Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_D13
Parameters: 2 7 7 80 10 50 1000
Length:  60343961

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   

This is table  191  of  204  ( 24404 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
56766569--56766859
45
6.2
45
78
10
280
41
19
18
21
1.91
56766563--56766760
88
2.2
89
87
1
281
39
19
19
21
1.93
56766743--56766775
6
5.5
6
100
0
66
48
15
18
18
1.81
56766051--56766757
373
1.9
375
96
1
1301
36
21
17
24
1.94
56766698--56766820
57
2.2
57
90
0
192
44
16
17
21
1.86
56766655--56766859
102
2.0
100
85
1
275
42
18
18
21
1.89
56771038--56771085
21
2.3
21
82
3
62
52
0
4
43
1.20
56773417--56773499
38
2.3
38
85
6
109
37
3
6
53
1.43
56773572--56773606
17
2.1
18
89
10
56
60
0
0
40
0.97
56779664--56779708
24
2.0
22
82
8
54
53
2
0
44
1.13
56786896--56786952
27
2.2
26
79
14
64
57
0
3
38
1.16
56796072--56796128
29
2.0
29
96
0
105
36
8
12
42
1.74
56814471--56814496
9
2.9
9
100
0
52
30
0
46
23
1.53
56825465--56825518
27
2.0
27
100
0
108
40
22
7
29
1.81
56825467--56825525
27
2.2
27
93
0
100
42
20
8
28
1.81
56832865--56832902
3
13.0
3
83
5
51
31
0
2
65
1.06
56834066--56834106
18
2.2
19
86
4
57
73
2
21
2
1.07
56835908--56835955
24
2.0
25
84
8
64
35
0
4
60
1.16
56839563--56839658
49
2.0
48
81
4
113
48
2
10
38
1.49
56842790--56842888
23
4.3
23
90
0
153
32
25
20
22
1.98
56843114--56843152
18
2.2
17
86
13
53
46
20
0
33
1.51
56847202--56847226
12
2.1
12
100
0
50
52
8
0
40
1.31
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
56859044--56859084
21
2.0
21
90
0
64
29
21
29
19
1.98
56862325--56862383
28
2.1
28
83
0
73
69
1
0
28
0.98
56862325--56862365
14
2.9
14
77
22
50
75
2
0
21
0.92
56864739--56864780
12
3.6
11
87
6
57
78
0
4
16
0.91
56864856--56864896
15
2.7
15
84
0
55
78
0
4
17
0.93
56867370--56867396
13
2.1
13
100
0
54
14
7
22
55
1.64
56872566--56872609
15
3.0
14
80
9
52
72
2
2
22
1.07
56872576--56872617
17
2.4
18
88
4
59
73
4
0
21
1.01
56872795--56872859
3
21.7
3
80
0
67
61
1
6
30
1.29
56874710--56875145
49
8.7
49
68
7
252
25
22
23
29
1.99
56874588--56874806
121
1.8
122
83
1
296
23
21
26
29
1.99
56874710--56875145
100
4.4
100
92
1
696
25
22
23
29
1.99
56875155--56875292
45
3.1
45
81
6
181
23
26
22
27
2.00
56875150--56875284
44
3.0
45
81
6
193
22
25
25
26
2.00
56875400--56875439
15
2.7
15
96
0
71
35
0
20
45
1.51
56878002--56878029
14
2.0
14
100
0
56
35
28
7
28
1.84
56881297--56881338
21
2.0
21
86
9
59
47
4
14
33
1.65
56883386--56883558
44
4.1
41
75
11
150
24
21
24
28
1.99
56883549--56884020
131
3.6
131
91
0
764
26
24
18
29
1.98
56883661--56884015
44
8.1
44
70
10
174
27
25
18
28
1.98
56898727--56898860
64
2.1
64
90
0
205
29
11
17
42
1.83
56899830--56899884
5
10.8
5
83
11
67
81
1
3
12
0.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
56899836--56899886
26
2.0
26
88
7
77
80
1
5
11
0.97
56900617--56900697
40
2.0
40
97
0
153
45
13
12
28
1.80
56902628--56902680
26
2.0
26
85
0
70
56
16
5
20
1.60
56911767--56911810
18
2.4
19
85
11
65
50
0
0
50
1.00
56914022--56914048
6
4.5
6
100
0
54
66
0
0
33
0.92
56916178--56916470
44
6.5
44
72
12
175
29
20
19
30
1.97
56916120--56916510
182
2.2
182
88
0
586
29
20
19
29
1.97
56916216--56916660
44
9.9
44
72
10
229
29
20
18
31
1.97
56916689--56916943
90
2.9
89
73
10
211
27
22
19
31
1.98
56918548--56918715
25
6.7
25
93
0
282
22
23
17
36
1.95
56918548--56918791
50
5.1
50
83
8
287
21
23
17
37
1.94
56918548--56918769
75
3.1
75
87
5
309
21
23
17
37
1.94
56918727--56918795
22
3.1
22
83
8
95
17
24
17
40
1.90
56920091--56920211
48
2.6
47
85
6
147
26
15
27
30
1.96
56924057--56924403
88
4.0
88
88
1
491
27
22
19
30
1.98
56924057--56924403
175
2.0
176
87
0
507
27
22
19
30
1.98
56925518--56925598
42
1.9
42
92
0
135
27
29
14
28
1.95
56925787--56925819
14
2.3
15
89
5
50
24
33
15
27
1.95
56930521--56930624
17
5.8
17
66
26
54
42
10
10
36
1.74
56930516--56930633
19
6.4
19
70
21
83
40
9
10
39
1.71
56930514--56930574
32
1.9
32
93
6
106
39
9
8
42
1.68
56930550--56930633
21
4.2
22
76
14
78
39
9
10
40
1.73
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
56930575--56930632
17
3.3
17
86
9
89
43
10
12
34
1.76
56930636--56930680
19
2.2
21
88
7
67
33
8
6
51
1.59
56931309--56931348
16
2.5
16
87
0
53
5
15
2
77
1.04
56931423--56931476
6
8.5
6
80
11
54
0
18
0
81
0.69
56931429--56931476
9
5.0
9
80
14
60
0
18
0
81
0.70
56931433--56931492
21
2.7
22
84
5
68
0
26
0
73
0.84
56931427--56931503
27
2.9
26
84
3
82
0
27
0
72
0.85
56931610--56931695
15
5.6
14
72
20
50
2
33
0
63
1.07
56931616--56931653
18
2.2
17
86
13
51
2
31
0
65
1.06
56932202--56932263
29
2.1
29
82
5
72
45
6
19
29
1.75
56932239--56932368
29
4.4
29
82
7
138
40
3
23
32
1.73
56932724--56933789
76
14.1
73
84
8
1006
36
20
16
26
1.94
56934678--56934738
10
6.2
10
77
11
72
1
8
4
85
0.80
56945775--56945823
20
2.5
19
90
6
71
40
6
8
44
1.59
56945779--56945823
19
2.3
20
88
3
65
37
6
8
46
1.61
56945778--56945871
50
1.9
48
87
8
136
34
8
7
50
1.61
56945827--56945871
19
2.2
21
88
7
67
33
8
6
51
1.59
56946650--56946700
6
8.5
6
82
8
68
0
19
0
80
0.71
56946654--56946736
26
3.4
25
80
8
91
0
27
0
72
0.85
56946688--56946739
17
2.9
17
75
18
52
0
32
0
67
0.91
56946837--56946922
15
5.6
14
72
20
50
2
33
0
63
1.07
56946843--56946880
18
2.2
17
86
13
51
2
31
0
65
1.06
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
56947433--56947488
29
1.9
29
82
7
69
48
7
17
26
1.73
56947461--56947592
29
4.5
29
81
4
140
39
5
24
31
1.77
56953902--56953931
4
7.5
4
92
0
51
23
3
0
73
0.98
56953999--56954064
15
4.5
14
72
10
51
21
3
3
72
1.11
56956792--56956857
25
2.6
25
85
2
87
68
4
1
25
1.18
56958707--56958732
11
2.4
11
100
0
52
61
7
7
23
1.49
56959182--56959219
17
2.3
17
86
4
51
52
2
13
31
1.54
56959467--56959491
12
2.1
12
100
0
50
8
0
8
84
0.79
56960597--56960687
39
2.4
37
80
7
94
28
28
21
20
1.99
56961045--56961089
3
15.0
3
95
0
81
64
0
0
35
0.94
56961745--56961770
11
2.4
11
100
0
52
0
42
7
50
1.31
56967452--56967479
3
9.3
3
100
0
56
32
0
0
67
0.91
56968227--56968322
39
2.5
37
80
6
95
28
27
22
21
1.99
56969365--56969390
11
2.4
11
100
0
52
0
42
7
50
1.31
56969771--56969804
7
4.9
7
100
0
68
58
11
0
29
1.33
56969768--56969814
21
2.3
20
86
13
69
59
8
2
29
1.39
56984901--56984940
15
2.6
15
88
4
53
15
2
5
77
1.04
56985205--56986164
152
6.3
151
84
8
1187
51
6
9
31
1.61
56986521--56986571
25
2.0
26
88
3
77
39
1
1
56
1.22
56987054--56987103
21
2.4
22
80
10
59
60
6
0
34
1.21
56991214--56991248
15
2.2
16
90
5
54
17
8
17
57
1.64
56995331--56995366
18
1.9
19
88
5
56
41
8
0
50
1.33
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
57002908--57003000
48
2.0
46
87
8
134
53
18
9
18
1.70
57013351--57013382
16
2.0
16
93
0
55
0
34
15
50
1.45
57018814--57018858
20
2.3
19
92
3
72
26
2
6
64
1.30
57022202--57022231
8
3.8
8
95
0
51
10
0
50
40
1.36
57037537--57037906
44
8.6
43
73
8
227
30
20
22
27
1.98
57037536--57038004
214
2.2
214
83
4
478
30
20
23
26
1.98
57042199--57042236
17
2.2
17
86
9
51
60
0
7
31
1.25
57042371--57042401
3
10.3
3
92
0
53
64
0
3
32
1.09
57043912--57044101
44
4.3
44
79
7
206
30
21
14
33
1.94
57044115--57044570
44
10.4
44
65
17
171
28
24
19
28
1.98

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204