Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168270.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_5, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27802247

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   

This is table  115  of  147  ( 17591 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20730481--20730573
46
2.0
46
100
0
186
35
8
21
34
1.84
20735625--20735690
27
2.5
26
78
7
71
18
7
24
50
1.72
20735649--20735706
14
4.3
13
81
14
73
18
6
20
53
1.67
20735651--20735709
13
4.5
13
81
12
66
20
6
22
50
1.71
20735650--20735726
40
1.9
41
86
2
111
22
6
19
51
1.69
20735642--20735701
27
2.2
26
88
8
84
16
5
25
53
1.63
20735912--20735962
3
16.7
3
76
11
50
27
0
3
68
1.07
20735927--20735964
7
5.4
7
87
12
60
26
0
0
73
0.83
20735909--20735964
15
3.9
15
82
11
64
28
0
3
67
1.07
20737563--20737634
27
2.6
28
78
8
78
33
1
1
63
1.11
20737603--20737637
12
3.0
11
91
8
52
28
0
0
71
0.86
20738249--20738315
34
1.9
34
85
8
91
56
11
11
19
1.66
20738459--20738553
34
2.8
34
78
9
104
48
12
17
21
1.80
20738498--20738704
71
2.9
71
81
1
238
53
10
14
21
1.71
20738547--20738766
69
3.1
70
80
1
199
53
10
15
20
1.71
20740643--20741038
197
2.0
197
87
2
564
33
18
14
33
1.91
20747412--20747443
3
10.7
3
100
0
64
34
0
0
65
0.93
20752982--20753020
19
2.1
19
100
0
78
38
10
30
20
1.86
20757707--20757811
52
2.0
52
100
0
210
22
5
19
52
1.67
20759685--20759780
45
2.1
47
83
11
119
12
14
2
70
1.25
20766795--20766878
38
2.2
38
83
10
100
30
14
15
39
1.87
20768226--20768256
4
7.8
4
92
0
53
25
0
3
70
1.02
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20770763--20770791
12
2.3
13
94
5
51
75
6
0
17
1.01
20770785--20770815
6
5.2
6
100
0
62
67
0
0
32
0.91
20770773--20770816
18
2.5
17
85
10
61
70
2
0
27
0.99
20772661--20772692
3
10.7
3
100
0
64
0
0
31
68
0.90
20777090--20777127
17
2.1
19
85
9
53
10
7
15
65
1.45
20784229--20784499
42
6.6
41
84
3
310
36
21
14
26
1.93
20784229--20784499
83
3.3
82
84
3
346
36
21
14
26
1.93
20784229--20784469
125
1.9
123
86
5
342
36
21
15
26
1.93
20786221--20786317
32
3.0
32
80
6
97
8
19
0
72
1.10
20786230--20786276
24
2.0
23
83
4
58
4
23
0
72
1.02
20786250--20786317
33
2.0
34
88
2
102
8
19
0
72
1.11
20801350--20801401
26
2.0
26
96
0
95
44
19
17
19
1.87
20802406--20802528
13
9.5
13
78
3
113
51
22
10
15
1.74
20803073--20803131
31
1.9
31
85
0
82
49
1
8
40
1.43
20805661--20805860
111
1.8
111
84
2
276
36
11
5
47
1.62
20805680--20805894
111
1.9
111
83
4
272
33
11
5
49
1.62
20805659--20805909
111
2.3
110
76
9
258
35
11
4
48
1.60
20805793--20805979
73
2.6
73
80
9
206
35
9
5
49
1.59
20805918--20806499
301
1.9
301
99
0
1155
35
8
8
47
1.64
20809896--20810013
58
2.0
58
96
0
218
30
14
19
35
1.92
20814524--20814576
18
3.2
18
74
20
60
45
0
3
50
1.19
20814536--20814568
14
2.3
15
89
5
50
42
0
3
54
1.15
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20815812--20815852
17
2.4
17
84
15
50
46
2
4
46
1.37
20816261--20816286
8
3.2
8
100
0
52
53
0
0
46
1.00
20816426--20816452
14
1.9
14
100
0
54
51
0
3
44
1.19
20817023--20817081
2
31.0
2
78
10
61
50
3
1
44
1.28
20819459--20819538
40
2.0
41
82
2
99
50
1
2
46
1.23
20819474--20819550
41
1.9
40
84
7
102
51
1
0
46
1.09
20820267--20820329
2
33.0
2
79
9
69
50
3
1
44
1.27
20821297--20821322
2
13.0
2
100
0
52
50
0
0
50
1.00
20825648--20825697
3
16.7
3
100
0
100
68
0
0
32
0.90
20825699--20825729
3
10.3
3
100
0
62
35
0
0
64
0.94
20833761--20833801
21
1.9
22
85
5
57
46
12
31
9
1.74
20835113--20835363
19
13.8
19
72
9
150
44
13
14
27
1.83
20835113--20835363
110
2.3
107
82
6
308
44
13
14
27
1.83
20835550--20835611
22
2.9
21
76
7
61
38
11
9
40
1.74
20835534--20835707
44
3.9
44
79
3
125
41
12
9
37
1.74
20838017--20838111
30
3.2
30
67
5
93
44
12
4
38
1.62
20837974--20838111
60
2.3
59
91
2
215
42
12
5
40
1.64
20838096--20838125
14
2.1
14
100
0
60
26
20
6
46
1.75
20838036--20838183
72
2.0
74
88
2
219
39
14
5
40
1.69
20838228--20838285
5
10.8
5
85
10
71
79
0
3
17
0.87
20838315--20838349
3
11.7
3
87
0
52
68
2
2
25
1.17
20838315--20838349
12
2.9
12
95
0
61
68
2
2
25
1.17
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20839085--20839191
3
34.7
3
76
15
85
64
2
3
28
1.25
20839084--20839301
20
10.9
20
70
16
116
64
1
4
29
1.23
20839188--20839287
24
4.3
23
77
11
96
64
1
5
30
1.22
20839202--20839312
24
5.1
22
76
15
81
64
0
5
29
1.15
20839200--20839287
46
1.9
46
86
4
124
62
0
5
31
1.18
20840713--20841249
268
2.0
267
92
1
889
36
13
19
30
1.91
20849586--20849965
189
2.0
189
97
0
724
29
17
8
44
1.78
20856068--20856093
2
13.0
2
100
0
52
0
50
0
50
1.00
20857372--20857405
15
2.3
15
90
5
52
17
0
0
82
0.67
20858250--20858348
3
32.0
3
81
11
85
58
9
0
32
1.29
20862001--20862195
17
10.9
19
68
15
71
43
13
16
26
1.85
20862073--20862188
35
3.3
35
76
11
112
45
14
16
23
1.84
20862029--20862197
36
4.8
36
75
12
125
42
14
17
26
1.87
20862318--20862490
27
6.0
27
88
11
238
36
13
6
42
1.72
20862318--20862490
60
3.0
60
94
5
304
36
13
6
42
1.72
20862318--20862504
87
2.1
90
94
6
326
36
14
6
42
1.72
20862465--20862598
43
3.1
44
79
7
139
37
13
11
37
1.82
20862943--20862990
23
2.1
23
84
7
62
41
14
14
29
1.85
20863613--20863655
18
2.5
16
82
14
50
6
4
4
83
0.89
20866469--20866509
16
2.5
16
84
4
55
73
2
2
21
1.07
20871445--20871476
17
1.9
17
93
6
57
59
3
0
37
1.13
20871948--20871979
16
2.0
16
93
0
55
40
0
9
50
1.35
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20874898--20874938
21
2.0
21
100
0
82
31
0
34
34
1.58
20876262--20876302
20
2.0
20
100
0
82
39
9
4
46
1.58
20876394--20876426
13
2.7
12
90
9
57
33
3
6
57
1.38
20877715--20877763
20
2.4
20
80
10
55
77
10
10
2
1.07
20885530--20885584
21
2.6
21
100
0
110
14
29
29
27
1.95
20890430--20890485
25
2.2
25
81
9
60
41
7
5
46
1.54
20891302--20891343
8
5.1
8
91
2
66
11
2
2
83
0.84
20891456--20891598
42
3.4
42
82
3
162
40
17
15
26
1.89
20891575--20891614
16
2.5
16
91
0
71
35
25
17
22
1.95
20891535--20891656
58
2.1
58
92
0
199
39
21
15
23
1.92
20891593--20891925
41
8.0
41
78
6
323
45
18
13
22
1.84
20891593--20891925
84
4.0
83
79
6
354
45
18
13
22
1.84
20892335--20892381
21
2.2
21
84
0
67
44
12
6
36
1.68
20893507--20893613
16
6.9
17
73
17
74
9
14
0
76
1.01
20893518--20893615
9
11.4
9
79
16
102
9
12
0
78
0.96
20893533--20893616
15
4.9
17
81
11
84
9
10
0
79
0.93
20893533--20893615
10
8.4
10
78
15
75
8
10
0
80
0.90
20893578--20893625
24
2.0
24
83
0
60
14
10
0
75
1.06
20901052--20901108
27
2.1
28
83
3
71
85
0
10
3
0.70
20906795--20906842
10
5.0
10
82
10
55
43
0
0
56
0.99
20906672--20906916
133
1.8
133
97
0
463
44
4
4
46
1.46
20909745--20909791
19
2.5
19
83
13
62
63
0
4
31
1.13
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20909746--20909792
18
2.6
17
80
9
58
63
0
4
31
1.13
20909843--20909903
20
3.1
21
68
20
51
60
1
0
37
1.07
20913804--20913839
3
12.0
3
100
0
72
33
0
0
66
0.92
20914553--20914596
17
2.6
17
85
0
61
68
2
4
25
1.20
20914720--20914745
8
3.2
8
100
0
52
11
0
0
88
0.52
20917621--20917650
14
2.2
13
94
5
51
66
0
26
6
1.16
20917644--20917684
8
4.9
8
85
8
55
85
0
14
0
0.60
20917642--20917684
12
3.4
13
81
12
54
83
0
16
0
0.64
20917686--20917734
3
16.3
3
100
0
98
67
0
0
32
0.91
20917892--20918023
44
3.0
44
77
1
158
41
14
12
31
1.83

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147