Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite: G. Benson, "Tandem repeats finder: a program to analyze DNA sequences" Nucleic Acid Research(1999) Vol. 27, No. 2, pp. 573-580. Sequence: Dt_chr7 Parameters: 2 7 7 80 10 50 1000 Length: 47983841

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   

This is table  96  of  153  ( 18265 repeats found )
Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30376776--30376996
120
1.8
121
84
8
308
24
28
23
23
2.00
30377175--30377340
46
3.6
46
76
8
158
31
18
27
23
1.97
30377628--30377669
20
2.1
20
95
0
75
38
26
7
28
1.82
30379601--30379752
43
3.6
41
74
13
128
33
22
17
26
1.96
30388313--30388370
27
2.1
28
90
3
91
37
13
18
29
1.90
30396802--30396862
31
2.0
31
83
3
79
34
13
22
29
1.92
30397049--30397100
27
1.9
27
100
0
104
32
11
7
48
1.68
30397404--30397565
50
3.4
46
75
9
164
24
18
30
26
1.98
30403077--30403137
31
2.0
31
83
3
79
34
13
22
29
1.92
30403642--30403982
50
6.9
50
83
4
406
29
17
30
23
1.97
30408155--30408210
27
2.1
27
86
6
78
37
14
14
33
1.86
30410980--30411036
25
2.3
24
90
6
87
36
5
36
21
1.76
30412436--30412547
27
4.2
27
89
1
154
16
24
21
38
1.93
30415050--30415206
48
3.3
48
84
4
228
24
26
17
30
1.97
30415050--30415258
94
2.2
94
87
7
291
23
26
18
31
1.98
30423130--30423231
27
3.8
26
69
15
75
32
16
19
31
1.94
30423090--30423247
53
3.0
53
89
5
214
31
15
17
34
1.92
30423157--30423236
26
3.0
26
68
13
74
30
17
17
35
1.93
30423565--30423606
18
2.3
18
84
8
50
23
19
11
45
1.83
30428499--30428763
103
2.6
104
90
3
417
29
29
20
19
1.97
30429091--30429155
30
2.2
29
81
8
76
30
27
6
35
1.81
30429098--30429155
30
1.9
30
85
0
80
31
24
6
37
1.82
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30438269--30438305
19
1.9
19
94
0
65
64
5
10
18
1.43
30441083--30441204
38
3.2
39
76
13
112
42
16
7
33
1.76
30447583--30447623
19
2.1
19
86
9
55
78
7
4
9
1.10
30450247--30450301
21
2.8
21
81
8
71
36
0
27
36
1.57
30453540--30453590
18
2.9
17
75
18
50
52
1
1
43
1.23
30453545--30453589
18
2.5
19
79
17
51
55
2
2
40
1.24
30474478--30474698
110
2.0
110
100
0
442
36
9
11
42
1.75
30476718--30476752
3
11.7
3
100
0
70
0
65
0
34
0.93
30483632--30483747
61
1.9
58
89
5
178
41
3
4
50
1.39
30483634--30483767
58
2.2
60
84
8
168
41
2
5
49
1.42
30487345--30487605
53
4.9
53
81
3
283
37
12
22
27
1.90
30492159--30492199
14
2.9
14
92
3
64
46
0
9
43
1.36
30493337--30493420
20
4.1
20
72
16
57
70
2
3
23
1.15
30493337--30493382
19
2.3
19
85
7
56
71
2
2
23
1.08
30493345--30493383
19
2.0
19
90
5
60
69
0
2
28
1.02
30497684--30497735
26
2.0
27
84
3
70
32
1
3
61
1.25
30497760--30497795
18
2.0
18
88
0
54
36
0
2
61
1.11
30497734--30497809
30
2.5
29
81
12
82
32
2
3
60
1.29
30498166--30498231
31
2.2
30
89
10
100
54
0
1
43
1.09
30499469--30499602
63
2.1
64
91
4
216
23
41
5
29
1.76
30514375--30514796
109
3.9
109
93
1
670
34
18
16
31
1.92
30516985--30517072
40
2.2
40
93
4
151
23
22
21
31
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30517064--30517535
44
10.8
45
73
10
257
27
21
20
30
1.98
30517064--30517537
218
2.2
218
96
0
858
27
21
20
30
1.98
30529121--30529435
109
2.9
110
89
4
433
36
18
14
30
1.91
30531996--30532889
154
5.8
154
100
0
1788
39
19
13
27
1.89
30546550--30546580
5
6.2
5
96
0
53
35
41
0
22
1.54
30551497--30551589
45
2.1
45
97
0
177
25
22
8
43
1.82
30554574--30554850
123
2.2
125
96
2
506
29
16
20
33
1.95
30561512--30561647
73
1.9
73
82
3
175
23
25
25
25
2.00
30562640--30562674
15
2.4
15
90
4
54
48
0
8
42
1.33
30565429--30565569
69
2.0
69
93
0
237
31
21
19
27
1.97
30566691--30566757
4
16.5
4
73
22
52
22
4
0
73
1.01
30566691--30566732
18
2.3
18
88
8
59
21
4
0
73
1.01
30566685--30566757
17
4.4
16
77
17
69
21
4
0
73
0.99
30566685--30566757
22
3.3
22
74
18
71
21
4
0
73
0.99
30568212--30568326
25
4.6
25
71
14
85
33
20
26
19
1.96
30575400--30575493
25
3.8
24
72
13
84
35
20
23
21
1.96
30575769--30575885
59
2.0
61
96
3
220
24
22
11
41
1.86
30579754--30579814
24
2.5
24
84
5
79
45
0
36
18
1.49
30580504--30580561
29
2.0
29
100
0
116
34
13
10
41
1.79
30585847--30585899
24
2.2
24
90
3
81
52
1
0
45
1.11
30585847--30585908
24
2.8
22
81
11
65
54
1
0
43
1.09
30589031--30589107
25
3.0
25
84
9
84
38
1
1
58
1.15
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30598153--30598236
10
9.8
8
70
30
50
42
2
0
54
1.13
30598143--30598194
19
2.7
19
91
5
79
44
0
0
55
0.99
30598172--30598294
26
4.6
27
77
8
142
43
3
0
52
1.17
30619074--30619114
19
2.1
20
86
4
57
26
14
14
43
1.84
30620975--30621034
26
2.3
26
88
0
84
36
10
6
46
1.64
30631784--30631816
13
2.7
13
90
9
52
81
3
6
9
0.95
30632513--30632627
51
2.3
51
80
3
124
26
23
15
33
1.95
30632765--30632964
44
4.5
44
69
9
129
25
28
19
27
1.98
30632605--30633101
132
3.8
132
85
3
622
26
24
19
29
1.99
30633680--30633704
12
2.1
12
100
0
50
36
8
32
24
1.84
30641303--30641337
12
3.0
12
91
4
54
31
2
0
65
1.07
30641457--30641519
30
2.1
30
90
0
99
57
14
1
26
1.47
30652106--30652139
17
2.0
17
94
0
59
32
5
20
41
1.76
30654258--30654373
39
3.0
38
92
2
196
50
27
3
18
1.63
30654509--30654571
17
3.5
17
69
12
54
34
3
12
49
1.57
30654506--30654580
37
2.0
37
94
0
132
36
4
14
45
1.64
30655461--30655501
19
2.1
20
90
4
66
58
2
0
39
1.11
30661503--30661693
96
2.0
96
81
2
222
30
22
17
29
1.96
30661849--30661893
23
2.0
23
86
8
65
35
20
22
22
1.96
30666650--30666963
104
3.0
104
97
0
583
40
14
13
31
1.84
30668929--30668986
25
2.3
25
82
5
73
31
24
13
31
1.94
30669720--30669946
118
1.9
117
88
2
339
29
23
8
38
1.84
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30673082--30673133
27
1.9
27
88
0
77
30
3
11
53
1.54
30673844--30673877
15
2.3
15
90
10
52
32
5
35
26
1.81
30680993--30681092
39
2.6
39
81
0
101
35
4
17
44
1.67
30682673--30682735
32
2.0
30
85
11
83
22
23
33
20
1.97
30688077--30688119
21
2.0
21
82
8
52
11
25
13
48
1.77
30692257--30692389
70
1.9
67
86
4
185
31
11
14
42
1.81
30693263--30693312
20
2.5
20
80
0
64
16
26
24
34
1.95
30699364--30699392
14
2.1
14
100
0
58
27
58
0
13
1.36
30711966--30712047
31
2.6
31
84
0
101
41
12
13
32
1.81
30711972--30712062
31
2.9
31
80
0
83
41
13
13
31
1.82
30712596--30712633
15
2.6
15
87
4
51
31
18
0
50
1.47
30712958--30713255
113
2.6
112
80
8
336
26
21
23
27
1.99
30713746--30713843
21
4.5
21
71
12
72
17
1
41
39
1.56
30713746--30713843
7
13.4
7
72
16
65
17
1
41
39
1.56
30714116--30714201
38
2.2
39
87
4
120
20
2
39
37
1.66
30716403--30716482
31
2.6
31
87
0
115
21
16
18
43
1.88
30719145--30719215
21
3.4
21
88
0
106
30
18
46
4
1.68
30719532--30719650
42
2.8
42
87
2
159
32
22
22
21
1.98
30724255--30724280
12
2.2
12
100
0
52
0
7
15
76
0.99
30725781--30725831
18
2.9
19
80
13
65
60
0
11
27
1.31
30725798--30725842
18
2.4
19
85
7
65
62
0
11
26
1.29
30726013--30726066
25
2.2
24
86
3
72
57
0
7
35
1.27
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30726049--30726100
18
2.9
18
83
8
54
65
1
9
23
1.32
30726111--30726207
5
17.6
5
68
17
50
55
2
17
24
1.52
30726111--30726312
28
7.5
28
71
13
104
60
1
14
23
1.43
30726045--30726161
17
7.4
16
73
17
68
59
0
13
25
1.40
30726183--30726317
16
8.0
16
74
17
96
65
0
12
21
1.31
30726267--30726312
5
8.6
5
84
13
56
60
0
17
21
1.35
30726225--30726281
20
2.8
20
82
10
64
66
0
8
24
1.20
30726275--30726309
11
3.0
12
83
8
54
54
0
22
22
1.45
30726877--30726911
18
2.0
17
88
5
52
54
0
0
45
0.99
30726764--30727080
157
2.0
157
95
0
571
44
2
4
47
1.38

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153