Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite: G. Benson, "Tandem repeats finder: a program to analyze DNA sequences" Nucleic Acid Research(1999) Vol. 27, No. 2, pp. 573-580. Sequence: Gbar_D10 Parameters: 2 7 7 80 10 50 1000 Length: 65706892

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   

This is table  197  of  218  ( 26060 repeats found )
Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58276461--58276494
16
2.1
16
88
0
50
41
2
2
52
1.31
58304141--58304206
31
2.3
27
75
14
69
48
13
3
34
1.58
58305932--58305965
6
5.7
6
100
0
68
0
35
14
50
1.44
58305932--58305971
18
2.2
18
90
0
62
2
37
12
47
1.55
58315329--58315382
25
2.1
25
82
3
63
27
0
5
66
1.13
58316882--58316925
23
1.9
23
90
0
70
40
2
2
54
1.25
58318324--58318357
17
2.0
17
88
0
50
41
0
0
58
0.98
58318844--58318873
16
1.9
15
93
6
51
40
0
0
60
0.97
58335401--58335437
17
2.3
17
86
9
51
10
0
10
78
0.97
58338151--58338214
22
2.9
22
80
13
78
65
9
7
17
1.44
58346239--58346334
49
2.0
49
97
0
183
25
23
18
32
1.97
58355014--58355227
106
2.0
106
97
0
401
24
34
12
28
1.92
58356513--58356559
9
5.2
9
86
0
58
40
23
8
27
1.83
58359818--58359903
27
3.2
27
88
1
111
31
23
26
18
1.97
58359978--58360053
19
4.1
18
81
5
89
36
9
0
53
1.33
58359983--58360053
37
1.9
37
97
0
133
39
9
0
50
1.36
58360270--58360339
19
3.7
19
78
3
88
38
8
0
52
1.32
58360287--58360345
18
3.2
18
76
4
73
42
6
0
50
1.28
58360275--58360345
37
1.9
37
100
0
142
42
8
0
49
1.33
58360608--58360678
37
1.9
37
97
0
133
49
0
9
40
1.36
58360614--58360682
19
3.7
19
82
5
97
52
0
10
37
1.36
58360757--58360837
27
3.0
27
83
5
94
18
27
22
32
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58360865--58360894
12
2.6
11
90
10
51
0
0
20
80
0.72
58360895--58360939
22
2.0
22
95
0
81
57
0
8
33
1.30
58361193--58361256
30
2.1
30
85
0
83
67
3
7
21
1.31
58362286--58362324
20
2.0
20
89
0
60
61
0
0
38
0.96
58363070--58363100
2
15.5
2
100
0
62
51
0
0
48
1.00
58363805--58364039
42
5.6
43
77
5
203
31
17
16
35
1.92
58363815--58364032
84
2.6
85
80
5
237
30
17
15
36
1.91
58379314--58379432
23
5.2
23
87
0
175
29
25
22
22
1.99
58379318--58379430
46
2.5
46
95
0
199
29
26
23
21
1.99
58380780--58380887
41
2.8
40
87
5
141
25
18
21
34
1.96
58382448--58382495
23
2.1
23
84
0
60
25
27
16
31
1.97
58385211--58385326
45
2.6
45
81
0
133
44
16
18
20
1.86
58385345--58385414
22
3.1
22
67
18
63
52
10
14
22
1.71
58385308--58385469
45
3.6
45
86
3
209
47
12
17
22
1.81
58390114--58390146
14
2.3
15
89
5
50
21
9
18
51
1.73
58411142--58411198
5
11.6
5
81
10
73
61
1
0
36
1.07
58412453--58412486
16
2.1
16
88
0
50
67
2
14
14
1.34
58414811--58414870
25
2.4
25
91
2
95
20
0
23
56
1.42
58416633--58416824
63
3.0
63
96
0
357
32
14
22
30
1.93
58429690--58429727
18
2.1
19
90
5
60
52
5
21
21
1.66
58435692--58435829
72
1.9
72
87
0
204
30
16
14
38
1.89
58436107--58436149
17
2.4
19
85
11
56
41
2
0
55
1.12
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58437586--58437640
22
2.5
22
84
0
74
65
25
1
7
1.28
58437586--58437640
11
5.0
11
72
0
56
65
25
1
7
1.28
58440027--58440053
4
6.8
4
100
0
54
77
0
0
22
0.76
58440231--58440370
32
4.5
32
76
14
141
45
11
19
24
1.83
58440176--58440370
92
2.1
92
85
3
268
43
13
20
22
1.87
58452085--58452124
20
2.0
20
100
0
80
30
25
15
30
1.95
58462905--58462944
20
2.0
20
95
0
71
30
22
15
32
1.94
58470990--58471437
44
10.1
45
71
4
219
29
16
24
29
1.97
58471026--58471446
89
4.8
89
74
3
303
28
16
23
30
1.97
58470971--58471375
177
2.3
177
86
2
553
30
16
23
29
1.96
58471289--58471465
89
2.0
89
88
0
264
31
16
23
28
1.96
58470971--58471481
133
3.8
132
75
4
411
29
16
23
29
1.97
58471299--58471507
89
2.3
88
82
4
249
29
17
24
28
1.98
58471140--58471553
222
1.9
221
92
0
693
30
16
23
28
1.96
58471140--58471615
222
2.1
222
86
2
627
30
17
23
28
1.97
58471551--58471778
125
1.8
125
90
1
368
28
19
25
27
1.99
58474520--58474596
27
2.9
27
88
0
109
20
28
25
24
1.99
58474686--58474732
18
2.9
17
78
18
55
70
0
23
6
1.10
58474724--58474770
23
2.0
23
100
0
94
40
0
8
51
1.33
58478819--58478852
3
11.7
3
87
6
52
0
29
0
70
0.87
58478997--58479055
31
1.9
31
85
0
82
16
35
28
18
1.93
58495546--58495604
22
2.7
22
86
0
73
74
6
6
11
1.21
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58496047--58496217
91
1.9
91
84
4
229
33
7
14
44
1.73
58498740--58498797
28
2.1
27
93
3
98
1
12
8
77
1.06
58498740--58498804
28
2.4
28
87
7
89
1
12
9
76
1.07
58499333--58499394
31
2.0
31
96
0
115
41
16
11
30
1.83
58499780--58500118
186
1.8
184
86
3
493
43
6
23
26
1.78
58501777--58501816
18
2.1
20
90
9
66
47
0
0
52
1.00
58504033--58504067
18
2.0
18
88
5
54
37
5
0
57
1.23
58504001--58504092
29
3.1
28
81
9
103
36
4
0
58
1.18
58503972--58504048
39
2.0
40
84
2
102
33
3
0
62
1.14
58509847--58509923
39
2.0
39
94
0
136
35
27
16
20
1.95
58514736--58514780
21
2.1
21
83
0
54
33
35
8
22
1.85
58514879--58514927
14
3.5
14
77
0
62
24
18
28
28
1.98
58514866--58514926
7
8.7
7
75
0
50
29
18
27
24
1.98
58522560--58522733
32
5.2
33
82
8
199
17
22
17
41
1.89
58522560--58522730
67
2.6
67
91
0
270
18
22
17
41
1.90
58525517--58525561
20
2.1
22
84
12
58
13
11
8
66
1.44
58529971--58530010
21
1.9
21
100
0
80
55
15
0
30
1.41
58534651--58534712
29
2.1
30
90
6
99
50
3
8
38
1.48
58534930--58535047
43
2.7
43
84
5
159
30
25
20
23
1.98
58534947--58535077
43
3.0
42
78
8
113
29
23
19
27
1.98
58538037--58538204
82
2.0
82
79
6
180
34
24
21
19
1.96
58538088--58538206
41
2.9
41
87
2
159
36
24
19
20
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58540229--58540361
66
2.0
64
81
8
151
12
27
19
40
1.88
58542437--58542478
10
4.2
10
81
0
57
33
0
16
50
1.46
58543508--58543723
40
5.2
40
75
7
180
24
24
18
32
1.97
58548896--58548938
21
2.0
21
90
0
68
37
11
13
37
1.82
58549598--58549825
107
2.1
107
90
0
366
23
7
23
45
1.79
58549781--58549818
11
3.4
11
82
17
51
10
10
15
63
1.52
58550965--58551053
37
2.4
37
94
0
160
43
14
6
34
1.72
58551268--58551333
33
2.0
33
96
0
123
43
13
6
36
1.69
58552917--58552943
11
2.5
11
100
0
54
22
7
18
51
1.70
58554430--58554572
47
3.1
47
71
13
143
44
2
4
48
1.36
58554374--58554619
91
2.7
91
93
0
413
45
2
3
47
1.35
58554444--58554587
47
3.1
46
70
16
136
44
2
3
50
1.30
58554735--58554764
16
1.9
15
93
6
51
40
0
10
50
1.36
58554635--58555292
120
5.5
120
93
0
1104
42
2
5
48
1.42
58554756--58554790
18
2.0
17
88
5
52
45
0
0
54
0.99
58554889--58554935
16
3.0
16
78
12
53
46
0
2
51
1.13
58554996--58555030
18
2.0
17
88
5
52
45
0
0
54
0.99
58555129--58555175
16
3.0
16
78
12
53
46
0
2
51
1.13
58559116--58559289
87
2.0
87
98
0
339
31
18
17
32
1.94
58559582--58559753
43
4.0
43
80
6
197
31
22
18
28
1.97
58559597--58559773
43
4.1
43
78
5
171
28
23
19
28
1.98
58559611--58559794
85
2.2
85
80
3
201
32
22
17
26
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58559939--58560000
28
2.2
29
81
18
78
48
32
0
19
1.49
58560169--58560246
40
2.0
40
87
5
113
23
23
21
32
1.98
58560181--58560278
40
2.4
41
77
5
101
29
23
17
29
1.97
58560322--58560429
40
2.7
40
82
0
135
25
23
20
31
1.98
58560117--58560544
152
2.8
150
85
6
529
28
24
15
31
1.96
58560476--58560605
40
3.2
40
79
7
120
24
23
20
31
1.98
58560494--58560621
41
3.1
41
82
5
127
24
26
19
29
1.98
58571801--58571960
87
1.8
87
86
5
234
41
16
19
22
1.89
58582272--58582466
45
4.4
45
83
5
243
45
20
13
20
1.84
58582285--58582456
90
1.9
90
90
4
276
44
19
13
22
1.85

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218