Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167949.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_21, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19848060

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   

This is table  48  of  138  ( 16447 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10300606--10300795
100
1.9
98
93
2
326
23
12
22
42
1.87
10300580--10300837
141
1.8
141
88
1
401
24
12
20
43
1.85
10300696--10300852
41
3.8
42
87
3
228
23
12
21
43
1.86
10300696--10300852
83
1.9
84
90
2
255
23
12
21
43
1.86
10300472--10300879
223
1.8
222
83
2
539
24
12
20
42
1.87
10301499--10301537
14
2.7
14
88
4
51
64
0
35
0
0.94
10301499--10301540
15
2.7
15
85
14
59
64
0
35
0
0.94
10302230--10302440
109
1.9
110
85
4
293
53
7
13
26
1.66
10302230--10302407
56
3.2
56
77
7
202
57
7
12
23
1.60
10302247--10302435
53
3.5
51
75
10
171
51
7
13
26
1.69
10312982--10313282
83
3.6
84
75
9
278
37
14
17
30
1.90
10312965--10313274
164
1.9
165
82
4
392
37
15
17
30
1.91
10314590--10314629
18
2.3
17
83
8
53
45
10
12
32
1.75
10315309--10315354
23
2.0
23
87
8
67
0
26
6
67
1.15
10320591--10320638
16
3.0
16
82
11
62
39
0
2
58
1.10
10322603--10322806
12
17.9
11
68
22
70
59
11
2
26
1.46
10322621--10322706
22
3.8
24
73
14
74
61
8
2
27
1.36
10322673--10322706
11
2.8
13
82
17
54
61
5
0
32
1.20
10322673--10322791
24
5.1
24
71
23
78
57
12
3
26
1.51
10322720--10322800
13
6.5
13
76
13
80
56
14
3
24
1.55
10322885--10323219
14
25.5
13
68
20
84
70
4
4
20
1.24
10323023--10323061
12
3.2
12
81
0
51
74
2
5
17
1.12
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10322934--10323076
68
2.1
70
80
15
156
71
3
4
20
1.18
10323111--10323273
21
7.6
21
67
15
77
74
6
3
15
1.16
10323145--10323249
28
3.7
28
78
16
110
73
6
4
15
1.21
10323023--10323249
14
16.1
13
69
15
89
72
5
4
17
1.22
10323237--10323297
10
5.7
10
73
19
52
81
3
3
11
0.92
10323224--10323297
17
4.8
15
79
14
71
81
2
4
12
0.94
10325434--10325481
15
3.2
15
85
5
62
39
0
0
60
0.97
10328251--10328277
13
2.1
13
100
0
54
55
22
14
7
1.64
10331579--10331668
6
15.3
6
78
7
87
14
0
17
67
1.23
10331579--10331669
30
3.1
29
88
3
128
14
0
17
68
1.22
10331582--10331650
23
3.0
23
84
2
84
15
0
17
66
1.25
10331674--10331731
25
2.3
25
79
5
64
25
3
6
63
1.35
10332797--10332923
6
20.7
6
82
5
112
14
1
20
63
1.38
10332797--10332889
36
2.6
36
87
0
141
15
0
22
62
1.32
10333007--10333043
18
2.1
18
90
5
58
18
5
13
62
1.50
10333121--10333210
24
3.7
23
74
15
67
30
4
11
54
1.55
10333171--10333210
13
2.9
14
81
7
55
32
7
12
47
1.69
10333226--10333596
183
2.0
183
100
0
742
28
8
18
45
1.77
10334012--10334057
20
2.3
20
96
3
85
23
4
4
67
1.27
10338888--10338952
16
4.1
15
75
19
53
81
1
12
4
0.91
10340577--10340616
10
3.5
11
84
15
55
85
0
0
15
0.61
10340578--10340624
9
5.1
9
78
14
51
87
0
2
10
0.63
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10340577--10340616
6
7.0
6
83
16
50
85
0
0
15
0.61
10340577--10340619
11
3.8
11
80
17
52
86
0
0
13
0.58
10340578--10340617
17
2.3
18
95
4
73
87
0
0
12
0.54
10340559--10340617
18
3.4
17
83
6
73
81
1
3
13
0.90
10341404--10341454
13
3.7
13
82
12
50
80
5
9
3
1.01
10341436--10341503
6
11.3
6
80
10
50
75
0
4
20
0.98
10341454--10341506
3
18.7
3
77
14
51
71
0
3
24
1.02
10341744--10342465
119
6.2
119
76
8
631
43
15
22
18
1.87
10342053--10342253
107
1.9
106
83
5
260
44
13
21
19
1.85
10341818--10342462
345
1.9
345
84
2
875
44
15
22
18
1.87
10350964--10351006
15
2.7
15
85
7
50
34
2
2
60
1.22
10354874--10354903
2
14.5
2
93
6
51
46
3
0
50
1.18
10356659--10356762
52
2.0
52
87
7
149
29
20
6
43
1.77
10357566--10357708
49
2.8
50
84
9
173
30
21
3
44
1.69
10358147--10358182
2
18.0
2
94
0
63
50
2
0
47
1.15
10359406--10359448
14
2.8
16
75
13
54
65
0
0
34
0.93
10360457--10360533
38
2.0
38
97
0
145
12
33
7
45
1.72
10363215--10363240
8
3.2
8
100
0
52
34
15
23
26
1.94
10365146--10365175
2
15.0
2
92
0
51
46
0
3
50
1.18
10365792--10365843
17
3.0
18
83
5
63
48
0
1
50
1.12
10365810--10365843
18
1.9
17
88
5
50
50
0
2
47
1.16
10367314--10367372
24
2.6
22
76
21
59
71
5
1
22
1.15
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10368174--10368237
3
21.3
3
96
0
119
65
0
1
32
1.02
10368333--10368375
17
2.6
16
85
10
52
53
6
0
39
1.28
10368333--10368366
18
2.0
16
88
11
50
55
5
0
38
1.24
10378212--10378240
14
2.0
15
93
6
51
68
0
17
13
1.20
10379358--10379392
6
5.8
6
86
0
52
11
2
2
82
0.88
10379620--10379666
19
2.6
18
83
9
60
72
4
2
21
1.12
10379654--10379701
19
2.4
21
76
16
57
77
2
4
16
1.03
10380457--10380491
3
11.7
3
100
0
70
65
0
0
34
0.93
10380606--10380646
5
7.8
5
84
10
55
56
2
0
41
1.13
10380591--10380717
13
10.5
12
67
16
59
53
8
1
36
1.41
10380607--10380727
17
7.1
17
69
19
65
52
9
0
37
1.39
10380635--10380710
21
3.6
20
75
20
75
51
11
1
35
1.47
10380565--10380728
22
7.3
23
71
18
91
53
9
3
34
1.48
10382724--10382748
2
12.5
2
100
0
50
52
0
0
48
1.00
10383511--10383540
13
2.2
13
94
5
51
73
0
0
26
0.84
10383511--10383540
7
4.4
7
91
8
53
73
0
0
26
0.84
10384180--10384213
16
2.1
16
88
0
50
38
8
14
38
1.78
10384191--10384256
32
2.1
32
82
0
78
45
10
10
33
1.73
10385128--10385231
48
2.2
45
83
11
122
60
4
20
14
1.52
10387824--10387860
18
2.1
18
100
0
74
51
16
16
16
1.77
10389108--10389156
22
2.2
22
92
0
80
24
30
4
40
1.74
10394291--10394358
34
2.0
34
82
8
84
10
14
8
66
1.45
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10394360--10394548
96
2.0
96
89
2
290
23
24
13
38
1.90
10394716--10394762
24
1.9
25
83
12
62
25
23
4
46
1.70
10404226--10404263
18
2.1
19
85
5
51
31
15
2
50
1.58
10406480--10406550
14
4.6
14
73
24
54
74
0
1
23
0.90
10406480--10406549
31
2.3
30
81
11
81
74
0
1
24
0.90
10406482--10406550
16
4.2
17
68
14
56
75
0
1
23
0.89
10406704--10406753
3
16.7
3
91
8
84
68
0
0
32
0.90
10409132--10409479
186
1.9
187
84
8
478
45
7
10
35
1.68
10414845--10414877
16
2.1
16
94
0
57
39
6
0
54
1.25
10433948--10434035
30
2.9
30
89
0
122
50
12
12
25
1.75
10435835--10435859
9
2.8
9
100
0
50
24
12
28
36
1.91
10439461--10439494
15
2.2
16
89
5
52
61
0
0
38
0.96
10440104--10440149
20
2.3
19
82
10
56
36
0
15
47
1.45
10450452--10450489
19
2.0
19
100
0
76
42
10
10
36
1.74
10458366--10458433
6
10.8
6
71
20
50
61
0
0
38
0.96
10458366--10458428
17
3.8
16
74
15
56
61
0
0
38
0.96
10458533--10458625
29
3.3
29
78
11
104
58
9
5
26
1.52
10458711--10458750
22
1.9
22
85
10
57
45
0
0
55
0.99
10458875--10458923
19
2.5
19
78
15
55
63
2
0
34
1.06
10461345--10461386
20
2.1
20
95
0
75
30
9
19
40
1.83
10461907--10461970
6
10.7
6
85
8
51
64
0
6
29
1.18
10461923--10461957
12
2.9
12
95
0
61
54
0
11
34
1.37
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10461921--10461961
18
2.3
18
86
0
64
58
0
9
31
1.31
10462004--10462068
23
2.8
23
81
6
69
49
1
16
32
1.56
10469086--10469120
14
2.5
14
86
13
54
74
8
11
5
1.22
10474129--10474188
8
7.4
8
75
17
52
85
3
6
5
0.84
10474129--10474191
9
6.6
9
77
16
56
84
3
7
4
0.87
10474134--10474204
34
2.1
34
82
5
92
81
4
8
5
0.97
10475133--10475358
50
4.6
51
79
11
219
36
14
11
38
1.81
10475246--10475510
44
5.9
44
75
10
207
34
12
11
41
1.79
10475298--10475510
88
2.4
88
83
7
254
33
12
12
42
1.79
10475675--10475740
14
4.4
14
73
14
60
81
15
0
3
0.80

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138