Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168270.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_5, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27802247

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   

This is table  132  of  147  ( 17591 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23867702--23867750
22
2.3
20
80
19
55
26
2
4
67
1.19
23868899--23869049
67
2.3
67
85
0
194
45
15
9
29
1.78
23869172--23869228
16
3.5
17
85
9
82
38
8
12
40
1.74
23869572--23869609
20
1.9
20
88
0
58
28
15
13
42
1.85
23869651--23869698
21
2.3
21
85
0
60
45
18
4
31
1.68
23869702--23869746
14
3.5
14
74
22
53
40
4
4
51
1.42
23869691--23869747
24
2.3
24
84
3
69
47
3
3
45
1.37
23869703--23869757
24
2.3
24
93
0
92
38
7
5
49
1.54
23871013--23871062
19
2.7
18
84
9
57
14
14
2
70
1.27
23871039--23871113
18
4.2
18
73
21
59
10
17
1
70
1.22
23871048--23871124
35
2.2
35
83
6
93
10
16
0
72
1.11
23871048--23871125
36
2.2
36
84
9
97
10
16
0
73
1.10
23883836--23883865
15
2.0
15
93
0
51
76
0
0
23
0.78
23884193--23884234
16
2.8
16
89
7
61
78
0
0
21
0.75
23884185--23884250
27
2.4
27
87
2
87
72
3
0
24
0.98
23886570--23886616
9
5.2
9
84
0
58
10
17
70
2
1.26
23893338--23893419
34
2.5
33
84
4
101
30
4
20
43
1.73
23894284--23894325
21
2.0
21
85
0
57
35
19
11
33
1.88
23895064--23895119
27
2.0
28
96
3
105
44
10
7
37
1.67
23896085--23896125
20
2.0
20
85
0
55
65
0
4
29
1.13
23898813--23898846
15
2.3
15
89
0
50
20
23
2
52
1.60
23899135--23899234
17
5.8
17
82
9
112
26
22
17
35
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23899139--23899237
34
2.8
35
93
3
164
25
22
18
34
1.96
23899730--23899860
65
2.0
66
81
10
153
33
12
16
37
1.87
23899647--23900074
190
2.3
188
84
2
545
36
12
13
37
1.81
23899960--23900228
127
2.1
129
84
6
352
31
10
15
41
1.82
23899960--23900228
62
4.2
63
77
16
234
31
10
15
41
1.82
23903720--23903792
37
2.0
37
83
0
92
35
1
23
39
1.63
23907130--23907184
27
2.0
28
82
10
69
54
3
0
41
1.18
23907934--23907987
28
2.0
26
82
7
63
61
3
1
33
1.25
23908047--23908124
32
2.5
32
87
4
106
50
16
3
29
1.63
23908756--23908803
24
2.0
25
83
4
62
39
2
2
56
1.23
23909859--23910297
127
3.5
124
79
7
402
35
13
12
38
1.82
23909859--23910363
64
7.9
63
76
8
364
36
13
11
38
1.81
23909888--23910362
127
3.7
129
78
9
361
36
13
11
37
1.81
23910879--23910999
57
2.3
51
81
16
165
48
5
9
35
1.60
23910893--23911008
57
2.0
57
100
0
232
43
6
10
39
1.66
23911756--23911797
14
3.2
13
78
21
52
64
0
0
35
0.94
23913758--23913815
22
2.7
22
78
2
64
53
8
27
10
1.64
23912867--23914127
656
1.9
658
88
1
1888
39
13
19
27
1.89
23914248--23914303
20
2.8
20
67
2
51
41
7
8
42
1.63
23916129--23916212
41
2.0
41
97
0
159
38
2
20
39
1.65
23925246--23925277
16
2.0
16
93
0
55
21
0
3
75
0.95
23925242--23925287
22
2.0
23
87
4
67
21
0
4
73
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23925728--23925799
30
2.4
30
81
9
76
59
5
5
29
1.43
23929638--23929663
4
6.5
4
100
0
52
76
0
0
23
0.78
23931429--23931568
8
17.5
8
63
19
51
22
2
25
49
1.64
23931454--23931537
24
3.5
24
73
11
64
20
2
25
52
1.58
23931477--23931588
16
6.9
16
74
6
82
24
2
26
46
1.66
23931476--23931539
25
2.6
25
80
7
78
21
1
28
48
1.59
23931506--23931590
31
2.6
31
80
7
89
24
2
27
45
1.65
23931995--23932073
6
12.5
6
71
17
54
18
6
1
73
1.11
23932138--23932167
3
10.0
3
92
0
51
63
0
3
33
1.11
23945820--23945853
16
2.1
17
89
10
54
20
0
5
73
1.04
23948300--23948354
28
2.0
28
92
0
92
21
18
14
45
1.85
23963358--23963597
121
2.0
121
97
0
453
31
9
31
27
1.88
23964265--23964325
26
2.4
25
81
8
68
50
1
1
45
1.21
23964323--23964395
17
3.9
19
68
16
55
54
0
1
43
1.08
23964308--23964400
18
5.3
18
75
16
72
52
1
1
45
1.15
23977411--23977452
16
2.6
16
78
10
50
30
0
9
59
1.29
23977426--23977470
21
2.1
21
88
8
65
28
0
8
62
1.25
23977521--23977559
15
2.6
15
88
8
53
15
0
2
82
0.79
23977515--23977559
21
2.1
21
84
8
56
13
0
4
82
0.82
23977629--23977723
25
3.8
25
69
21
74
69
3
6
21
1.25
23977685--23977724
18
2.2
18
86
8
55
75
0
7
17
1.03
23978559--23978679
3
42.3
3
70
23
66
57
4
0
37
1.26
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23978575--23978676
38
2.7
38
83
7
109
55
4
0
38
1.28
23978563--23978654
5
17.6
5
77
15
80
56
4
0
39
1.19
23981397--23981462
23
2.7
23
83
6
69
68
3
1
27
1.13
23981413--23981480
22
3.0
22
81
10
68
67
5
0
26
1.13
23981458--23981482
9
2.8
9
100
0
50
60
8
0
32
1.26
23981622--23981650
10
2.7
11
94
5
51
20
0
0
79
0.74
23981643--23981721
26
3.1
24
75
17
79
36
2
3
56
1.31
23981708--23981764
27
2.1
27
83
6
71
33
3
5
57
1.38
23981848--23981891
8
5.4
8
83
5
52
13
6
0
79
0.92
23981848--23981899
17
3.1
16
81
8
59
15
5
1
76
1.05
23981887--23981928
18
2.2
20
91
8
70
30
0
4
64
1.14
23982023--23982099
38
2.0
38
89
0
118
38
16
3
40
1.67
23983695--23983735
22
1.9
21
85
5
55
48
0
0
51
1.00
23984163--23984210
25
1.9
26
87
8
73
43
6
6
43
1.54
23984817--23984860
13
3.2
13
93
6
70
59
0
0
40
0.98
23984808--23984907
51
2.0
51
83
15
127
57
0
0
43
0.99
23999828--23999870
22
2.0
22
95
0
77
46
11
6
34
1.67
24007604--24007634
15
2.1
15
93
0
53
35
22
9
32
1.87
24010994--24011132
71
2.0
71
94
0
242
41
21
10
26
1.85
24016643--24016680
17
2.2
18
85
4
51
28
0
0
71
0.87
24018228--24018257
9
3.4
9
95
4
53
60
0
0
40
0.97
24023999--24024042
24
1.9
22
100
0
70
13
11
13
61
1.57
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24025033--24025072
21
1.9
21
85
10
55
62
10
5
22
1.46
24026011--24026056
2
24.5
2
82
12
62
47
2
0
50
1.13
24026011--24026056
11
3.9
11
91
5
65
47
2
0
50
1.13
24026011--24026056
17
2.8
17
90
3
67
47
2
0
50
1.13
24032042--24032070
13
2.2
13
100
0
58
0
6
0
93
0.36
24034836--24034876
2
20.5
2
100
0
82
48
0
0
51
1.00
24034895--24034945
27
1.9
26
84
4
66
49
1
3
45
1.32
24035485--24035522
19
2.0
19
89
0
58
44
0
2
52
1.14
24035662--24035694
2
16.5
2
100
0
66
51
0
0
48
1.00
24036846--24036870
2
12.5
2
100
0
50
52
0
0
48
1.00
24036910--24036948
10
3.7
10
86
10
51
51
2
5
41
1.38
24036928--24037013
39
2.2
38
84
8
120
39
9
5
45
1.60
24042850--24042883
16
2.1
16
89
10
52
44
2
2
50
1.32
24043208--24043283
10
7.9
10
73
8
59
53
3
1
40
1.27
24043206--24043283
18
4.2
18
75
12
68
55
3
1
39
1.26
24043239--24043282
20
2.2
20
91
4
70
63
6
0
29
1.20
24043239--24043273
11
3.3
11
88
8
54
65
5
0
28
1.15
24044740--24044779
21
1.9
21
85
10
55
62
10
5
22
1.46
24045705--24045744
2
21.0
2
85
10
57
47
2
0
50
1.14
24045705--24045744
21
1.9
21
89
0
62
47
2
0
50
1.14
24054867--24054900
13
2.6
13
86
13
52
47
0
0
52
1.00
24055029--24055061
2
17.0
2
87
6
50
51
3
0
45
1.16
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24055097--24055149
25
2.1
26
86
10
74
43
0
1
54
1.11
24056510--24056623
39
2.9
39
92
1
176
34
10
5
50
1.59
24062790--24062837
20
2.3
21
86
10
64
47
2
0
50
1.12
24062788--24062830
20
2.2
20
91
4
70
48
0
0
51
1.00
24062801--24062945
10
15.1
9
67
23
57
58
4
0
35
1.24
24062833--24062866
16
2.1
16
88
5
50
67
2
0
29
1.05
24062820--24062943
40
3.2
36
74
15
115
59
5
0
33
1.26
24062874--24062969
19
5.3
18
76
13
72
64
5
0
30
1.15
24062900--24062944
21
2.1
21
87
0
63
62
8
0
28
1.25
24062874--24062974
18
5.6
18
72
14
66
63
4
0
31
1.16

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147