
35
1.58
6111226--6111301
24
3.7
20
77
10
73
51
7
3
36
1.50
6111262--6111330
20
3.7
18
78
16
52
50
11
4
33
1.58
6111395--6111441
22
2.1
22
84
7
60
59
10
6
23
1.53
6111511--6111573
24
2.6
24
83
11
83
74
6
3
15
1.15
6111492--6111573
6
13.3
6
73
14
60
74
4
3
17
1.14
6113178--6113229
3
17.7
3
78
11
54
69
0
3
26
1.06
6117131--6117448
132
2.4
131
80
5
356
25
19
15
40
1.90
6117346--6117398
22
2.5
21
81
6
70
33
16
15
33
1.90
6117468--6117563
22
4.4
22
81
0
102
30
26
15
28
1.96
6117349--6117881
175
3.0
177
83
3
675
24
20
17
37
1.93
6117819--6117883
22
3.0
22
78
10
62
29
24
15
30
1.96
6118078--6118121
22
2.0
23
86
4
63
84
11
2
2
0.81
6119385--6119429
8
5.5
8
78
5
54
20
0
0
80
0.72
6119508--6119580
3
24.7
3
80
13
80
69
1
1
27
1.04
6119697--6119738
3
14.0
3
82
9
50
66
0
2
30
1.04
6119695--6119739
15
2.9
16
83
6
58
66
0
2
31
1.04
6119992--6120255
30
9.3
30
71
15
152
46
33
1
18
1.59
6120023--6120065
22
2.0
22
95
0
77
46
30
0
23
1.52
6120055--6120224
57
2.9
59
76
10
163
47
31
2
18
1.61
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6120195--6120291
21
4.2
21
71
22
70
50
32
0
16
1.45
6120205--6120260
28
2.0
29
86
6
80
53
28
0
17
1.44
6120233--6120295
22
2.9
22
83
6
76
50
30
0
19
1.47
6122037--6122086
17
3.2
16
83
10
52
12
12
6
70
1.34
6122045--6122086
14
2.8
16
79
20
54
14
9
4
71
1.28
6122055--6122099
20
2.3
19
81
7
54
11
8
6
73
1.25
6122143--6122235
13
7.4
12
75
9
87
66
7
0
25
1.18
6122106--6122252
19
7.9
18
76
8
107
65
9
0
23
1.26
6122107--6122252
25
5.9
24
74
6
112
65
9
0
23
1.27
6122107--6122268
6
25.8
6
73
6
72
64
10
1
23
1.32
6122149--6122269
38
3.2
37
80
8
127
63
9
0
25
1.31
6123435--6123497
21
3.0
21
83
0
72
34
15
9
39
1.80
6123745--6123790
22
2.1
22
87
0
65
50
6
0
43
1.28
6127519--6127574
29
1.9
29
96
0
103
48
3
17
30
1.65
6129896--6130040
52
2.8
51
86
4
191
26
24
7
42
1.81
6130344--6130412
25
2.7
26
75
6
79
23
33
7
36
1.82
6131011--6131166
52
3.0
50
84
7
186
26
19
8
44
1.80
6131191--6131230
11
3.6
11
86
0
53
60
15
0
25
1.35
6131336--6131366
2
15.5
2
100
0
62
48
0
0
51
1.00
6136555--6136586
2
16.0
2
93
0
55
53
0
0
46
1.00
6141970--6142013
22
2.0
22
90
0
70
34
11
13
40
1.81
6142249--6142313
26
2.5
26
94
0
112
16
27
13
41
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6142298--6142357
25
2.4
25
77
0
66
20
28
18
33
1.96
6146036--6146079
22
2.0
22
86
0
61
34
9
13
43
1.76
6150929--6150971
2
22.0
2
95
4
79
48
0
0
51
1.00
6163188--6163497
125
2.5
123
77
6
306
32
8
10
48
1.68
6164898--6164938
19
2.2
19
86
0
55
14
0
7
78
0.96
6164946--6165016
3
23.7
3
88
0
106
29
0
5
64
1.16
6165561--6165605
15
3.1
15
83
3
56
75
4
2
17
1.07
6175445--6175470
13
2.0
13
100
0
52
76
7
0
15
0.99
6175641--6175713
5
14.4
5
77
18
55
78
1
5
15
1.00
6175641--6175728
30
2.8
30
76
20
83
75
1
6
17
1.08
6175670--6175714
6
7.5
6
80
9
56
82
2
2
13
0.86
6175737--6175793
26
2.3
26
85
11
75
80
5
1
12
0.95
6176609--6176653
22
2.1
22
83
4
56
66
0
8
24
1.20
6176617--6176672
23
2.5
23
82
2
69
66
0
7
26
1.18
6176646--6176733
22
4.1
22
76
12
78
71
0
3
25
1.01
6176679--6176733
14
3.9
15
77
20
57
76
0
1
21
0.88
6176675--6176729
19
2.9
20
86
10
80
76
0
3
20
0.94
6176679--6176727
7
7.1
7
76
19
50
79
0
2
18
0.83
6176778--6176814
12
3.0
12
96
4
65
83
0
0
16
0.64
6176975--6177054
1
80.0
1
72
0
61
0
1
12
86
0.64
6176975--6177054
14
5.7
14
84
0
106
0
1
12
86
0.64
6176970--6177051
27
3.1
26
86
10
112
0
2
13
84
0.73
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6176970--6177054
42
2.0
41
88
2
125
0
2
12
84
0.71
6177061--6177474
42
10.0
40
86
9
530
37
22
18
22
1.94
6177061--6177474
82
5.0
83
87
8
578
37
22
18
22
1.94
6177096--6177468
127
3.0
127
91
5
593
37
21
18
22
1.94
6178726--6178751
10
2.6
10
100
0
52
0
11
0
88
0.52
6178727--6178759
16
2.1
16
88
11
50
3
9
0
87
0.63
6182535--6182560
13
2.0
13
100
0
52
76
7
0
15
0.99
6182596--6182770
58
2.9
59
81
13
232
34
13
7
44
1.72
6182790--6182862
5
14.4
5
78
18
64
78
0
5
16
0.94
6182790--6182877
30
2.8
31
78
14
92
75
0
6
18
1.02
6182819--6182863
6
7.5
6
80
9
56
82
0
2
15
0.77
6182787--6182851
19
3.4
18
78
19
69
78
0
4
16
0.91
6182886--6182936
26
1.9
27
88
4
77
82
3
1
11
0.89
6182889--6182937
22
2.1
22
85
7
62
83
4
2
10
0.85
6183264--6183302
19
2.0
20
90
5
62
35
20
20
23
1.96
6183767--6183811
22
2.1
22
83
4
56
66
0
8
24
1.20
6183837--6183893
21
2.7
22
84
15
84
78
0
0
21
0.74
6183839--6183891
7
7.7
7
82
17
67
81
0
0
18
0.70
6183839--6183891
27
2.0
26
89
10
81
81
0
0
18
0.70
6183940--6183975
12
3.1
12
88
4
56
80
0
0
19
0.71
6195070--6195236
85
2.0
84
84
1
217
30
15
13
40
1.86
6195068--6195242
41
4.2
40
80
9
181
30
14
13
41
1.84
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6195214--6195296
42
2.0
42
85
4
114
30
10
16
42
1.83
6195488--6195526
16
2.4
16
87
8
53
82
2
2
12
0.89
6204141--6204173
2
16.5
2
100
0
66
51
0
0
48
1.00
6213135--6213370
114
2.1
112
86
4
323
50
7
8
33
1.61
6213113--6213370
57
4.6
54
76
11
247
48
7
8
35
1.62
6213291--6213460
92
1.9
90
82
7
218
47
10
7
34
1.67
6213375--6213530
56
2.8
55
85
3
181
47
8
7
36
1.62
6222161--6222200
20
2.0
20
85
0
53
40
7
7
45
1.61
6223063--6223156
28
3.4
28
64
14
68
44
6
9
39
1.63
6222808--6223164
56
6.4
55
78
7
321
47
8
9
34
1.67

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138