Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: D12
Parameters: 2 7 7 80 10 50 1000
Length:  63843421

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   

This is table  209  of  214  ( 25680 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61510382--61510469
21
4.0
23
82
10
96
34
25
22
18
1.96
61511779--61511830
17
3.2
17
84
10
74
57
1
0
40
1.10
61511780--61511820
14
2.9
14
92
0
73
56
2
0
41
1.13
61513972--61514153
51
3.6
51
93
0
310
29
22
14
34
1.93
61524981--61525015
18
1.9
18
94
0
61
28
5
0
65
1.15
61524962--61525008
24
1.9
25
91
4
78
27
4
0
68
1.08
61528871--61528925
24
2.3
23
79
11
58
69
20
3
7
1.28
61548923--61549002
41
1.9
42
92
2
135
35
1
0
63
1.02
61548973--61548997
13
1.9
13
100
0
50
16
0
0
84
0.63
61565758--61565782
6
4.2
6
100
0
50
32
0
0
68
0.90
61573404--61573428
7
3.6
7
100
0
50
28
0
0
72
0.86
61575808--61575865
30
1.9
30
86
6
82
46
1
6
44
1.40
61589202--61589246
21
2.2
20
88
4
63
11
6
8
73
1.25
61589202--61589246
10
4.4
10
80
5
54
11
6
8
73
1.25
61594295--61594345
15
3.5
15
81
13
70
29
9
0
60
1.28
61596392--61596574
61
3.0
62
91
1
305
40
20
4
33
1.74
61597811--61597863
11
4.6
11
80
15
54
79
13
3
3
1.01
61598648--61598841
106
1.8
107
82
6
241
23
17
11
47
1.80
61599300--61599691
44
8.9
44
79
3
378
27
16
26
29
1.97
61599297--61599668
132
2.8
132
96
1
674
27
16
26
29
1.97
61599753--61601280
46
33.7
46
63
15
389
27
20
22
29
1.98
61600128--61600324
45
4.4
45
64
13
118
27
18
23
29
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61600074--61600482
88
4.6
91
66
10
225
27
20
22
30
1.98
61599646--61601280
134
12.0
134
88
5
2374
27
20
22
29
1.98
61600496--61600878
95
4.0
95
98
0
723
30
20
21
27
1.98
61600575--61600832
50
5.4
50
66
19
188
30
19
22
26
1.98
61600625--61600866
45
5.2
44
65
20
141
28
20
22
28
1.99
61599646--61601565
686
2.8
687
91
3
3005
28
20
22
28
1.98
61601182--61601662
95
5.0
95
97
0
881
29
20
22
27
1.98
61601261--61601518
50
5.4
50
65
19
179
30
20
22
26
1.98
61601467--61602134
233
2.9
231
95
1
1214
28
19
22
29
1.98
61601698--61601895
97
2.0
97
97
0
369
30
17
22
29
1.97
61601911--61602142
95
2.6
88
81
10
286
28
20
21
28
1.98
61601931--61602124
95
2.0
95
95
0
352
29
19
22
28
1.98
61602114--61602297
44
4.2
44
66
5
104
30
19
24
26
1.98
61602029--61602383
130
2.7
130
90
0
530
28
20
24
27
1.99
61603978--61604028
15
3.5
15
81
13
70
29
9
0
60
1.28
61605594--61605621
12
2.3
12
100
0
56
25
32
28
14
1.94
61607288--61607317
12
2.4
12
94
5
51
0
23
3
73
0.98
61607287--61607361
22
3.3
21
71
12
60
0
18
8
73
1.07
61610241--61610375
39
3.5
36
72
13
92
22
20
27
29
1.98
61615779--61616421
320
2.0
320
99
0
1277
32
16
16
34
1.92
61632726--61632820
31
3.2
30
71
17
81
25
10
13
50
1.73
61633719--61633812
48
2.0
48
87
8
138
18
13
27
40
1.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61641365--61641419
11
5.3
11
75
16
55
54
0
0
45
0.99
61642380--61642416
12
3.2
12
88
7
58
45
0
0
54
1.00
61642380--61642415
11
3.2
11
92
4
54
47
0
0
52
1.00
61644005--61644064
29
2.1
29
81
3
68
26
16
5
51
1.65
61653988--61654046
25
2.4
24
80
5
64
47
3
1
47
1.29
61681410--61681510
48
2.1
48
90
0
157
49
8
7
33
1.63
61685567--61685867
46
6.6
45
93
2
460
33
15
21
29
1.94
61685567--61685867
92
3.3
92
93
1
509
33
15
21
29
1.94
61695678--61695729
26
2.0
26
88
0
77
42
1
11
44
1.51
61705494--61705518
12
2.1
12
100
0
50
52
8
32
8
1.60
61713486--61713510
13
1.9
13
100
0
50
32
0
16
52
1.44
61715857--61715897
18
2.2
19
86
4
57
7
63
7
21
1.45
61723516--61723545
15
2.0
15
93
0
51
33
16
0
50
1.46
61725739--61725823
41
2.1
41
100
0
170
44
11
7
36
1.68
61738882--61739082
97
2.1
98
97
2
379
25
14
9
50
1.74
61754051--61754225
95
1.8
95
89
4
273
40
14
10
34
1.81
61755133--61755193
31
2.0
31
96
3
115
34
29
3
32
1.74
61758937--61758962
5
5.2
5
100
0
52
80
0
19
0
0.71
61759946--61760008
17
3.5
17
71
12
63
49
14
3
33
1.59
61759940--61760011
37
1.9
37
97
0
135
47
16
2
33
1.61
61760143--61760251
39
2.8
39
97
1
202
17
2
28
51
1.59
61760153--61760234
38
2.3
33
84
14
94
18
2
26
52
1.58
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61774143--61774179
19
1.9
19
94
0
65
32
16
0
51
1.45
61774157--61774253
51
1.9
51
85
8
135
32
15
5
46
1.68
61777653--61777711
27
2.1
28
81
3
66
45
20
5
28
1.72
61781660--61781685
11
2.4
11
100
0
52
38
0
0
61
0.96
61781669--61781706
19
1.9
19
89
5
58
36
0
0
63
0.95
61781672--61781714
20
2.2
19
83
4
50
37
0
2
60
1.10
61788785--61788831
21
2.2
22
92
3
78
21
19
38
21
1.94
61794278--61794368
11
9.0
11
67
26
58
40
2
0
57
1.11
61794269--61794342
30
2.4
31
93
4
132
36
2
0
60
1.11
61794300--61794386
39
2.1
42
89
10
137
36
1
0
62
1.03
61808955--61808979
12
2.1
12
100
0
50
52
0
16
32
1.44
61812518--61812572
27
2.0
27
96
0
101
30
18
14
36
1.91
61821695--61821730
15
2.4
15
100
0
72
25
13
19
41
1.88
61823304--61823361
29
2.0
30
89
3
91
41
5
27
25
1.76
61823307--61823370
29
2.2
29
83
5
85
45
4
25
25
1.72
61827649--61827692
21
2.3
18
84
11
52
54
0
2
43
1.12
61831508--61831664
37
4.0
37
82
14
199
26
21
15
36
1.93
61831581--61831947
46
7.6
46
86
7
437
29
22
14
34
1.93
61831624--61831941
52
6.3
52
86
7
417
28
22
13
34
1.93
61831581--61831933
196
1.8
196
92
0
598
28
22
14
34
1.93
61831581--61831947
98
3.7
97
84
9
492
29
22
14
34
1.93
61834900--61834925
11
2.4
11
100
0
52
50
7
42
0
1.31
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61835586--61835621
6
6.0
6
86
0
54
36
0
11
52
1.37
61835588--61835635
12
4.0
12
86
0
60
33
0
6
60
1.22
61835588--61835635
6
8.0
6
85
0
51
33
0
6
60
1.22
61835586--61835634
18
2.7
18
90
0
71
34
0
8
57
1.29
61835776--61835847
24
2.9
24
78
15
67
44
0
22
33
1.53
61835991--61836086
39
2.5
39
80
6
108
20
23
28
27
1.99
61837277--61837327
27
1.9
26
92
4
84
35
0
1
62
1.06
61837367--61837422
25
2.3
24
79
11
69
39
0
7
53
1.28
61837445--61837474
9
3.4
9
90
9
53
36
0
0
63
0.95
61838456--61838508
25
2.1
25
96
0
97
22
20
22
33
1.97
61840595--61840660
34
1.9
34
87
0
96
45
16
0
37
1.48
61840604--61840716
34
3.3
33
78
7
102
48
20
0
30
1.50
61843909--61844071
79
2.0
80
90
1
256
24
10
31
33
1.89
61848255--61848328
29
2.6
29
78
2
87
48
9
10
31
1.70
61855847--61855897
18
2.8
19
77
16
56
64
5
0
29
1.17
61858518--61858561
22
2.0
21
82
4
52
61
9
2
27
1.38
61858885--61858935
25
2.0
25
88
7
75
52
1
3
41
1.31
61860047--61860079
15
2.1
16
88
5
50
42
3
0
54
1.15
61865767--61865795
14
2.0
15
93
6
51
55
0
3
41
1.17
61866940--61867019
39
2.2
33
78
12
88
57
3
2
36
1.30
61871648--61871687
19
2.0
19
85
9
53
50
0
0
50
1.00
61874245--61874297
25
2.2
24
86
10
72
30
1
13
54
1.49
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61878558--61878622
32
2.0
32
100
0
130
36
12
12
38
1.80
61887856--61887880
10
2.5
10
100
0
50
36
20
32
12
1.89
61907071--61907147
31
2.5
31
91
2
129
51
6
10
31
1.61
61907071--61907161
31
3.0
31
87
4
114
48
6
9
35
1.63
61907749--61907792
11
4.0
11
82
17
56
40
2
0
56
1.11
61907747--61907793
22
2.2
22
88
11
71
38
2
0
59
1.09
61909402--61909453
24
2.2
24
89
0
77
55
9
1
32
1.43
61911372--61911423
24
2.2
24
89
0
77
55
9
1
32
1.43
61913129--61913166
20
1.9
20
89
10
60
10
0
5
84
0.77
61916593--61916653
32
1.9
33
83
9
83
40
14
14
29
1.86

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214