Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167949.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_21, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19848060

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   

This is table  29  of  138  ( 16447 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7036098--7036156
29
2.0
29
90
0
91
54
6
8
30
1.57
7036121--7036197
22
3.5
22
71
11
61
54
6
3
35
1.45
7036121--7036452
43
7.8
43
68
16
131
49
5
7
38
1.53
7036138--7036251
22
5.2
23
73
14
80
46
4
7
42
1.51
7036276--7036367
22
4.2
22
70
12
66
52
4
6
36
1.47
7039171--7039203
17
1.9
17
88
11
50
45
0
0
54
0.99
7039284--7039315
16
2.1
15
94
5
55
59
6
9
25
1.52
7042134--7042177
17
2.6
16
83
16
54
56
20
4
18
1.58
7044441--7044475
14
2.5
14
100
0
70
8
68
0
22
1.16
7052447--7052489
21
2.1
21
82
4
52
39
4
0
55
1.20
7054323--7054354
17
1.9
17
93
6
57
28
12
0
59
1.34
7058811--7058900
33
2.8
30
77
13
83
64
5
2
27
1.28
7058826--7058904
30
2.7
29
86
4
95
67
2
2
27
1.17
7061723--7061768
24
1.9
24
86
0
65
41
21
2
34
1.66
7066997--7067030
16
2.1
17
94
5
61
5
0
8
85
0.75
7070101--7070130
15
2.1
15
93
6
53
70
6
6
16
1.31
7072287--7072321
18
1.9
18
88
0
52
34
0
8
57
1.29
7074332--7074366
11
3.1
11
84
8
52
20
2
14
62
1.43
7074496--7074540
24
1.9
23
90
4
72
71
4
24
0
1.05
7083516--7083570
22
2.5
22
77
16
53
20
3
5
70
1.22
7085167--7085211
23
2.0
23
86
8
65
8
17
0
73
1.08
7085181--7085211
16
1.9
16
93
0
53
12
16
0
70
1.16
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7088402--7088435
17
2.0
17
88
0
50
29
2
0
67
1.05
7091458--7091497
16
2.4
17
91
8
73
75
0
15
10
1.05
7091458--7091516
16
3.8
16
82
10
70
74
0
13
11
1.07
7091455--7091531
23
3.4
20
76
20
64
75
0
15
9
1.04
7091475--7091532
26
2.1
26
81
9
62
75
0
15
8
1.02
7092563--7092963
32
12.6
32
72
8
172
16
18
14
50
1.78
7092667--7092871
96
2.1
96
88
0
302
16
17
14
52
1.75
7092573--7092818
64
3.9
62
73
6
197
16
19
14
50
1.79
7092684--7092963
96
2.9
94
78
6
262
16
17
13
52
1.75
7093036--7093151
33
3.5
32
79
11
126
27
14
10
47
1.77
7093659--7093695
17
2.1
19
85
10
51
37
0
29
32
1.58
7100819--7100900
38
2.2
38
90
0
128
46
12
7
34
1.69
7102097--7102178
42
2.0
42
95
0
146
41
10
7
40
1.68
7103049--7103255
103
2.0
103
95
0
371
50
8
12
28
1.69
7106570--7106789
18
11.1
20
70
16
131
53
1
1
43
1.20
7106584--7106735
23
6.6
23
68
19
84
53
1
1
43
1.20
7106676--7106788
23
4.6
23
77
17
102
53
0
0
45
1.06
7106851--7106899
17
2.8
17
81
9
55
48
0
0
51
1.00
7106823--7106890
17
3.6
20
70
23
58
48
0
0
51
1.00
7106827--7106912
16
5.1
16
70
20
52
50
1
0
48
1.08
7107065--7107099
14
2.5
14
85
0
52
40
8
0
51
1.33
7118694--7118733
2
20.5
2
94
5
73
50
0
0
50
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7120676--7120705
3
10.0
3
100
0
60
66
0
0
33
0.92
7124510--7124576
33
2.0
33
83
11
84
28
2
10
58
1.46
7128539--7128577
19
2.1
19
85
9
53
12
0
10
76
1.01
7128525--7128574
25
2.0
26
92
4
84
14
0
12
74
1.09
7128765--7129144
104
3.6
106
79
3
378
35
12
14
38
1.84
7128765--7129143
105
3.6
105
80
3
374
35
12
14
38
1.83
7129177--7129478
104
2.9
102
79
7
317
36
10
13
40
1.78
7129632--7129676
23
2.0
23
81
0
54
28
15
22
33
1.95
7130025--7130213
84
2.2
85
82
2
211
34
12
19
33
1.88
7131666--7131692
13
2.1
13
100
0
54
0
7
7
85
0.75
7134484--7134744
131
2.0
131
93
0
441
34
14
22
27
1.94
7135050--7135107
28
2.1
28
100
0
116
44
6
0
48
1.29
7143208--7143283
27
2.8
28
88
4
111
38
15
2
43
1.61
7143208--7143284
28
2.8
27
86
3
109
37
15
2
44
1.61
7154472--7154548
37
2.1
37
82
4
93
32
3
3
59
1.34
7164387--7164527
36
4.1
36
70
22
106
53
1
0
44
1.14
7164430--7164574
21
7.4
20
71
19
101
55
2
0
42
1.16
7164380--7164518
32
4.1
35
70
23
86
53
1
0
44
1.14
7170401--7170474
36
2.1
36
84
0
94
40
10
13
35
1.80
7174655--7174698
18
2.4
19
81
14
56
29
20
25
25
1.99
7176270--7176308
19
2.1
19
90
0
60
28
0
2
69
1.02
7178562--7178711
34
4.4
35
87
3
164
42
12
9
36
1.74
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7181651--7181881
61
3.5
62
70
18
171
45
16
9
29
1.78
7181536--7181879
137
2.5
137
88
1
489
45
15
10
29
1.78
7182101--7182186
35
2.5
35
84
3
111
36
13
12
37
1.84
7182125--7182193
35
2.0
35
88
0
102
42
15
10
31
1.81
7182557--7182598
16
2.5
17
84
7
59
21
7
2
69
1.25
7186432--7186463
9
3.6
9
91
0
55
12
0
3
84
0.74
7189361--7189399
13
3.2
12
86
10
53
25
0
2
71
0.98
7189354--7189435
24
3.5
23
72
9
60
25
1
4
68
1.17
7190483--7190521
14
2.8
14
88
0
51
64
2
2
30
1.21
7190364--7190656
59
5.0
59
80
11
361
48
5
10
36
1.60
7190882--7190920
15
2.6
15
84
8
53
25
0
0
74
0.82
7191199--7191245
21
2.3
20
85
3
58
17
2
12
68
1.31
7191894--7191934
21
1.9
22
95
5
75
46
9
0
43
1.36
7191916--7192328
60
7.0
58
82
6
478
48
5
9
36
1.59
7195445--7195640
97
2.0
97
96
0
365
29
5
19
45
1.72
7196483--7196537
8
6.8
8
82
12
58
83
0
9
7
0.81
7196481--7196515
17
2.1
17
94
0
61
82
0
8
8
0.83
7196484--7196529
17
2.7
16
83
12
56
86
0
4
8
0.68
7197494--7197740
63
4.0
64
73
12
169
38
12
14
34
1.85
7197523--7197618
42
2.3
42
83
3
113
37
12
14
35
1.84
7197540--7197622
43
2.0
42
90
2
130
37
10
15
36
1.83
7197523--7197740
20
10.8
20
72
11
122
38
12
15
33
1.84
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7197585--7197857
59
4.6
58
78
8
282
39
10
15
33
1.83
7197642--7197737
20
4.8
20
87
2
138
40
12
12
34
1.81
7197642--7197737
41
2.4
40
89
1
138
40
12
12
34
1.81
7197518--7197799
119
2.3
123
87
3
394
37
11
15
34
1.84
7197829--7197875
21
2.3
20
82
7
58
46
12
4
36
1.62
7197839--7197878
21
1.9
21
94
0
71
45
10
7
37
1.66
7197900--7198317
114
3.7
114
92
0
667
33
13
16
35
1.89
7198715--7198818
45
2.4
44
81
10
115
24
8
16
50
1.72
7198751--7198861
44
2.5
44
85
2
132
22
10
18
48
1.78
7198781--7198886
45
2.4
44
82
1
122
24
13
19
42
1.87
7198906--7198937
11
3.0
11
95
4
57
84
0
6
9
0.78
7199821--7200110
119
2.4
120
79
10
319
46
7
10
35
1.66
7199820--7200109
59
4.9
58
76
9
257
47
7
9
35
1.65
7211996--7212356
44
8.3
44
76
11
318
25
11
17
45
1.81
7212080--7212153
36
2.1
36
92
0
121
24
12
13
50
1.76
7212116--7212409
45
6.5
45
82
1
295
25
9
18
45
1.80
7212116--7212418
90
3.4
88
80
7
326
26
10
18
45
1.81
7213041--7213066
11
2.4
11
100
0
52
38
11
7
42
1.70
7213703--7214066
60
6.2
60
77
9
338
48
5
10
35
1.59
7215544--7215584
20
2.0
20
85
0
55
70
4
0
24
1.06
7215560--7215599
17
2.2
19
86
8
57
72
10
0
17
1.11
7215618--7215652
9
3.8
9
96
3
61
68
11
0
20
1.20
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7215726--7215786
19
3.2
20
81
6
81
55
0
3
40
1.16
7215974--7216038
34
1.9
33
84
3
85
24
3
3
69
1.17
7216033--7216084
26
2.0
27
92
3
88
38
3
1
55
1.29
7216061--7216124
19
3.3
19
75
18
60
37
0
6
56
1.25
7216032--7216127
9
10.2
9
68
16
52
40
2
4
53
1.32
7217241--7217591
193
1.8
193
94
0
630
37
15
10
36
1.82
7219068--7219130
23
2.7
23
92
0
99
23
25
19
31
1.98
7219357--7219403
3
15.7
3
100
0
94
68
0
0
31
0.90
7219537--7220651
45
23.9
45
85
7
1370
37
24
12
25
1.90
7219537--7220651
93
11.9
90
85
7
1360
37
24
12
25
1.90

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138