Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite: G. Benson, "Tandem repeats finder: a program to analyze DNA sequences" Nucleic Acid Research(1999) Vol. 27, No. 2, pp. 573-580. Sequence: Gbar_D05 Parameters: 2 7 7 80 10 50 1000 Length: 63323194

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   

This is table  170  of  199  ( 23841 repeats found )
Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55058171--55058240
28
2.4
28
86
9
88
35
0
1
62
1.04
55058196--55058251
27
2.0
28
86
3
78
32
0
3
64
1.11
55060694--55060718
11
2.3
11
100
0
50
84
0
0
16
0.63
55061656--55061680
11
2.3
11
100
0
50
24
20
0
56
1.43
55066335--55066438
45
2.3
45
94
0
181
41
23
0
34
1.61
55067322--55067371
25
2.0
24
85
11
66
24
0
8
68
1.16
55071991--55072076
42
2.0
42
93
0
145
19
12
33
33
1.90
55072687--55072718
12
2.6
12
95
5
55
25
6
3
65
1.31
55074356--55074387
12
2.6
12
95
5
55
65
3
6
25
1.31
55075849--55075910
27
2.3
27
88
0
97
29
22
11
37
1.89
55084940--55085075
26
5.1
26
74
9
103
41
0
2
55
1.17
55084952--55085075
41
3.0
41
73
18
98
41
0
2
54
1.19
55085002--55085067
18
3.6
17
72
21
53
39
1
4
54
1.30
55085211--55085316
44
2.5
41
79
18
135
34
32
3
29
1.75
55085224--55085316
44
2.1
46
93
4
163
36
31
4
27
1.76
55085298--55085328
16
1.9
16
100
0
62
19
35
6
38
1.77
55087274--55087358
30
2.7
30
73
12
82
38
0
2
58
1.11
55090079--55090161
41
2.0
41
92
0
139
43
6
22
27
1.77
55094688--55094728
3
13.7
3
100
0
82
68
0
0
31
0.90
55099811--55099842
13
2.5
13
100
0
64
53
9
18
18
1.71
55100372--55100885
162
3.2
162
92
0
848
26
20
17
35
1.95
55101756--55101806
21
2.5
21
82
17
63
76
3
7
11
1.13
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55108531--55109118
290
2.0
297
95
4
1079
40
17
16
26
1.90
55114026--55114109
41
2.0
41
100
0
168
33
22
11
32
1.91
55120734--55121957
661
1.9
658
80
6
1456
35
15
16
31
1.91
55122453--55122502
27
1.9
27
88
8
77
58
6
0
36
1.23
55122545--55122623
26
3.0
26
100
0
158
68
3
7
20
1.30
55122720--55122794
3
24.3
3
74
15
64
58
2
6
32
1.38
55124302--55124359
28
2.1
27
84
6
73
51
1
8
37
1.43
55124368--55124454
46
1.9
45
81
9
106
43
4
14
36
1.67
55124535--55124581
23
2.0
25
83
8
62
53
2
8
36
1.44
55124632--55124665
3
11.3
3
87
0
50
61
0
5
32
1.20
55128760--55128818
20
3.0
20
75
9
75
38
3
3
54
1.34
55128760--55128843
40
2.1
40
84
8
109
41
2
4
51
1.36
55132252--55132301
25
2.0
25
88
7
75
56
10
32
2
1.44
55134337--55134379
17
2.4
18
84
7
61
23
0
6
69
1.12
55135804--55135845
21
1.9
22
85
9
59
42
2
0
54
1.13
55135898--55135946
24
2.1
23
85
14
66
38
8
4
48
1.52
55136538--55136583
17
2.8
17
80
12
51
60
4
6
28
1.40
55138815--55138888
24
3.1
24
73
7
69
24
10
9
55
1.64
55138814--55138888
25
3.1
25
69
7
64
24
10
9
56
1.63
55140929--55140969
21
2.0
21
95
4
75
31
4
0
63
1.15
55140889--55140974
31
2.7
31
75
18
97
31
3
0
65
1.10
55142115--55142245
62
2.1
63
79
13
146
62
6
6
23
1.45
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55142432--55142470
16
2.4
17
82
8
53
51
0
10
38
1.36
55142503--55142538
18
2.1
16
90
10
54
61
0
5
33
1.19
55142686--55142722
15
2.5
15
90
0
56
67
0
0
32
0.91
55142683--55142721
12
3.3
12
89
10
55
66
0
0
33
0.92
55142690--55142727
12
3.2
12
89
10
53
65
0
0
34
0.93
55143980--55144028
8
6.4
8
84
15
68
24
51
12
12
1.73
55143974--55144023
22
2.3
22
86
6
66
24
54
10
12
1.67
55144197--55144264
17
3.8
17
74
11
73
25
5
14
54
1.62
55145947--55145998
21
2.5
22
93
6
90
40
23
1
34
1.66
55147807--55148151
165
2.1
162
87
1
510
27
20
16
36
1.94
55149855--55149895
21
2.0
21
90
0
64
21
34
7
36
1.82
55159909--55159959
3
17.7
3
92
8
88
66
0
0
33
0.92
55161076--55161111
18
1.9
18
88
5
54
50
8
0
41
1.33
55161187--55161211
11
2.3
11
100
0
50
64
0
0
36
0.94
55164858--55164914
25
2.4
24
77
13
57
26
0
8
64
1.22
55165877--55165930
20
2.7
19
83
11
63
27
12
22
37
1.91
55173269--55173317
25
2.1
23
85
11
64
34
10
4
51
1.55
55173592--55173642
18
2.8
18
73
8
50
27
0
7
64
1.21
55176319--55176349
16
1.9
16
93
0
53
58
6
6
29
1.48
55179499--55179572
24
3.1
24
73
7
69
24
10
9
55
1.64
55179498--55179572
25
3.1
25
69
7
64
24
10
9
56
1.63
55180697--55180730
16
2.1
16
88
0
50
50
14
17
17
1.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55183525--55183565
21
2.0
21
90
0
64
29
21
29
19
1.98
55185469--55185502
16
2.1
16
88
0
50
50
14
17
17
1.79
55190744--55191090
162
2.1
162
94
0
604
25
21
17
35
1.95
55191732--55191774
21
2.0
22
81
4
52
74
4
4
16
1.16
55195989--55196038
16
3.2
16
75
8
50
32
6
2
60
1.32
55197497--55197554
29
1.9
31
83
13
77
63
5
0
31
1.16
55200931--55201012
10
8.1
10
78
17
57
65
4
2
26
1.25
55202227--55202829
45
13.6
44
78
7
476
29
18
16
34
1.94
55202238--55202829
89
6.6
90
78
9
547
30
18
16
34
1.93
55212534--55212569
18
2.1
18
89
5
56
52
0
0
47
1.00
55216614--55216690
37
2.1
37
85
9
104
35
9
2
53
1.47
55219521--55219624
41
2.5
41
100
0
208
46
7
19
26
1.77
55219547--55219615
23
3.2
23
63
32
62
46
7
18
27
1.75
55224783--55224819
17
2.1
18
90
5
58
45
16
5
32
1.70
55233067--55233112
22
2.0
22
83
8
56
43
0
0
56
0.99
55235845--55235918
24
3.1
24
73
7
69
24
10
9
55
1.64
55235844--55235918
25
3.1
25
69
7
64
24
10
9
56
1.63
55237044--55237077
16
2.1
16
88
0
50
50
14
17
17
1.79
55239451--55239495
23
1.9
24
82
13
58
57
4
8
28
1.48
55239544--55239568
13
1.9
13
100
0
50
64
0
0
36
0.94
55239634--55239717
4
21.5
4
74
13
52
69
4
3
22
1.23
55239658--55239719
26
2.4
26
76
13
65
69
4
4
20
1.26
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55239700--55239742
16
2.5
17
85
11
61
72
2
2
23
1.08
55241225--55241275
14
3.6
14
79
7
59
17
9
1
70
1.24
55242930--55243621
44
15.6
44
81
4
638
29
19
17
33
1.95
55242948--55243622
89
7.6
89
83
4
668
29
19
17
33
1.95
55245424--55245480
28
2.0
28
93
0
96
47
19
10
22
1.80
55246539--55246566
12
2.3
12
100
0
56
46
17
7
28
1.75
55252419--55252480
31
2.0
31
87
3
90
29
9
8
53
1.62
55252743--55252805
25
2.4
25
82
15
83
58
3
1
36
1.23
55258352--55258692
165
2.1
165
96
0
619
27
19
17
35
1.94
55262381--55262430
15
3.3
15
86
5
55
34
6
0
60
1.21
55262381--55262430
16
3.2
16
88
2
57
34
6
0
60
1.21
55264081--55264120
19
2.0
20
86
13
57
55
2
0
42
1.13
55267650--55267674
2
12.5
2
100
0
50
52
0
0
48
1.00
55269368--55269846
162
3.0
162
84
1
581
29
17
16
35
1.93
55270652--55270699
21
2.3
21
85
0
60
33
18
43
4
1.69
55271109--55271201
42
2.2
42
86
1
123
27
18
22
31
1.97
55271122--55271393
43
6.3
43
84
3
266
26
21
20
31
1.98
55271464--55271507
21
2.1
21
86
0
61
47
25
13
13
1.79
55274005--55274038
17
2.0
17
94
0
59
44
50
0
5
1.26
55278644--55278677
17
2.0
17
94
0
59
44
50
0
5
1.26
55279119--55279201
41
2.0
41
97
0
157
45
6
20
27
1.74
55280946--55280980
19
1.9
17
88
11
52
45
0
0
54
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55285014--55285053
19
2.0
20
86
13
57
55
2
0
42
1.13
55288202--55288710
162
3.1
162
95
0
919
25
20
17
35
1.95
55291270--55291330
27
2.3
27
97
0
113
29
26
9
34
1.88
55294749--55294796
19
2.6
17
76
20
51
72
2
2
22
1.05
55295729--55295779
19
2.7
18
79
11
57
31
11
23
33
1.91
55296049--55296085
17
2.1
18
90
5
58
45
16
5
32
1.70
55299877--55299927
25
2.2
23
89
10
77
39
7
3
49
1.51
55299932--55299969
9
4.3
9
90
6
51
39
0
0
60
0.97
55300165--55300228
28
2.3
28
81
7
76
45
0
0
54
0.99
55300075--55300272
107
1.8
109
81
10
246
40
1
2
56
1.17

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199