Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: D07
Parameters: 2 7 7 80 10 50 1000
Length:  58101237

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   

This is table  175  of  199  ( 23844 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51104837--51104875
9
4.3
9
87
12
62
35
0
0
64
0.94
51104893--51104934
18
2.4
18
81
14
52
23
0
2
73
0.94
51110391--51110426
16
2.3
15
86
9
54
36
0
0
63
0.94
51112361--51112408
21
2.4
20
75
6
53
37
4
10
47
1.57
51117065--51117135
36
2.0
36
100
0
142
45
7
2
45
1.45
51118859--51118906
10
5.2
9
78
11
53
81
0
6
12
0.87
51118859--51118906
19
2.6
18
81
12
62
81
0
6
12
0.87
51119731--51120062
44
7.6
45
68
12
224
28
24
17
29
1.97
51119600--51120569
132
7.4
132
90
2
1337
29
23
17
29
1.97
51119639--51120569
263
3.5
263
91
1
1402
29
23
17
29
1.97
51119639--51120569
395
2.4
395
88
2
1352
29
23
17
29
1.97
51120548--51120812
44
6.0
44
73
4
228
29
24
16
28
1.97
51120586--51120821
89
2.7
89
80
5
296
29
24
18
27
1.98
51123143--51123182
18
2.2
18
91
8
64
65
5
15
15
1.44
51128984--51129026
21
2.0
21
95
0
77
27
0
37
34
1.57
51129007--51129039
16
2.1
16
94
0
57
33
0
36
30
1.58
51129018--51129112
45
2.1
44
88
1
136
34
5
27
32
1.79
51129274--51129308
18
2.0
17
88
5
52
54
0
0
45
0.99
51129232--51129304
27
2.7
27
76
8
76
52
2
0
45
1.15
51129193--51129464
144
1.9
147
92
3
469
46
2
3
46
1.35
51129418--51129452
18
2.0
17
88
5
52
54
0
0
45
0.99
51132358--51132407
20
2.6
17
77
22
55
54
2
0
44
1.11
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51132564--51132647
42
2.0
42
100
0
168
35
14
16
33
1.89
51133361--51133458
49
2.0
50
84
8
128
31
5
6
57
1.45
51136306--51136337
17
2.0
17
88
11
50
43
0
0
56
0.99
51138653--51138686
18
2.0
17
88
11
52
67
0
5
26
1.13
51138653--51138687
17
2.0
18
88
5
54
68
0
5
25
1.11
51140965--51140995
15
2.1
15
93
0
53
25
9
25
38
1.86
51142251--51142415
74
2.2
74
91
2
260
44
21
6
27
1.76
51143445--51143477
15
2.1
16
94
5
59
42
9
0
48
1.35
51146657--51146724
13
5.2
13
77
11
68
10
5
8
75
1.20
51146664--51146738
19
3.9
19
81
8
98
10
6
8
74
1.21
51146657--51146741
40
2.1
40
95
0
152
10
5
9
74
1.22
51146668--51146741
9
7.7
9
72
24
62
10
5
9
74
1.21
51149577--51149704
41
3.1
41
89
0
193
22
20
21
35
1.96
51149958--51149996
15
2.5
16
87
4
53
25
2
2
69
1.14
51150602--51150726
61
2.0
62
95
1
225
23
11
9
56
1.64
51154159--51154213
3
19.3
3
81
10
71
36
0
0
63
0.95
51154286--51154345
11
5.6
11
76
9
54
36
1
3
58
1.25
51155941--51155981
3
13.7
3
100
0
82
31
0
0
68
0.90
51156520--51156567
20
2.5
20
83
10
64
27
18
10
43
1.82
51158810--51158868
31
1.9
31
86
13
86
83
0
11
5
0.81
51159393--51159428
15
2.5
15
86
4
56
72
0
13
13
1.13
51159396--51159436
7
5.7
7
88
11
57
73
0
14
12
1.11
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51159396--51159445
22
2.3
21
87
12
75
72
0
14
14
1.14
51160702--51160983
132
2.1
132
91
0
447
29
18
24
27
1.98
51160778--51160983
44
4.7
44
68
11
134
30
17
24
27
1.97
51160980--51161201
43
5.0
43
65
7
131
28
24
24
22
1.99
51160768--51161026
132
2.0
132
82
3
317
28
20
23
27
1.99
51160939--51161244
88
3.5
89
80
4
404
28
23
24
23
1.99
51161247--51161425
87
2.1
87
92
0
295
30
22
22
24
1.99
51161261--51161394
43
3.1
42
64
6
106
30
20
23
26
1.98
51161661--51162155
43
11.7
43
71
9
313
27
20
24
28
1.99
51161622--51162069
83
5.4
85
72
12
322
26
21
24
28
1.99
51161598--51162198
126
4.8
126
92
1
954
27
21
24
27
1.99
51163463--51163541
3
27.3
3
84
7
110
34
0
1
64
1.02
51176659--51176742
33
2.5
33
92
0
132
32
27
11
28
1.92
51181414--51181528
33
3.5
33
90
0
176
33
26
8
32
1.87
51182765--51182804
15
2.7
15
80
0
53
57
0
0
42
0.98
51182969--51183006
20
1.9
20
84
10
51
2
13
2
81
0.90
51183349--51183390
21
2.0
21
85
0
57
4
14
0
80
0.86
51183356--51183396
11
3.7
11
87
9
57
0
19
0
80
0.71
51183384--51183415
3
11.0
3
93
6
57
0
31
0
68
0.90
51183749--51183923
30
5.9
30
75
7
117
38
4
21
36
1.72
51184061--51185763
76
22.3
75
78
6
1453
33
21
16
29
1.95
51184061--51213873
152
194.4
152
73
9
15206
33
20
16
29
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51184061--51213857
228
129.5
226
75
8
21406
33
20
16
29
1.95
51185740--51185800
32
1.9
32
96
0
113
19
31
14
34
1.92
51185577--51185910
185
1.8
184
88
1
508
32
22
15
29
1.95
51185772--51186943
76
15.3
76
77
5
840
33
20
16
29
1.95
51186920--51186980
32
1.9
32
96
0
113
19
31
14
34
1.92
51186757--51187126
185
2.0
184
85
1
499
31
23
16
29
1.96
51186952--51188124
76
15.3
76
76
5
806
33
20
16
29
1.95
51188101--51188161
32
1.9
32
96
0
113
19
31
14
34
1.92
51187938--51188307
185
2.0
184
86
1
508
31
23
16
28
1.96
51188133--51189377
76
16.3
76
76
5
1010
33
21
16
29
1.95
51189278--51189485
108
1.9
108
83
3
267
28
25
16
29
1.97
51189386--51202736
76
175.5
75
75
8
8557
33
20
16
29
1.95
51198205--51198559
185
1.9
186
83
2
455
33
19
16
30
1.94
51202753--51213873
76
145.4
75
75
7
7823
33
20
17
29
1.95
51202580--51202921
185
1.8
187
79
3
395
33
19
16
30
1.94
51222403--51222464
28
2.2
28
88
0
88
3
29
40
27
1.72
51223073--51223248
30
5.8
30
76
6
158
40
3
17
38
1.67
51223073--51223194
63
2.0
62
88
1
181
37
3
18
40
1.67
51229073--51229126
21
2.6
21
82
5
74
29
25
22
22
1.99
51231933--51232068
47
2.7
51
77
14
138
30
14
25
30
1.95
51238832--51238880
16
2.9
17
69
6
55
40
2
10
46
1.49
51238988--51239095
53
2.0
53
85
7
148
26
12
25
34
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51239062--51239241
46
3.8
47
83
5
204
26
13
27
32
1.94
51239062--51239241
93
1.9
94
82
8
224
26
13
27
32
1.94
51258227--51258269
22
1.9
22
85
4
59
65
2
0
32
1.06
51260155--51260280
41
3.1
40
82
4
155
25
22
21
30
1.98
51260156--51260281
40
3.1
40
84
1
162
24
23
21
30
1.99
51260528--51260565
15
2.5
15
91
0
58
26
2
2
68
1.16
51263477--51263506
15
2.0
15
100
0
60
33
13
33
20
1.91
51263617--51263684
8
8.8
8
74
6
50
70
13
4
11
1.30
51263647--51263677
12
2.6
12
89
0
53
74
19
0
6
1.03
51265490--51265640
40
3.7
40
84
10
216
24
21
25
28
1.99
51265490--51265641
82
1.9
82
95
0
277
24
21
25
28
1.99
51265709--51266227
50
10.3
50
68
4
227
25
21
22
30
1.99
51265799--51265953
52
3.0
52
67
2
143
26
19
20
33
1.96
51266509--51266565
24
2.4
24
84
0
78
31
22
10
35
1.88
51267924--51267972
7
6.9
7
82
13
55
4
2
10
83
0.85
51267924--51267966
15
2.9
15
82
0
59
4
2
9
83
0.87
51267933--51267974
22
1.9
22
90
9
68
4
4
7
83
0.91
51267934--51267988
28
2.0
28
82
7
67
5
7
7
80
1.04
51271308--51271576
126
2.1
127
87
4
384
28
16
18
36
1.92
51271638--51271741
34
3.1
33
80
5
127
42
15
1
40
1.58
51272624--51272698
37
2.0
37
100
0
150
29
2
18
49
1.61
51273342--51273576
123
1.9
123
88
3
357
29
24
17
28
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51273459--51273867
144
2.8
144
82
2
480
27
26
17
27
1.98
51274064--51274108
21
2.1
21
92
8
74
11
8
11
68
1.39
51274064--51274108
11
4.3
10
89
10
72
11
8
11
68
1.39
51278471--51278531
20
2.8
21
78
16
63
63
4
3
27
1.30
51281413--51281456
21
2.1
21
100
0
88
47
29
9
13
1.74
51285300--51285339
21
2.0
21
85
5
55
42
0
12
45
1.42
51287381--51287496
41
2.8
41
80
5
135
33
20
19
25
1.97
51287618--51287648
16
2.0
15
93
6
53
6
19
6
67
1.35
51290850--51290899
25
2.0
26
92
4
84
50
4
2
44
1.32
51300111--51300304
43
4.5
44
77
8
193
34
23
14
27
1.94

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199