Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168270.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_5, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27802247

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   

This is table  30  of  147  ( 17591 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6209161--6209225
32
2.0
32
93
0
112
55
10
16
16
1.69
6210319--6210356
16
2.4
16
86
0
58
5
0
18
76
0.97
6213553--6213597
13
3.5
13
85
8
56
66
2
6
24
1.27
6213591--6213657
29
2.4
28
76
14
66
59
2
1
35
1.22
6217120--6217175
27
2.1
27
89
0
85
50
0
35
14
1.43
6219002--6219051
21
2.3
21
82
3
55
48
4
10
38
1.56
6225672--6225717
21
2.2
21
84
7
58
47
4
0
47
1.21
6234997--6235021
2
12.5
2
100
0
50
0
48
0
52
1.00
6236612--6236655
22
2.0
22
86
0
61
43
13
11
31
1.80
6240672--6240715
22
2.0
22
95
0
79
43
13
11
31
1.80
6240679--6240727
22
2.2
22
82
7
55
48
12
12
26
1.75
6247573--6247629
30
1.9
30
89
7
89
36
1
12
49
1.51
6247612--6247669
18
3.1
18
71
9
53
41
0
3
55
1.17
6247719--6247766
17
2.8
16
81
15
51
50
0
0
50
1.00
6248294--6248320
11
2.5
11
100
0
54
62
11
18
7
1.50
6260744--6260792
17
2.7
19
82
14
59
53
0
0
46
1.00
6272500--6272541
22
1.9
22
81
18
52
45
11
14
28
1.80
6289796--6289833
5
7.6
5
87
0
58
23
23
15
36
1.94
6290815--6290843
14
2.1
14
93
6
51
37
13
0
48
1.43
6292031--6292089
25
2.3
25
79
5
64
38
15
10
35
1.81
6293051--6293228
77
2.4
74
78
8
189
29
19
6
44
1.75
6295424--6295599
74
2.4
76
76
10
177
32
15
10
40
1.82
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6296871--6296908
20
2.0
20
89
5
60
63
2
0
34
1.09
6296869--6296921
26
2.0
26
85
7
72
66
3
0
30
1.10
6296938--6296976
6
6.5
6
85
8
53
38
0
0
61
0.96
6296938--6296985
25
1.9
25
83
8
62
39
2
0
58
1.10
6298351--6298768
77
5.5
73
69
13
211
31
17
6
44
1.75
6301611--6301651
20
2.0
20
100
0
82
29
9
0
60
1.28
6301786--6301872
33
2.6
32
77
16
81
33
17
16
33
1.92
6304695--6304920
114
2.0
114
92
1
382
42
19
15
22
1.89
6305798--6305827
12
2.6
11
90
10
51
46
0
0
53
1.00
6309880--6309915
18
2.0
18
100
0
72
16
27
27
27
1.97
6313629--6313808
98
1.8
98
93
0
315
41
18
17
22
1.91
6315394--6315459
18
3.3
19
84
15
73
48
0
0
51
1.00
6315398--6315462
22
3.2
20
83
14
80
50
0
0
49
1.00
6317785--6317849
27
2.4
28
76
10
71
41
0
3
55
1.15
6322934--6322963
13
2.3
13
94
0
51
40
0
10
50
1.36
6324026--6324078
26
2.1
25
86
6
72
54
0
0
45
0.99
6324882--6324923
21
2.0
20
90
4
66
66
0
0
33
0.92
6328149--6328203
27
2.0
27
96
0
101
30
29
1
38
1.68
6329967--6330025
28
2.1
28
93
0
100
52
3
1
42
1.28
6330020--6330059
18
2.2
18
86
8
55
42
0
0
57
0.98
6347606--6347656
11
4.5
11
85
11
68
68
0
1
29
1.00
6348273--6348306
2
17.0
2
93
0
59
50
2
47
0
1.16
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6349191--6349263
20
3.8
20
77
12
71
52
0
0
47
1.00
6361937--6362042
53
2.0
53
94
0
185
54
14
13
17
1.71
6366310--6366347
2
19.0
2
100
0
76
50
0
50
0
1.00
6373500--6373542
14
2.9
15
89
6
61
30
0
6
62
1.21
6373520--6373561
19
2.2
19
83
8
50
33
0
4
61
1.17
6374895--6374931
18
2.1
18
90
10
58
37
0
0
62
0.96
6374958--6375011
20
2.6
21
81
18
69
59
0
0
40
0.98
6379908--6379949
22
2.0
22
86
13
61
54
2
0
42
1.13
6388715--6388754
20
2.0
20
85
9
55
47
0
2
50
1.14
6388773--6388813
19
2.3
18
84
12
57
68
2
0
29
1.03
6389544--6389584
8
5.2
8
80
16
50
60
0
0
39
0.96
6389540--6389579
14
2.7
15
88
11
64
62
0
0
37
0.95
6389676--6389714
20
1.9
21
84
5
53
48
2
0
48
1.15
6390252--6390284
2
16.5
2
93
0
57
48
3
0
48
1.17
6391256--6391301
22
2.0
24
87
8
69
45
0
0
54
0.99
6391330--6391372
9
4.5
10
80
8
54
65
0
0
34
0.93
6391330--6391372
19
2.2
20
84
12
63
65
0
0
34
0.93
6396197--6396420
79
2.8
78
77
11
226
41
24
9
24
1.84
6406834--6407627
134
6.1
134
75
9
475
39
18
12
29
1.88
6407212--6407624
136
3.1
132
80
6
383
39
17
11
31
1.85
6407947--6407972
1
26.0
1
100
0
52
0
0
100
0
0.00
6409702--6409735
17
1.9
18
88
5
52
23
11
2
61
1.43
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6409639--6409742
52
2.0
51
86
1
145
27
19
7
45
1.77
6414347--6414381
2
18.0
2
88
5
54
48
0
0
51
1.00
6416426--6416455
14
2.1
14
100
0
60
30
33
23
13
1.93
6417393--6417426
12
2.8
12
90
0
50
35
0
5
58
1.22
6418036--6418066
11
2.8
11
90
0
53
45
3
0
51
1.17
6418101--6418130
11
2.6
11
94
5
51
30
0
0
70
0.88
6418110--6418182
10
6.9
10
78
7
56
32
2
1
63
1.17
6418132--6418198
10
6.7
10
73
11
57
32
2
1
62
1.19
6418161--6418198
15
2.5
16
79
12
53
34
0
0
65
0.93
6418592--6418641
18
2.9
17
83
16
68
50
0
0
50
1.00
6421029--6421075
22
2.2
22
84
3
60
57
2
19
21
1.51
6425487--6425558
30
2.4
30
78
0
81
33
16
19
30
1.94
6437066--6437114
6
8.3
6
81
4
55
40
0
4
55
1.19
6437923--6437974
24
2.2
24
89
3
79
48
0
1
50
1.12
6437936--6437998
17
3.7
17
75
8
58
47
1
0
50
1.10
6438042--6438100
22
2.5
24
81
5
68
37
0
0
62
0.95
6441894--6441959
31
2.0
34
88
8
102
31
21
7
39
1.81
6463969--6464068
51
2.0
51
82
4
121
37
15
15
33
1.88
6465027--6465180
84
1.8
84
83
2
202
23
9
25
41
1.84
6476948--6477185
118
2.0
118
97
0
449
25
12
25
37
1.90
6480565--6480593
14
2.0
15
93
6
51
31
0
13
55
1.39
6480757--6480814
20
2.8
20
77
12
73
56
0
0
43
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6493987--6494081
43
2.3
41
78
10
104
53
1
1
44
1.14
6494002--6494053
26
2.0
26
84
0
68
50
1
1
46
1.23
6494342--6494405
27
2.4
26
82
7
67
50
6
6
37
1.53
6499809--6499839
15
2.1
15
94
5
55
22
0
0
77
0.77
6508148--6508184
2
18.5
2
94
0
65
48
0
0
51
1.00
6510614--6510647
2
17.5
2
87
6
52
44
0
0
55
0.99
6516025--6516058
17
2.1
16
88
5
50
38
2
5
52
1.41
6519341--6519387
24
1.9
25
91
4
78
57
17
0
25
1.40
6522775--6522804
2
15.0
2
100
0
60
50
0
0
50
1.00
6523621--6523647
13
2.1
13
100
0
54
77
7
0
14
0.97
6532661--6532687
13
2.1
13
100
0
54
25
14
14
44
1.84
6532931--6532986
25
2.2
25
78
6
60
50
3
0
46
1.19
6536482--6536665
97
1.9
97
90
0
296
21
22
21
35
1.96
6538793--6538833
21
2.0
21
90
4
66
46
2
0
51
1.14
6539613--6539649
19
1.9
19
88
0
56
16
0
2
81
0.81
6540812--6540859
15
3.1
15
84
3
51
52
0
0
47
1.00
6540834--6540863
16
1.9
15
93
6
51
36
0
0
63
0.95
6545039--6545069
2
15.5
2
100
0
62
51
0
0
48
1.00
6546169--6546194
5
5.2
5
100
0
52
23
38
0
38
1.55
6564830--6564866
19
1.9
19
89
10
58
24
2
0
72
0.97
6573068--6573124
19
2.8
20
74
12
55
40
0
1
57
1.09
6575460--6575572
10
11.7
10
70
13
67
26
0
6
67
1.14
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6575506--6575539
16
2.1
17
88
5
52
23
0
11
64
1.26
6575493--6575570
15
5.3
15
79
10
72
26
0
7
65
1.20
6577973--6578023
16
3.2
16
81
15
54
54
0
1
43
1.11
6578294--6578330
19
1.9
19
88
0
56
37
0
8
54
1.30
6579531--6579593
33
1.9
33
93
6
110
47
11
3
38
1.55
6589605--6589669
32
2.0
32
87
0
94
44
0
6
49
1.27
6590089--6590117
13
2.1
14
93
6
51
65
0
10
24
1.23
6591826--6591868
19
2.2
19
87
4
59
34
2
0
62
1.08
6591903--6591962
16
4.0
15
85
12
70
58
0
0
41
0.98
6591904--6591962
30
2.0
29
86
3
82
59
0
0
40
0.97

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147