Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168270.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_5, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27802247

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   

This is table  141  of  147  ( 17591 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26016141--26016345
111
1.8
112
91
1
340
35
21
12
30
1.90
26017517--26017541
3
8.3
3
100
0
50
68
32
0
0
0.90
26018070--26018108
19
2.0
20
85
5
53
38
2
2
56
1.27
26018180--26018209
11
2.6
11
94
5
51
40
0
0
60
0.97
26018806--26018859
27
2.0
27
100
0
108
33
29
11
25
1.91
26022369--26022423
12
4.2
12
74
17
56
52
0
0
47
1.00
26023057--26023130
34
2.2
34
100
0
148
47
8
8
36
1.63
26023392--26023424
18
1.9
17
88
11
50
42
0
0
57
0.98
26028431--26028461
3
10.3
3
100
0
62
67
0
0
32
0.91
26031009--26031108
50
2.0
50
98
0
191
45
10
10
35
1.71
26033282--26033308
4
6.8
4
100
0
54
0
0
25
74
0.83
26033435--26033546
39
3.0
37
76
11
102
64
0
0
33
1.06
26036159--26036315
71
2.2
71
80
6
167
40
7
6
45
1.58
26038335--26038360
7
3.7
7
100
0
52
76
0
23
0
0.78
26039678--26039781
35
3.1
34
77
2
102
48
3
6
41
1.48
26039675--26039810
33
4.0
33
75
4
119
50
5
5
38
1.49
26040085--26040140
24
2.4
23
85
5
69
48
3
0
48
1.19
26066979--26067009
7
4.4
7
100
0
62
29
12
12
45
1.80
26067051--26067094
19
2.4
19
88
3
63
27
0
4
68
1.09
26067092--26067142
5
10.2
5
81
10
52
80
0
0
19
0.71
26067094--26067144
6
8.7
6
78
18
54
82
0
0
17
0.67
26067092--26067144
19
3.0
18
86
10
74
81
0
0
18
0.70
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26067096--26067143
24
2.0
25
87
4
71
81
0
0
18
0.70
26067628--26067667
2
20.0
2
100
0
80
50
0
0
50
1.00
26067960--26068022
3
22.0
3
77
6
60
60
0
0
39
0.97
26068333--26068373
14
3.1
14
82
10
50
80
14
4
0
0.87
26068956--26068987
12
2.7
12
100
0
64
15
25
34
25
1.95
26069516--26069617
15
6.8
15
69
15
68
48
29
0
21
1.57
26069594--26069645
15
3.4
15
75
2
59
48
23
1
26
1.62
26070184--26070227
21
2.0
21
82
8
52
36
2
6
54
1.40
26071246--26071298
21
2.4
22
81
15
65
56
1
0
41
1.10
26073270--26073295
2
13.0
2
100
0
52
50
0
0
50
1.00
26073776--26073801
6
4.3
6
100
0
52
84
0
0
15
0.62
26074209--26074263
18
3.2
16
80
14
56
54
0
0
45
0.99
26074205--26074284
37
2.4
31
78
16
79
53
0
0
46
1.00
26074262--26074332
28
2.4
30
88
6
110
49
0
0
50
1.00
26074388--26074461
18
4.0
18
87
6
112
8
43
16
32
1.77
26074399--26074458
20
3.1
20
85
9
97
6
40
15
38
1.73
26078016--26078052
2
18.5
2
100
0
74
51
0
0
48
1.00
26087650--26087684
2
17.5
2
100
0
70
51
0
0
48
1.00
26088408--26088474
28
2.4
28
89
0
98
29
13
16
40
1.87
26100713--26100778
28
2.4
28
92
0
105
28
9
18
43
1.80
26101109--26101142
8
4.2
8
84
0
50
29
0
0
70
0.87
26101104--26101143
16
2.6
16
88
7
57
32
0
0
67
0.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26101137--26101180
19
2.3
19
81
11
54
47
4
0
47
1.22
26107297--26107325
15
1.9
15
100
0
58
58
0
0
41
0.98
26107333--26107358
6
4.3
6
100
0
52
69
0
0
30
0.89
26107401--26107427
2
13.5
2
100
0
54
51
0
0
48
1.00
26107831--26107886
29
1.9
29
88
0
85
60
7
3
28
1.40
26107831--26107897
27
2.4
29
85
9
86
61
8
4
25
1.45
26107831--26107912
29
2.9
28
80
15
80
62
7
3
26
1.39
26109037--26109068
17
1.9
17
93
6
57
46
0
0
53
1.00
26115002--26115071
30
2.3
31
85
2
97
50
7
4
38
1.50
26120578--26120613
2
18.0
2
100
0
72
0
50
0
50
1.00
26123392--26123423
15
2.1
15
94
0
55
25
15
15
43
1.86
26123436--26123473
2
19.5
2
94
5
69
50
0
0
50
1.00
26131080--26131153
36
2.2
33
85
9
96
51
2
2
43
1.30
26131823--26131856
16
2.1
16
100
0
68
29
5
20
44
1.75
26133370--26133407
2
19.0
2
94
0
67
50
0
2
47
1.15
26134098--26134132
13
2.7
13
90
0
52
34
0
5
60
1.21
26145433--26145497
16
3.9
17
76
12
55
47
3
0
49
1.17
26149110--26149158
6
7.8
6
78
17
55
14
4
2
79
0.97
26149109--26149166
12
4.7
12
77
8
53
13
3
3
79
0.99
26157133--26157257
52
2.5
50
81
5
144
44
10
19
26
1.83
26158164--26158205
22
2.0
21
85
4
57
40
4
0
54
1.21
26161924--26161964
2
20.5
2
89
0
64
46
4
0
48
1.23
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26162465--26162516
20
2.5
21
87
9
72
42
0
0
57
0.98
26167473--26167498
10
2.6
10
100
0
52
42
7
7
42
1.62
26168700--26168766
13
5.2
12
76
15
55
61
0
2
35
1.12
26168702--26168752
24
2.0
24
85
7
66
58
0
3
37
1.16
26168955--26169000
20
2.3
20
77
3
58
58
2
4
34
1.30
26176114--26176152
20
1.9
20
84
5
51
30
30
20
17
1.96
26177132--26177306
87
2.0
87
96
0
323
32
18
21
28
1.96
26178023--26178241
117
1.9
117
85
5
309
15
24
31
28
1.96
26180203--26180274
31
2.2
33
80
11
87
51
1
1
45
1.18
26186759--26186815
28
2.0
28
83
6
71
49
3
0
47
1.18
26188030--26188087
18
3.4
17
79
9
64
67
0
0
32
0.91
26188028--26188117
18
5.1
17
68
13
58
62
0
0
37
0.96
26188072--26188144
29
2.6
30
85
12
102
54
0
1
43
1.08
26201535--26201576
20
2.2
19
86
4
57
76
2
14
7
1.10
26204319--26204357
2
19.5
2
100
0
78
51
0
0
48
1.00
26208340--26208379
13
3.1
13
82
13
55
42
2
0
55
1.13
26208577--26208618
15
2.9
15
75
3
50
47
2
0
50
1.14
26208579--26208657
30
2.6
29
86
7
104
41
7
0
50
1.31
26209503--26209543
19
2.2
18
91
4
64
46
0
0
53
1.00
26209505--26209560
23
2.5
22
82
8
76
44
1
0
53
1.11
26209738--26209803
22
2.9
23
78
13
82
40
0
0
59
0.98
26209743--26209789
12
4.0
12
81
13
53
42
0
0
57
0.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26209850--26209911
27
2.3
27
83
8
74
50
3
6
40
1.44
26210278--26210346
5
13.4
5
73
11
59
55
2
4
37
1.35
26210252--26210344
47
2.0
48
93
2
161
51
4
5
38
1.44
26214262--26214574
159
2.0
159
89
0
482
28
18
16
36
1.93
26220841--26220877
13
2.8
13
87
4
56
64
8
5
21
1.40
26221659--26221868
105
2.0
105
95
0
375
29
23
14
32
1.94
26227919--26227951
2
17.0
2
87
6
50
48
3
0
48
1.17
26229795--26229829
2
17.5
2
93
0
61
54
0
45
0
0.99
26232324--26232368
22
2.0
22
87
8
65
53
0
6
40
1.27
26242650--26242747
42
2.4
39
76
12
99
48
2
2
46
1.25
26249809--26249853
20
2.3
19
81
11
54
55
2
2
40
1.24
26251427--26251465
17
2.2
17
90
4
60
35
2
0
61
1.10
26251440--26251482
22
2.0
22
85
0
59
44
2
0
53
1.13
26252350--26252409
13
4.7
13
72
15
54
36
0
1
61
1.06
26252345--26252457
31
3.6
31
70
12
81
45
0
0
53
1.12
26252464--26252532
29
2.4
28
76
9
77
36
1
1
60
1.14
26252471--26252523
5
10.6
5
80
11
56
33
1
1
62
1.17
26253639--26253669
12
2.6
12
94
0
53
83
16
0
0
0.64
26254818--26254867
16
3.1
17
81
16
61
52
0
0
48
1.00
26256013--26256097
25
3.2
26
73
20
77
52
0
0
47
1.00
26256031--26256104
30
2.5
29
81
14
89
51
0
0
48
1.00
26256031--26256111
31
2.6
30
83
12
94
49
0
1
49
1.08
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26257530--26257558
5
6.0
5
92
8
51
41
0
0
58
0.98
26258292--26258341
21
2.3
20
80
12
55
58
4
4
34
1.36
26271946--26271976
3
10.3
3
100
0
62
32
0
0
67
0.91
26274674--26274824
80
1.9
79
91
1
248
33
21
13
31
1.93
26279400--26279439
4
10.0
4
94
0
71
22
0
25
52
1.47
26285707--26285758
18
2.7
20
79
14
63
53
0
0
46
1.00
26285743--26285789
16
2.9
16
87
3
67
65
0
0
34
0.93
26285743--26285803
8
7.6
8
76
12
54
65
0
0
34
0.93
26295182--26295212
2
15.5
2
93
0
53
45
0
51
3
1.17
26296625--26296657
16
2.1
16
88
11
50
51
0
0
48
1.00

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147