Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168270.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_5, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27802247

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   

This is table  14  of  147  ( 17591 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3069903--3069934
3
10.7
3
93
0
55
31
3
0
65
1.08
3070337--3070379
22
2.0
22
90
4
70
25
4
9
60
1.47
3073822--3073859
3
12.7
3
94
0
67
28
0
2
68
1.03
3081536--3081580
13
3.5
12
88
11
63
6
0
17
75
1.01
3081531--3081583
20
2.8
19
81
13
56
7
0
15
77
0.98
3081536--3081583
7
7.3
7
76
19
50
8
0
16
75
1.04
3081531--3081592
31
2.0
30
84
12
81
9
0
14
75
1.03
3081580--3081626
17
2.9
17
84
6
53
23
0
2
74
0.93
3081988--3082562
73
7.9
73
84
3
721
44
13
21
20
1.86
3081988--3082562
146
4.0
146
88
2
807
44
13
21
20
1.86
3083590--3083622
16
2.1
16
94
0
57
6
21
0
72
1.05
3083602--3083657
9
6.7
9
88
11
84
8
17
0
73
1.08
3083598--3083677
9
9.1
9
81
10
76
12
13
0
73
1.09
3083740--3083774
18
1.9
18
100
0
70
34
17
17
31
1.93
3089484--3089523
18
2.2
19
90
4
64
17
12
12
57
1.65
3095229--3095287
20
3.0
20
92
0
91
16
30
30
22
1.96
3095579--3095612
11
2.9
12
86
8
52
20
0
0
79
0.73
3095930--3096002
31
2.4
31
88
4
103
21
24
24
28
1.99
3096067--3096108
19
2.2
19
91
0
66
26
30
23
19
1.98
3096327--3096369
5
8.6
5
85
10
61
20
44
34
0
1.52
3096382--3096447
17
3.8
17
76
6
60
12
4
7
75
1.16
3096446--3097202
156
4.8
159
97
1
1366
29
14
17
38
1.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3100421--3100445
1
25.0
1
100
0
50
100
0
0
0
0.00
3100831--3100869
16
2.4
16
82
0
60
74
0
17
7
1.05
3102060--3102389
42
8.0
42
90
3
458
23
17
22
36
1.95
3102060--3102389
83
4.0
83
88
5
483
23
17
22
36
1.95
3102080--3102389
125
2.5
125
91
2
507
24
17
23
34
1.96
3102522--3102559
20
1.9
20
94
0
67
18
31
28
21
1.97
3102852--3102885
11
2.9
12
86
8
52
20
0
0
79
0.73
3103202--3103274
31
2.4
31
90
4
112
21
26
24
27
2.00
3103339--3103380
19
2.2
19
91
0
66
26
30
23
19
1.98
3103593--3103647
15
3.7
15
80
0
65
21
47
27
3
1.68
3103603--3103642
5
8.0
5
83
10
55
22
42
35
0
1.54
3103657--3103712
15
3.5
15
79
11
58
10
3
8
76
1.12
3103651--3103684
10
3.3
10
88
8
50
5
0
2
91
0.51
3103696--3104151
156
2.9
159
94
1
783
28
14
17
39
1.89
3109346--3109408
22
2.8
21
76
11
63
25
3
1
69
1.12
3109328--3109469
51
2.9
49
78
13
123
26
2
3
66
1.21
3109347--3109481
57
2.3
60
76
14
138
29
2
2
65
1.16
3109444--3109562
22
5.7
21
76
13
102
27
5
1
65
1.23
3109446--3109562
20
5.6
20
78
8
117
27
5
1
65
1.23
3109363--3109501
4
32.8
4
66
21
52
28
2
2
66
1.18
3109446--3109562
42
2.8
40
84
7
135
27
5
1
65
1.23
3110326--3110358
8
4.2
8
88
3
50
9
3
0
87
0.63
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3110326--3110358
17
2.0
17
88
5
50
9
3
0
87
0.63
3110408--3110461
5
9.8
6
80
15
64
14
1
0
83
0.73
3110408--3110461
16
3.3
16
87
7
74
14
1
0
83
0.73
3110409--3110461
22
2.5
22
88
11
83
15
1
0
83
0.74
3120898--3120957
19
3.3
18
82
17
79
78
0
11
10
0.97
3120926--3120971
19
2.5
19
85
3
58
78
0
13
8
0.97
3121939--3122162
47
5.1
42
78
13
177
26
13
19
41
1.88
3121938--3122162
46
5.0
47
77
13
242
26
13
19
40
1.88
3121933--3122162
93
2.6
85
83
10
261
26
13
19
40
1.89
3122381--3122554
6
27.8
6
66
22
67
29
2
1
66
1.14
3122378--3122527
31
4.7
32
75
18
125
29
2
1
67
1.10
3122391--3122564
4
42.2
4
67
22
78
28
2
1
66
1.16
3122400--3122534
42
3.4
42
75
20
114
30
2
0
66
1.09
3122436--3122507
10
7.9
10
76
18
61
31
1
0
66
1.00
3122402--3122561
22
7.2
22
67
19
75
30
3
1
65
1.16
3123430--3123460
16
2.0
15
93
6
53
32
0
0
67
0.91
3123476--3123528
5
9.8
5
80
15
61
16
3
0
79
0.88
3123475--3123528
6
9.7
6
80
11
62
16
3
0
79
0.87
3123475--3123528
11
4.9
11
88
6
83
16
3
0
79
0.87
3123545--3123756
115
1.8
116
87
8
317
43
5
12
38
1.66
3123545--3123756
57
3.7
57
88
8
297
43
5
12
38
1.66
3129414--3129769
119
3.0
119
84
1
428
18
21
15
44
1.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3129970--3130004
3
11.7
3
93
0
61
28
0
2
68
1.04
3130323--3130359
19
2.0
20
84
10
51
18
5
40
35
1.74
3130776--3130822
5
9.8
5
81
9
53
17
2
4
76
1.04
3136078--3136108
12
2.6
12
94
0
53
48
0
0
51
1.00
3137842--3137889
21
2.3
21
85
0
60
33
31
20
14
1.93
3152853--3152898
23
2.0
23
86
4
65
56
0
2
41
1.11
3155064--3155101
2
19.5
2
89
5
60
52
0
0
47
1.00
3156736--3156789
5
10.6
5
90
6
56
16
0
5
77
0.94
3156735--3156819
11
7.9
11
74
9
52
18
4
3
72
1.16
3160477--3160525
13
3.6
13
78
10
53
36
6
2
55
1.37
3168138--3168188
20
2.8
17
78
16
66
47
1
3
47
1.32
3174259--3174300
10
4.3
10
81
6
50
16
0
7
76
1.00
3174244--3174291
19
2.5
20
82
3
53
12
2
6
79
1.01
3194011--3194063
12
4.4
12
74
9
54
52
0
3
43
1.19
3196311--3196347
2
18.5
2
94
0
65
45
0
2
51
1.15
3197413--3197453
21
2.0
21
85
0
55
63
0
0
36
0.95
3198519--3198704
44
4.3
43
75
9
146
42
16
9
31
1.81
3198607--3198702
43
2.2
44
87
3
133
44
16
8
30
1.77
3198669--3199165
103
4.9
102
77
10
457
41
17
8
31
1.80
3198668--3199211
50
10.7
50
75
9
336
42
17
9
30
1.81
3198679--3199211
257
2.1
252
79
6
558
42
17
9
30
1.81
3212351--3212804
50
8.9
50
76
9
328
31
12
15
39
1.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3212379--3212772
208
1.9
202
80
9
458
32
13
15
38
1.86
3212351--3212804
101
4.4
101
79
10
431
31
12
15
39
1.86
3214165--3214205
21
2.0
21
85
0
55
36
0
0
63
0.95
3215223--3215268
18
2.6
18
77
16
51
47
0
0
52
1.00
3217287--3217337
23
2.1
25
85
7
70
21
3
5
68
1.27
3223174--3223263
3
30.3
3
88
2
128
28
1
1
68
1.03
3223703--3223751
23
2.1
23
88
0
71
16
2
10
71
1.22
3226170--3226194
9
2.8
9
100
0
50
68
8
0
24
1.16
3227510--3228082
47
11.9
48
80
5
547
39
20
11
28
1.87
3227534--3228082
143
3.8
142
82
6
599
39
20
11
28
1.87
3227578--3228082
190
2.6
191
85
6
646
38
21
11
28
1.88
3239650--3239922
116
2.3
115
87
7
383
38
12
5
44
1.65
3239650--3239922
58
4.7
57
81
8
320
38
12
5
44
1.65
3239651--3239924
59
4.7
58
81
7
315
37
12
5
44
1.65
3239941--3240041
5
19.6
5
71
18
66
76
1
5
15
1.07
3239940--3240027
23
3.7
22
77
18
79
78
1
5
14
0.99
3239940--3240021
32
2.6
30
78
14
78
78
1
6
14
1.01
3239940--3240027
6
14.7
6
72
17
67
78
1
5
14
0.99
3239940--3240027
13
7.3
12
70
17
67
78
1
5
14
0.99
3239990--3240028
17
2.3
17
90
0
69
79
0
5
15
0.90
3240580--3241080
251
2.0
251
99
0
993
29
20
8
41
1.82
3241149--3241203
21
2.5
22
82
8
76
72
7
10
9
1.27
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3241211--3241294
21
3.9
21
76
9
80
67
2
3
26
1.19
3241258--3241305
17
2.9
16
81
6
53
68
2
0
29
1.01
3241413--3241464
18
2.9
18
79
0
59
78
3
5
11
1.05
3241658--3241788
42
3.1
42
82
5
115
38
21
17
22
1.93
3241658--3241826
40
4.1
41
83
4
169
39
21
16
22
1.92
3241683--3241863
40
4.3
41
82
5
184
39
21
16
23
1.92
3242158--3242238
43
1.9
42
90
7
128
35
16
12
35
1.86
3243563--3243621
10
5.8
10
75
16
50
6
13
0
79
0.92
3243573--3243634
23
2.8
21
73
22
63
8
16
0
75
1.02
3243581--3243631
24
2.1
24
85
7
68
5
15
0
78
0.93

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147