Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_D01
Parameters: 2 7 7 80 10 50 1000
Length:  62811768

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   

This is table  148  of  211  ( 25234 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43991147--43991243
26
3.8
26
69
26
66
63
1
3
31
1.16
43991162--43991244
35
2.4
35
84
9
100
65
1
3
30
1.17
43991318--43991367
3
16.7
3
84
15
68
62
2
0
36
1.07
43991930--43991970
17
2.5
16
81
18
57
80
2
12
4
0.97
43995082--43995130
22
2.3
20
75
6
53
40
8
22
28
1.82
43995296--43995359
20
3.2
20
75
16
60
37
3
15
43
1.63
43996538--43996582
13
3.6
12
80
11
54
73
4
8
13
1.23
43996520--43996566
17
2.8
17
83
0
58
72
4
6
17
1.22
44000682--44000722
15
2.7
16
77
11
50
12
31
31
24
1.92
44003285--44003333
15
2.9
17
82
11
57
77
2
0
20
0.87
44003308--44003333
5
5.2
5
100
0
52
80
0
0
19
0.71
44003528--44003646
59
2.0
59
96
0
220
38
9
12
39
1.75
44008495--44008538
15
2.8
16
79
6
54
68
0
0
31
0.90
44008489--44008565
30
2.5
31
76
6
84
67
3
0
28
1.08
44008545--44008593
19
2.6
18
78
9
53
69
4
2
24
1.17
44018676--44018742
6
11.0
6
90
3
89
77
5
0
16
0.95
44018673--44018742
31
2.3
31
85
9
99
77
7
0
15
0.98
44018676--44018735
25
2.4
25
86
2
86
78
5
0
16
0.92
44020134--44020162
3
10.0
3
92
7
51
65
0
0
34
0.93
44020255--44020343
5
17.6
5
70
21
53
73
3
2
21
1.09
44020248--44020321
14
5.1
14
80
16
89
75
1
0
22
0.88
44020251--44020348
33
3.0
33
75
13
94
71
3
2
23
1.11
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44021664--44021717
21
2.8
18
74
17
54
27
5
3
62
1.34
44021784--44021851
25
2.6
27
69
9
68
38
4
2
54
1.36
44026872--44026901
9
3.2
9
95
4
51
86
0
0
13
0.57
44026881--44026938
30
1.9
30
82
6
73
72
6
6
13
1.26
44029044--44029360
87
3.6
87
89
0
463
29
22
23
23
1.99
44029578--44029875
44
6.8
44
69
7
151
30
18
22
28
1.97
44030542--44030581
20
2.0
20
95
4
73
70
5
20
5
1.26
44031291--44031344
21
2.8
18
74
17
54
27
5
3
62
1.34
44031315--44031363
25
2.0
25
83
0
62
32
6
6
55
1.49
44031411--44031478
25
2.6
27
69
9
68
38
4
2
54
1.36
44033476--44033593
60
2.0
60
91
0
191
38
19
10
32
1.85
44036528--44036567
19
2.1
19
90
4
62
75
0
2
22
0.93
44037342--44037388
19
2.8
17
78
15
53
42
4
2
51
1.33
44037414--44037450
16
2.3
16
86
13
58
40
0
0
59
0.97
44037436--44037471
18
1.9
18
88
5
54
58
0
0
41
0.98
44037465--44037520
12
4.7
12
79
16
71
53
0
0
46
1.00
44038180--44038227
23
2.1
23
96
0
87
29
25
10
35
1.89
44041584--44041723
42
3.3
42
76
5
131
30
26
18
24
1.98
44042767--44042956
43
4.4
43
87
2
249
31
25
18
24
1.97
44047538--44047591
7
7.7
7
82
0
54
29
44
0
25
1.54
44047699--44047758
21
2.8
20
78
9
66
33
43
0
23
1.54
44047707--44047758
7
7.4
7
78
8
52
34
44
0
21
1.52
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44047797--44047842
7
6.7
7
78
14
51
39
43
0
17
1.49
44047800--44047841
13
3.2
13
86
3
57
38
45
0
16
1.48
44047973--44048009
14
2.5
15
95
4
67
35
35
0
29
1.58
44048398--44048538
41
3.4
41
82
3
176
31
27
19
21
1.98
44053219--44053324
24
4.5
24
69
8
65
36
0
4
57
1.26
44055956--44055988
7
4.7
7
100
0
66
30
42
0
27
1.56
44055948--44055988
21
2.0
21
90
9
66
29
41
0
29
1.56
44055956--44056016
14
4.4
14
80
12
54
36
40
1
21
1.63
44055956--44056002
21
2.2
21
85
7
60
34
42
0
23
1.54
44056026--44056198
81
2.1
80
83
10
217
45
24
1
28
1.63
44056217--44056249
15
2.3
15
89
5
50
36
30
0
33
1.58
44056644--44056754
41
2.7
41
92
2
179
28
29
19
21
1.98
44065252--44065278
14
1.9
14
100
0
54
74
0
3
22
0.98
44066167--44066236
19
3.7
19
74
18
74
60
5
0
34
1.21
44066218--44066262
16
2.6
18
75
10
58
55
4
0
40
1.20
44066204--44066262
19
3.4
17
76
11
57
55
6
0
37
1.26
44068858--44069118
43
6.1
43
83
1
312
25
29
19
24
1.99
44068858--44069118
85
3.1
85
87
1
371
25
29
19
24
1.99
44073707--44073739
16
2.1
16
88
11
50
57
0
0
42
0.98
44073840--44073893
7
7.6
7
77
4
54
48
29
0
22
1.51
44073840--44073951
14
7.4
14
69
20
64
47
29
2
20
1.64
44073840--44073888
14
3.4
14
88
5
71
46
32
0
20
1.51
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44074121--44074522
41
9.9
41
87
1
583
31
29
19
19
1.96
44074121--44074522
203
2.0
205
90
2
639
31
29
19
19
1.96
44074567--44074695
40
3.2
40
77
11
131
20
24
23
31
1.98
44074580--44074695
40
3.0
40
84
2
155
23
23
21
31
1.98
44078069--44078129
30
2.0
30
83
0
77
14
31
31
22
1.94
44080226--44080265
14
2.8
14
96
3
71
7
5
25
62
1.42
44081919--44081949
15
2.1
15
100
0
62
38
6
32
22
1.80
44085129--44085159
15
2.1
15
100
0
62
38
6
32
22
1.80
44090645--44090688
22
2.0
21
82
4
52
40
11
20
27
1.86
44091173--44091264
44
2.0
46
89
4
143
23
18
22
34
1.96
44100317--44100410
46
2.0
46
93
0
161
24
19
21
35
1.96
44107830--44107906
25
3.0
25
81
5
75
32
23
23
20
1.98
44108978--44109269
110
2.7
110
90
2
448
33
20
16
29
1.95
44109317--44109356
20
2.1
18
86
13
53
57
2
15
25
1.50
44111129--44111234
50
2.1
50
85
0
140
33
19
16
31
1.94
44111212--44111584
50
7.5
49
70
10
182
23
21
22
32
1.98
44111212--44111785
100
5.8
98
83
4
591
23
21
22
33
1.98
44111868--44113202
46
29.2
46
87
2
1772
29
26
16
27
1.97
44114409--44114452
7
6.0
7
82
15
54
13
13
0
72
1.12
44114418--44114477
9
6.6
9
78
17
54
11
11
0
76
1.02
44114409--44114477
23
3.0
22
84
14
86
13
13
0
73
1.09
44114444--44114472
13
2.1
14
93
6
51
13
13
0
72
1.13
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44115298--44115359
8
7.6
8
83
15
65
9
1
8
80
0.97
44115277--44115359
17
5.1
15
75
12
58
7
6
6
80
1.01
44118748--44119019
110
2.5
110
85
1
359
34
20
14
30
1.93
44119068--44119107
20
2.1
18
86
13
53
57
2
15
25
1.50
44119421--44119466
3
15.3
3
95
0
83
65
0
2
32
1.05
44121517--44121616
42
2.4
42
94
0
173
24
28
12
36
1.91
44125596--44125646
18
2.9
18
77
5
52
70
9
5
13
1.32
44132875--44132956
3
27.3
3
71
18
55
60
4
2
31
1.30
44134196--44134637
43
10.4
43
70
9
264
28
23
19
28
1.98
44134141--44134650
126
4.0
126
90
0
768
28
22
19
29
1.98
44139309--44139382
27
2.7
27
97
0
139
67
5
10
16
1.38
44150762--44150796
3
11.7
3
100
0
70
68
0
31
0
0.90
44151217--44151251
15
2.3
15
90
9
54
42
20
14
22
1.88
44151540--44151607
33
2.1
32
83
8
84
41
7
1
50
1.39
44151618--44151680
19
3.3
20
82
8
78
38
0
1
60
1.07
44151969--44152035
25
2.5
26
77
15
66
17
1
20
59
1.45
44152277--44152325
16
3.1
16
85
8
73
40
6
30
22
1.78
44152280--44152332
16
3.3
15
84
10
70
41
5
30
22
1.77
44152314--44152407
44
2.1
44
86
4
125
31
5
27
35
1.79
44152505--44152581
22
3.1
24
71
22
61
57
1
1
40
1.15
44152515--44152558
22
2.0
21
91
4
70
56
2
0
40
1.11
44152567--44152600
17
2.0
17
100
0
68
58
0
0
41
0.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44152581--44152781
61
3.3
61
72
12
207
50
4
2
42
1.37
44152551--44152815
120
2.2
119
97
0
503
51
3
1
42
1.30
44152776--44152815
13
3.2
12
80
13
53
57
0
0
42
0.98
44154965--44155069
51
2.1
50
92
1
174
42
20
10
26
1.84
44155327--44155778
227
2.0
227
96
0
823
33
19
23
23
1.97
44167404--44167442
21
1.9
21
84
5
53
64
0
5
30
1.15
44167979--44168037
25
2.3
26
83
11
70
54
3
18
23
1.59
44169938--44169994
25
2.3
25
90
0
96
50
7
17
24
1.70
44170141--44170171
13
2.4
13
94
0
53
67
3
9
19
1.33
44172713--44172784
25
2.9
25
80
0
72
36
19
16
27
1.93

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211