Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168270.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_5, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27802247

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   

This is table  32  of  147  ( 17591 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6767673--6767734
24
2.6
24
80
14
74
33
0
3
62
1.11
6767713--6767746
16
2.2
16
89
5
52
29
2
0
67
1.05
6768097--6768164
35
1.9
35
84
0
91
17
14
17
50
1.79
6768104--6768186
35
2.4
35
85
6
114
13
16
16
53
1.74
6769462--6769491
15
2.1
14
93
6
51
20
0
3
76
0.92
6769878--6769940
20
3.2
19
70
12
56
52
3
0
44
1.17
6771610--6771644
17
2.1
17
88
0
52
17
0
5
77
0.96
6774759--6774784
2
13.0
2
100
0
52
50
0
0
50
1.00
6775385--6775472
43
2.0
46
82
10
112
34
27
11
27
1.91
6776665--6776709
22
2.0
22
87
8
65
55
11
6
26
1.59
6785372--6785433
24
2.6
24
80
14
74
33
0
3
62
1.11
6785412--6785445
16
2.2
16
89
5
52
29
2
0
67
1.05
6785806--6785888
35
2.4
35
83
6
105
14
16
15
53
1.74
6787178--6787207
15
2.1
14
93
6
51
20
0
3
76
0.92
6787613--6787675
20
3.2
19
70
12
56
52
3
0
44
1.17
6787862--6787901
20
2.0
20
95
0
71
42
0
2
55
1.13
6789376--6789410
17
2.1
17
88
0
52
17
0
5
77
0.96
6793196--6793289
44
2.2
44
88
1
136
40
25
10
23
1.87
6794489--6794533
22
2.0
22
87
8
65
55
11
6
26
1.59
6802180--6802226
14
3.1
15
80
14
53
29
0
21
48
1.50
6814974--6815123
74
2.0
73
98
1
291
30
16
10
42
1.82
6820816--6820844
15
1.9
15
100
0
58
13
27
6
51
1.66
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6821512--6821565
22
2.3
24
81
15
69
57
0
1
40
1.09
6821807--6821834
2
14.0
2
100
0
56
50
0
0
50
1.00
6823389--6823466
39
2.0
39
89
0
120
34
6
20
38
1.78
6824896--6824928
16
2.1
16
94
0
57
12
9
36
42
1.74
6827261--6827290
15
2.0
15
93
0
51
63
0
0
36
0.95
6827263--6827305
19
2.2
20
87
4
61
55
0
2
41
1.12
6835442--6835511
12
6.2
11
70
17
54
48
0
4
47
1.21
6835432--6835476
22
2.0
23
86
4
65
51
0
2
46
1.13
6836046--6836089
22
2.0
22
86
8
63
50
2
0
47
1.13
6838950--6839058
26
4.2
24
78
12
92
45
0
0
52
1.13
6838984--6839063
25
3.2
25
75
16
69
50
1
1
47
1.17
6839496--6839524
12
2.3
13
94
5
51
82
17
0
0
0.66
6842202--6842233
14
2.2
15
94
5
57
21
0
3
75
0.95
6849399--6849479
41
2.0
41
90
4
128
38
13
9
38
1.78
6849948--6850000
22
2.5
22
96
3
99
52
0
0
47
1.00
6851279--6851321
19
2.3
19
88
8
61
41
0
0
58
0.98
6852344--6852377
16
2.1
16
88
0
50
47
11
8
32
1.71
6858543--6858576
16
2.1
16
100
0
68
38
20
17
23
1.93
6859546--6859619
31
2.3
33
81
9
91
50
2
1
45
1.24
6860090--6860162
30
2.5
30
84
4
87
13
9
10
65
1.46
6860740--6860771
16
1.9
17
93
6
57
46
6
0
46
1.27
6860744--6860797
28
2.0
27
82
17
67
48
3
0
48
1.19
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6860992--6861044
23
2.3
23
77
6
54
9
16
9
64
1.49
6861391--6861434
22
2.0
22
91
8
72
22
22
4
50
1.67
6867219--6867250
13
2.4
14
85
15
50
34
0
0
65
0.93
6871785--6871810
10
2.6
10
100
0
52
50
0
0
50
1.00
6884013--6884070
25
2.6
20
73
23
53
46
0
3
50
1.18
6884151--6884193
18
2.6
16
81
7
50
55
4
2
37
1.33
6884554--6884590
19
1.9
19
88
0
56
54
13
0
32
1.40
6888641--6888669
12
2.3
13
94
5
51
82
6
0
10
0.83
6888680--6888744
10
6.9
9
77
14
51
44
6
1
47
1.37
6888688--6888739
19
2.7
20
79
11
63
50
7
1
40
1.42
6889110--6889180
25
2.8
25
79
14
74
33
4
1
60
1.25
6889167--6889317
10
14.6
10
69
16
67
41
2
5
49
1.41
6889209--6889317
21
5.2
20
72
6
74
42
2
5
49
1.40
6890633--6890678
10
4.3
11
81
13
51
41
0
0
58
0.98
6890632--6890665
11
2.9
12
86
8
52
38
0
0
61
0.96
6890623--6890678
23
2.5
23
80
8
62
42
1
0
55
1.10
6891349--6891388
20
2.0
21
90
5
64
25
5
2
67
1.23
6906838--6906878
20
2.0
20
85
4
55
75
2
19
2
1.03
6913894--6913957
25
2.6
25
78
9
71
42
1
1
54
1.19
6913973--6914028
13
4.1
13
73
17
51
37
1
0
60
1.07
6915414--6915441
2
14.0
2
100
0
56
50
0
0
50
1.00
6925061--6925144
41
2.0
41
93
0
141
32
11
14
41
1.82
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6932332--6932403
7
8.9
8
76
14
51
80
1
11
6
0.96
6932329--6932411
10
8.7
10
76
10
75
77
1
12
9
1.06
6932341--6932382
18
2.3
18
88
8
59
73
0
14
11
1.09
6933427--6933636
41
5.1
41
91
2
305
24
16
23
35
1.95
6933427--6933615
81
2.3
82
91
3
308
24
16
22
36
1.94
6933645--6933713
1
69.0
1
79
0
75
89
8
0
1
0.53
6933645--6933710
21
3.3
21
87
10
86
89
9
0
1
0.55
6933645--6933705
10
6.3
10
85
12
83
90
8
0
1
0.53
6933946--6933990
19
2.4
19
88
7
65
28
0
0
71
0.87
6933945--6933987
11
3.7
12
85
14
63
30
0
0
69
0.88
6935022--6935096
17
4.1
18
70
18
57
12
6
1
80
0.97
6935040--6935107
10
6.4
10
76
17
50
10
5
1
82
0.90
6935020--6935107
18
5.0
17
72
15
63
12
6
1
79
0.98
6935076--6935106
16
1.9
16
93
0
53
9
3
0
87
0.66
6935113--6935779
59
11.0
59
78
10
598
45
7
14
32
1.73
6935213--6935779
183
3.1
174
84
7
697
44
8
14
32
1.76
6935125--6935779
245
2.7
240
86
5
861
45
7
14
32
1.74
6935125--6935779
122
5.4
120
82
8
722
45
7
14
32
1.74
6936637--6936772
66
2.1
66
82
10
163
50
6
11
32
1.64
6938029--6938079
26
2.0
26
84
0
66
54
1
1
41
1.22
6938053--6938091
10
3.9
10
82
0
51
53
0
2
43
1.14
6938065--6938125
27
2.3
27
83
13
90
55
0
3
40
1.16
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6938057--6938158
33
3.0
33
80
5
107
54
0
3
41
1.19
6938071--6938186
59
2.0
58
81
11
139
53
1
3
41
1.28
6938171--6938214
18
2.4
18
81
7
54
75
6
0
18
1.02
6938174--6938235
17
3.6
17
74
6
54
66
6
0
27
1.16
6938455--6938495
19
2.1
20
90
4
66
65
4
2
26
1.25
6938716--6938749
15
2.3
15
90
5
52
35
0
2
61
1.11
6938736--6938777
20
2.2
19
87
8
59
35
0
4
59
1.19
6939709--6939851
75
1.9
76
79
4
164
41
7
20
30
1.81
6939878--6939917
13
3.0
13
92
3
62
57
15
10
17
1.64
6942970--6943008
17
2.2
17
86
13
53
69
2
0
28
1.02
6944171--6944215
18
2.4
18
89
10
65
62
0
2
35
1.08
6946865--6946903
20
1.9
21
84
5
53
58
0
7
33
1.26
6947080--6947136
27
2.2
26
84
9
71
36
5
0
57
1.21
6948574--6948664
29
3.0
29
73
14
76
41
1
6
50
1.35
6954100--6954125
2
13.0
2
100
0
52
50
0
0
50
1.00
6954881--6954941
23
2.5
26
82
15
76
68
1
1
27
1.08
6954884--6954941
26
2.5
23
83
13
66
68
1
1
27
1.08
6960168--6960210
16
2.9
14
89
10
59
51
0
0
48
1.00
6964610--6964644
2
17.5
2
100
0
70
51
0
0
48
1.00
6964644--6964678
2
17.5
2
100
0
70
51
0
48
0
1.00
6974875--6974931
22
2.7
21
80
19
66
49
0
0
50
1.00
6975372--6975744
190
2.0
189
88
0
550
40
5
7
46
1.56
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6977130--6977174
21
2.1
21
84
8
56
46
4
2
46
1.35
6977931--6977956
2
13.0
2
100
0
52
50
0
0
50
1.00
6983822--6983851
11
2.7
11
94
0
51
33
3
10
53
1.51
6993876--6993904
13
2.2
13
100
0
58
27
37
13
20
1.91
6996429--6996462
2
17.0
2
100
0
68
50
0
0
50
1.00
6997332--6997382
21
2.4
22
86
6
77
64
0
3
31
1.11
6997699--6997745
23
2.0
23
91
0
76
38
4
17
40
1.69
7001730--7001794
21
3.0
20
82
13
67
66
12
1
20
1.32
7001734--7001795
10
5.5
11
74
16
56
64
12
1
20
1.36
7001815--7001859
21
2.1
21
87
0
63
57
11
4
26
1.52

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147