Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167949.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_21, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19848060

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   

This is table  22  of  138  ( 16447 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5890784--5890859
30
2.6
29
79
8
91
44
0
1
53
1.08
5890792--5890834
21
2.2
19
84
12
52
48
0
2
48
1.14
5891296--5891345
24
2.1
24
85
10
68
60
4
4
32
1.34
5891976--5892024
3
16.3
3
100
0
98
34
0
0
65
0.93
5894731--5894978
86
2.9
86
81
1
293
44
9
15
29
1.79
5904331--5904365
16
2.2
16
89
0
52
60
22
5
11
1.52
5907983--5908017
2
17.5
2
100
0
70
51
0
0
48
1.00
5911171--5911299
48
2.7
46
78
8
141
34
12
14
37
1.84
5913536--5913574
20
2.0
20
90
10
62
20
5
12
61
1.50
5913527--5913588
20
2.8
22
72
22
58
19
8
9
62
1.50
5913687--5913721
14
2.5
14
86
13
54
25
8
17
48
1.75
5914435--5914475
10
3.9
11
81
12
50
43
0
2
53
1.13
5914520--5914611
39
2.3
39
88
5
132
44
4
2
48
1.34
5919845--5920054
103
2.0
103
100
0
420
30
14
30
24
1.94
5921885--5921936
20
2.6
20
78
6
61
44
0
0
55
0.99
5928971--5929005
12
2.8
12
86
4
52
68
0
0
31
0.90
5929767--5929813
19
2.3
21
75
17
55
44
4
0
51
1.21
5933472--5933508
11
3.3
11
85
7
56
72
0
0
27
0.84
5940521--5940565
23
2.0
23
95
0
81
31
20
13
35
1.91
5945237--5945274
13
2.8
13
84
15
51
65
0
2
31
1.06
5945247--5945276
12
2.5
12
94
0
51
66
0
0
33
0.92
5945390--5945422
14
2.3
15
85
15
52
54
0
0
45
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5945377--5945446
37
1.9
36
85
8
97
51
2
0
45
1.16
5945492--5945543
7
7.4
7
86
6
70
23
0
3
73
1.00
5945492--5945546
14
4.0
14
90
6
78
21
0
3
74
0.97
5948328--5948360
17
2.0
16
94
5
57
24
0
6
69
1.10
5949368--5949578
114
1.9
113
82
3
271
36
11
15
36
1.84
5950118--5950150
12
2.7
13
81
18
52
78
0
6
15
0.93
5951287--5951325
20
1.9
21
89
5
62
74
0
7
17
1.05
5957290--5957352
31
2.0
31
100
0
126
52
9
9
28
1.65
5958178--5958215
2
20.5
2
84
15
55
0
47
0
52
1.00
5961939--5961963
2
12.5
2
100
0
50
52
0
0
48
1.00
5963914--5963956
17
2.5
18
85
7
63
88
4
6
0
0.63
5963922--5963955
18
1.9
18
94
5
61
88
2
8
0
0.62
5964521--5964547
14
1.9
14
100
0
54
88
0
11
0
0.50
5966541--5966586
22
2.0
24
84
16
62
73
6
10
8
1.23
5968493--5968527
6
5.8
6
90
9
54
85
0
14
0
0.59
5971328--5971374
22
2.1
22
100
0
94
36
10
12
40
1.78
5978134--5978191
20
2.9
20
73
16
57
24
3
1
70
1.12
5980031--5980177
59
2.5
56
85
6
186
40
8
14
35
1.78
5980038--5980177
57
2.4
59
87
2
194
42
9
15
33
1.78
5980737--5980782
14
3.0
15
78
21
51
21
6
8
63
1.46
5984061--5984107
13
3.9
12
79
15
53
80
0
14
4
0.85
5984062--5984139
23
3.3
23
76
13
63
75
0
17
6
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5985381--5985841
42
11.1
42
92
3
742
22
17
23
36
1.95
5985846--5985942
1
97.0
1
77
0
86
87
8
0
4
0.65
5985847--5985942
8
11.9
8
78
14
108
87
8
0
4
0.66
5985846--5985943
16
5.9
17
87
4
130
86
8
0
5
0.69
5985846--5985941
24
4.0
24
83
5
122
87
8
0
4
0.66
5986190--5986247
20
2.9
21
75
14
59
24
5
1
68
1.19
5987931--5987964
15
2.3
15
94
0
59
38
26
26
8
1.85
5988097--5988310
58
3.7
58
85
3
279
42
7
15
35
1.74
5988080--5988310
116
2.0
119
88
6
355
43
6
14
35
1.72
5992538--5992589
21
2.5
21
90
6
79
50
0
0
50
1.00
5992538--5992589
22
2.5
22
93
6
90
50
0
0
50
1.00
5992562--5992618
30
1.9
30
85
0
78
52
1
0
45
1.11
5993280--5993312
15
2.1
17
88
11
52
48
0
0
51
1.00
5993382--5993417
15
2.2
16
90
9
56
41
0
0
58
0.98
5995498--5995543
8
5.9
8
80
19
53
63
0
0
36
0.95
5995507--5995542
11
3.0
13
76
23
51
63
0
0
36
0.94
5995493--5995542
23
2.4
19
87
12
64
64
0
0
36
0.94
5996291--5996333
18
2.5
17
78
10
52
34
0
20
44
1.52
5999972--6000025
22
2.5
22
93
0
90
40
16
1
40
1.59
6000034--6000063
11
2.7
11
100
0
60
46
10
10
33
1.71
6007293--6007327
3
11.7
3
100
0
70
65
0
0
34
0.93
6007365--6007414
22
2.3
20
80
12
55
82
4
2
12
0.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6010191--6010417
59
3.9
58
84
2
267
37
11
4
47
1.60
6010364--6010448
43
2.0
43
84
6
111
34
12
3
49
1.58
6010379--6010462
43
1.9
43
85
9
116
32
13
4
50
1.62
6010321--6010507
104
1.8
101
86
7
270
35
13
4
47
1.62
6010422--6010570
58
2.5
59
91
4
246
34
13
6
44
1.70
6010635--6010682
4
12.5
4
86
8
64
72
0
0
27
0.84
6010635--6010682
15
3.1
15
84
3
60
72
0
0
27
0.84
6010893--6010937
16
2.9
15
78
15
56
0
42
0
57
0.98
6011524--6011667
4
34.5
4
66
20
64
63
2
2
31
1.23
6011525--6011750
7
30.9
7
70
22
73
66
2
2
27
1.18
6011514--6011600
21
3.9
22
78
14
88
62
2
5
29
1.31
6011524--6011667
22
6.4
23
75
20
85
63
2
2
31
1.23
6011647--6011757
18
5.7
18
75
18
82
73
2
1
21
1.05
6011647--6011757
7
17.0
6
80
14
82
73
2
1
21
1.05
6012496--6012545
23
2.2
23
85
0
64
46
2
4
48
1.32
6014311--6014353
22
2.0
22
90
9
70
55
4
2
37
1.33
6014291--6014390
50
1.9
51
82
10
121
60
3
1
36
1.19
6023607--6023701
29
3.2
29
85
4
120
47
4
4
44
1.42
6023569--6023701
58
2.3
58
78
12
130
43
3
3
49
1.35
6030392--6030510
56
2.1
56
77
0
130
24
32
13
29
1.93
6035828--6035862
2
17.5
2
93
0
61
45
0
0
54
0.99
6038904--6038950
24
2.0
24
82
0
58
82
14
2
0
0.75
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6040017--6040115
15
6.8
15
80
10
91
51
27
1
20
1.54
6040017--6040122
29
3.7
28
74
16
92
50
27
0
20
1.54
6040150--6040211
28
2.2
29
85
2
81
48
32
3
16
1.62
6046199--6046237
1
39.0
1
84
0
51
92
2
5
0
0.46
6046199--6046237
19
2.1
18
90
4
60
92
2
5
0
0.46
6046804--6046836
16
2.1
16
88
11
50
87
9
0
3
0.63
6046805--6046871
33
2.0
33
85
2
89
80
4
5
8
1.01
6046833--6046870
19
2.0
20
84
5
51
78
0
10
10
0.95
6048505--6048546
18
2.3
18
87
0
57
23
19
14
42
1.87
6048681--6049012
109
3.0
107
81
6
330
23
20
17
38
1.93
6048875--6048926
23
2.3
23
83
6
70
25
21
19
34
1.96
6048717--6049012
110
2.7
107
81
6
326
22
21
18
37
1.94
6048900--6049187
87
3.3
87
77
8
284
22
19
18
40
1.92
6049071--6049320
108
2.3
111
83
6
312
21
18
19
40
1.92
6049270--6049344
24
3.1
24
92
0
123
22
18
21
37
1.94
6049297--6049566
109
2.5
107
78
10
262
23
20
19
36
1.95
6049514--6049561
24
2.0
24
95
0
87
27
20
18
33
1.96
6049570--6049658
37
2.4
37
84
3
117
13
23
20
42
1.87
6049570--6049678
37
2.9
37
80
2
101
12
23
19
44
1.85
6051358--6051449
14
6.4
14
73
19
66
50
27
0
22
1.50
6056847--6057111
146
1.8
146
88
0
404
28
15
16
39
1.89
6056847--6057141
146
2.0
146
86
1
403
27
16
15
40
1.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6062193--6062241
2
24.5
2
87
8
64
44
4
0
51
1.20
6066763--6066801
18
2.2
18
95
0
69
33
15
2
48
1.58
6067957--6068037
43
1.9
42
82
7
101
75
6
7
11
1.19
6069002--6069044
16
2.8
16
93
6
72
9
0
9
81
0.88
6069088--6069188
6
16.7
6
72
10
62
63
7
1
26
1.33
6069711--6069759
17
2.9
17
81
0
71
34
20
16
28
1.94
6069790--6070060
17
16.2
17
67
15
91
39
11
12
36
1.79
6069945--6070037
18
5.3
18
72
5
82
46
8
11
33
1.71
6069890--6070058
35
4.9
35
79
6
157
42
10
11
35
1.75
6069928--6070058
70
1.9
70
86
0
190
43
9
11
35
1.73

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138