Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite: G. Benson, "Tandem repeats finder: a program to analyze DNA sequences" Nucleic Acid Research(1999) Vol. 27, No. 2, pp. 573-580. Sequence: Gbar_D13 Parameters: 2 7 7 80 10 50 1000 Length: 60343961

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   

This is table  163  of  204  ( 24404 repeats found )
Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
49234489--49234571
43
1.9
43
85
0
112
56
13
15
14
1.67
49237607--49237632
5
5.2
5
100
0
52
0
19
0
80
0.71
49240193--49240508
79
4.0
79
88
0
398
20
18
24
37
1.94
49240704--49240851
76
1.9
76
89
5
228
45
20
12
21
1.84
49242097--49242155
24
2.5
24
86
8
84
32
22
27
18
1.97
49242099--49242168
24
2.9
24
85
6
70
31
24
27
17
1.97
49242177--49242241
25
2.6
25
77
0
76
35
18
27
18
1.94
49244425--49244457
2
16.5
2
100
0
66
51
0
48
0
1.00
49244749--49244800
18
2.8
19
77
8
63
42
1
5
50
1.37
49251521--49251711
36
5.0
36
83
12
238
37
13
20
29
1.90
49251485--49251675
82
2.3
82
95
0
337
37
12
21
29
1.89
49258434--49258475
14
3.2
13
83
12
50
57
2
4
35
1.33
49258765--49258795
15
2.0
16
93
6
55
58
9
0
32
1.31
49262220--49262299
30
2.7
28
71
17
72
42
16
0
41
1.48
49271673--49271744
26
2.8
25
70
6
72
19
23
19
37
1.94
49271784--49271889
49
2.2
49
81
3
124
19
23
20
35
1.96
49275973--49276029
30
1.9
30
85
0
78
14
21
36
28
1.92
49275863--49276154
139
2.1
139
96
0
539
19
23
32
23
1.97
49277266--49277292
14
1.9
14
100
0
54
51
7
18
22
1.70
49278861--49278888
12
2.3
12
100
0
56
50
0
25
25
1.50
49282800--49282883
43
2.0
43
82
0
105
23
21
19
35
1.96
49285279--49285317
20
1.9
21
89
5
62
35
5
2
56
1.35
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
49285985--49286020
14
2.6
14
95
0
63
38
5
25
30
1.78
49286613--49286673
19
3.2
18
76
19
61
52
0
0
47
1.00
49290161--49290212
15
3.6
15
80
12
56
44
0
1
53
1.11
49290099--49290328
120
1.9
120
100
0
460
41
1
6
49
1.40
49290109--49290296
61
3.1
61
70
14
208
42
1
7
48
1.40
49290290--49290331
15
2.7
16
82
14
52
45
0
2
52
1.13
49290281--49290322
15
2.9
15
82
10
52
47
0
0
52
1.00
49290476--49290566
45
2.0
44
85
2
119
35
28
5
30
1.80
49290547--49290598
16
3.2
16
97
0
95
36
36
0
26
1.57
49291783--49291823
19
2.2
19
86
8
57
70
7
12
9
1.33
49293175--49293221
20
2.3
21
75
10
53
61
6
6
25
1.44
49293429--49293466
12
3.1
12
82
17
51
81
2
0
15
0.80
49293550--49293647
29
3.5
28
73
16
94
31
6
2
60
1.33
49293529--49293686
10
16.7
10
64
17
52
27
5
3
63
1.33
49293544--49293699
56
2.7
56
78
7
154
29
4
3
62
1.33
49293567--49293693
27
4.5
28
75
11
109
29
3
3
62
1.28
49293632--49293672
18
2.2
18
91
4
64
19
4
2
73
1.13
49299436--49299551
56
2.1
56
98
0
223
46
17
11
25
1.80
49304719--49304794
29
2.6
29
97
0
143
25
11
14
48
1.77
49312309--49312349
15
2.4
18
80
15
52
34
7
0
58
1.26
49312442--49312475
5
6.6
5
93
6
59
17
0
0
82
0.67
49316328--49316386
30
2.0
30
93
0
100
57
10
3
28
1.48
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
49316530--49316560
11
2.8
11
95
0
53
16
35
38
9
1.81
49322071--49322143
32
2.3
32
97
0
137
27
1
19
52
1.54
49322244--49322336
48
1.9
48
100
0
186
36
15
25
22
1.93
49323478--49323514
19
1.9
19
88
0
56
59
2
2
35
1.26
49339328--49339383
21
2.7
21
88
0
85
26
5
35
32
1.79
49339938--49339991
21
2.5
22
82
8
67
31
7
33
27
1.84
49340079--49340146
30
2.3
29
95
5
127
35
8
0
55
1.31
49340114--49340186
22
3.3
22
64
21
62
35
9
0
54
1.33
49340132--49340161
15
2.0
15
100
0
60
26
6
0
66
1.16
49340102--49340187
44
1.9
45
97
2
165
34
9
0
55
1.32
49342662--49342717
23
2.5
22
78
18
53
21
5
5
67
1.31
49342662--49342714
24
2.2
23
78
21
56
22
5
5
66
1.35
49344201--49344248
23
2.1
23
84
7
62
41
6
2
50
1.39
49355224--49355288
29
2.2
29
86
5
87
27
10
9
52
1.67
49362111--49362170
18
3.3
17
78
17
59
60
0
1
38
1.07
49362114--49362170
19
3.1
18
80
7
62
57
0
1
40
1.09
49362140--49362195
26
2.1
27
83
9
71
55
1
0
42
1.10
49362432--49362545
10
11.8
10
70
10
69
29
3
1
64
1.20
49362400--49362541
19
7.4
19
70
13
76
29
4
2
63
1.27
49362385--49362552
57
2.9
57
84
7
178
30
5
2
61
1.31
49362634--49362802
85
2.0
85
83
3
216
34
9
17
37
1.83
49366243--49366293
20
2.5
20
75
12
59
37
5
0
56
1.23
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
49370562--49370713
37
3.9
37
80
13
164
26
22
15
36
1.93
49370630--49370988
46
7.6
46
85
8
461
29
22
14
34
1.93
49370630--49370988
188
1.9
190
91
1
596
29
22
14
34
1.93
49370630--49370988
98
3.7
97
86
7
507
29
22
14
34
1.93
49384372--49384763
191
2.0
195
91
3
639
29
17
20
32
1.96
49384429--49385430
500
2.0
500
99
0
1986
29
18
21
30
1.97
49386698--49386755
28
2.1
28
96
0
107
31
13
8
46
1.74
49391553--49391855
112
2.7
111
84
4
351
21
21
21
35
1.96
49394981--49395048
22
3.1
22
66
16
59
51
10
0
38
1.36
49395197--49395235
20
2.0
20
94
0
69
64
2
10
23
1.37
49395246--49395287
17
2.5
17
92
3
68
69
0
11
19
1.19
49395246--49395280
16
2.2
16
94
0
61
71
0
14
14
1.15
49395741--49395812
5
13.2
5
75
16
63
54
0
16
29
1.43
49395742--49395832
11
8.7
11
70
15
68
49
0
16
34
1.46
49395741--49395809
28
2.5
28
88
4
104
53
0
15
30
1.43
49395759--49395840
32
2.5
33
90
4
121
48
0
18
32
1.48
49395933--49395971
21
1.9
20
89
5
60
64
0
12
23
1.28
49395929--49395986
21
2.7
22
79
10
59
63
0
12
24
1.28
49398713--49398903
88
2.1
89
89
1
285
52
14
5
27
1.63
49399613--49399937
112
2.9
111
87
3
456
30
22
21
25
1.99
49415533--49415562
13
2.3
13
94
0
51
40
40
0
20
1.52
49415703--49415761
9
6.4
9
79
11
57
23
10
23
42
1.85
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
49419075--49419124
26
1.9
26
91
0
82
52
0
4
44
1.20
49429523--49429568
23
2.0
23
83
8
58
28
2
4
65
1.23
49429865--49429906
20
2.3
17
88
12
57
14
2
7
76
1.10
49435659--49436248
44
13.6
43
69
15
234
29
21
22
26
1.99
49435630--49436339
217
3.3
217
92
0
1163
29
21
22
26
1.99
49438343--49438384
19
2.2
20
82
4
50
28
7
14
50
1.69
49440542--49440608
32
2.1
32
94
0
116
16
28
43
11
1.83
49441486--49441521
5
6.8
5
90
9
54
22
0
2
75
0.94
49448284--49448474
94
2.0
94
100
0
382
41
9
16
31
1.80
49448612--49448670
30
1.9
30
86
3
82
49
3
18
28
1.64
49449837--49450032
21
9.3
21
65
9
87
16
19
17
46
1.84
49449836--49450029
84
2.3
85
78
9
191
16
20
17
46
1.84
49449836--49450032
42
4.7
42
76
6
159
16
19
17
46
1.84
49451552--49451682
65
2.0
65
100
0
262
36
19
6
37
1.77
49452126--49452172
24
2.0
24
87
8
69
48
14
0
36
1.44
49477509--49477720
44
4.6
47
68
18
142
46
3
2
46
1.35
49477509--49477767
91
2.8
91
94
2
457
47
3
2
45
1.35
49477783--49478178
120
3.4
119
85
10
604
42
2
5
50
1.35
49477652--49478186
226
2.4
220
87
6
740
43
2
4
48
1.37
49478143--49478184
15
2.7
16
82
14
52
45
0
2
52
1.13
49478134--49478175
15
2.9
15
82
10
52
47
0
0
52
1.00
49478330--49478419
45
2.0
45
85
6
121
36
27
5
30
1.80
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
49478700--49478791
29
3.2
29
72
9
71
63
1
2
33
1.14
49482227--49482282
27
2.0
27
83
10
69
55
8
8
26
1.60
49489794--49489837
21
2.1
21
100
0
88
43
31
15
9
1.79
49492109--49492853
379
2.0
379
98
0
1456
41
17
16
24
1.89
49492837--49492868
15
2.1
15
94
0
55
31
15
0
53
1.43
49493500--49493646
64
2.3
64
97
0
285
41
13
8
36
1.76
49496923--49496965
23
2.0
23
81
9
54
65
2
0
32
1.06
49497207--49497259
21
2.5
21
93
0
88
30
39
9
20
1.84
49500622--49500651
14
2.2
13
94
5
51
56
0
13
30
1.37
49502182--49502278
9
10.1
10
69
20
55
62
3
3
30
1.25

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204