Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_D01
Parameters: 2 7 7 80 10 50 1000
Length:  62811768

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   

This is table  197  of  211  ( 25234 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58037160--58037259
51
2.0
51
84
7
132
26
27
3
44
1.69
58039056--58039095
18
2.2
18
86
0
53
17
30
7
45
1.76
58039587--58039615
8
3.8
8
90
9
51
48
0
0
51
1.00
58039667--58040684
21
48.0
21
72
10
555
46
24
1
27
1.62
58039638--58040684
22
49.0
22
72
10
660
46
25
1
27
1.62
58039780--58040025
81
3.0
80
84
2
278
47
23
0
28
1.57
58039895--58040684
43
18.6
43
75
10
540
45
24
1
27
1.62
58039830--58040112
81
3.5
81
82
6
272
48
23
1
27
1.58
58040044--58040073
15
2.0
15
93
0
51
50
30
0
20
1.49
58039971--58040684
64
11.2
64
76
11
367
45
24
1
27
1.63
58040268--58040327
29
2.1
29
84
6
77
50
20
3
26
1.64
58040246--58040348
51
2.0
50
90
1
161
48
22
1
27
1.61
58040182--58040412
115
2.0
114
90
0
363
45
24
2
27
1.66
58040268--58040342
29
2.6
29
81
8
73
49
21
2
26
1.63
58043853--58044407
126
4.4
125
85
4
735
30
23
16
29
1.96
58044541--58044570
9
3.3
9
90
0
51
56
23
0
20
1.42
58044533--58044570
18
2.1
18
95
0
67
57
23
0
18
1.40
58051062--58051100
20
2.0
20
94
0
69
51
12
0
35
1.40
58056525--58056562
16
2.4
16
100
0
76
47
18
0
34
1.49
58067996--58068023
5
5.6
5
100
0
56
21
60
17
0
1.36
58070538--58070576
9
4.3
9
83
0
51
51
12
5
30
1.62
58071729--58071880
66
2.3
66
86
0
205
24
26
9
40
1.85
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58072239--58072284
17
2.7
17
96
0
83
41
6
6
45
1.56
58073487--58073516
12
2.4
13
94
5
53
46
3
23
26
1.68
58073608--58073663
27
2.1
27
82
0
67
26
14
33
25
1.94
58085748--58085772
12
2.1
12
100
0
50
48
16
0
36
1.46
58085847--58085887
20
2.0
22
85
9
59
43
9
9
36
1.71
58102262--58102305
3
14.3
3
90
4
70
65
2
2
29
1.16
58105408--58105569
41
4.0
41
93
1
254
22
28
20
28
1.99
58110876--58111107
46
5.0
46
93
0
383
28
28
8
34
1.87
58111853--58111885
17
1.9
17
93
0
57
54
24
3
18
1.57
58116696--58116735
14
2.9
14
84
0
62
65
0
0
35
0.93
58117031--58117118
44
2.0
44
91
4
142
35
9
19
36
1.83
58119241--58119304
17
3.6
17
78
15
76
28
12
12
46
1.78
58119232--58119304
36
2.0
36
97
0
137
28
12
13
45
1.80
58119232--58119288
19
3.1
19
76
19
75
28
12
14
45
1.80
58124351--58124411
17
3.5
17
77
16
70
27
13
11
47
1.77
58124342--58124411
36
1.9
36
97
0
131
28
12
12
45
1.79
58124342--58124398
19
3.1
19
76
19
75
28
12
14
45
1.80
58124607--58124703
49
2.0
48
89
2
149
21
14
22
41
1.89
58128540--58128635
41
2.4
41
89
1
140
26
25
9
39
1.85
58131648--58131688
20
2.1
19
86
4
55
46
0
0
53
1.00
58131730--58131845
61
1.9
58
87
5
169
40
3
4
51
1.38
58131736--58131865
58
2.2
60
83
9
160
40
3
6
50
1.45
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58131913--58131942
14
2.1
14
100
0
60
46
0
26
26
1.53
58131935--58131986
25
2.0
25
82
10
61
42
3
11
42
1.59
58135450--58135496
19
2.5
20
79
10
62
72
2
6
19
1.17
58135527--58135615
4
22.8
4
70
21
64
69
4
1
24
1.14
58135562--58135614
15
3.5
15
74
23
56
71
0
0
28
0.86
58135527--58135615
20
4.4
19
77
16
81
69
4
1
24
1.14
58138665--58138863
102
2.0
102
95
0
362
32
16
18
33
1.93
58149960--58149995
13
2.8
13
91
0
54
44
5
2
47
1.41
58160148--58160271
61
2.0
61
84
3
160
29
16
16
36
1.92
58171250--58171299
24
2.2
23
89
7
75
56
6
4
34
1.43
58173199--58173235
18
2.1
18
90
10
58
54
0
16
29
1.43
58174975--58175332
44
8.0
45
73
6
244
26
24
17
30
1.97
58174977--58175287
89
3.5
90
85
5
432
26
25
18
30
1.97
58174978--58175334
181
2.0
181
83
3
459
26
24
17
30
1.97
58183416--58183455
20
2.0
20
100
0
80
30
15
25
30
1.95
58187249--58187281
16
2.0
17
94
5
59
54
0
15
30
1.41
58190442--58190506
30
2.2
30
97
0
121
23
3
15
58
1.51
58190617--58190653
11
3.2
12
85
11
51
67
0
0
32
0.91
58195118--58195295
38
4.8
36
76
8
142
32
6
3
57
1.43
58196259--58196303
22
2.0
22
86
0
63
26
8
4
60
1.46
58197127--58197207
35
2.3
35
95
0
144
35
2
13
48
1.56
58197153--58197209
16
3.4
16
69
21
53
31
1
12
54
1.48
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58199964--58200147
54
3.5
53
79
5
194
32
11
20
34
1.89
58211436--58211487
23
2.3
22
75
21
54
9
23
1
65
1.32
58211445--58211499
12
4.6
12
73
15
51
12
23
0
63
1.29
58211481--58211518
17
2.2
18
85
4
51
10
23
2
63
1.39
58214787--58214817
3
10.3
3
100
0
62
67
0
0
32
0.91
58219085--58219146
22
2.8
20
75
15
61
27
3
1
67
1.15
58219245--58219282
18
2.1
19
90
5
60
23
5
5
65
1.34
58221201--58221279
27
2.9
27
100
0
158
22
26
22
27
1.99
58222085--58222126
9
4.7
9
84
0
57
16
45
16
21
1.86
58226485--58226544
28
2.2
28
82
5
70
51
1
3
43
1.28
58227594--58227653
6
10.5
6
85
10
54
68
20
0
11
1.20
58227597--58227631
3
11.7
3
93
0
61
68
28
0
2
1.04
58229417--58229702
88
3.2
88
73
8
290
29
16
22
31
1.95
58229262--58229795
179
3.0
178
86
2
705
29
18
20
31
1.96
58229402--58229786
45
8.6
44
71
10
203
29
18
20
31
1.97
58231041--58231069
15
1.9
15
100
0
58
6
0
6
86
0.72
58233780--58233847
12
5.4
13
75
18
63
67
7
2
22
1.29
58233822--58233889
6
12.4
5
83
10
57
70
2
4
22
1.18
58233859--58233888
9
3.2
9
90
9
51
80
0
0
20
0.72
58235258--58235342
33
2.7
30
80
12
84
52
2
4
40
1.35
58235942--58235993
26
2.0
27
88
11
81
36
1
7
53
1.41
58242776--58242830
19
3.1
17
78
14
58
54
1
0
43
1.10
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58264064--58264115
24
2.3
21
79
17
68
36
7
3
51
1.49
58264072--58264120
24
2.0
24
100
0
98
38
8
4
48
1.52
58265826--58265890
32
2.0
32
96
0
121
30
29
12
27
1.93
58268127--58268162
17
2.1
17
90
10
56
50
0
11
38
1.38
58271239--58271296
25
2.3
26
82
8
75
10
13
27
48
1.75
58273667--58273749
25
3.3
25
68
0
76
34
19
25
20
1.96
58273782--58273920
25
5.6
26
72
10
94
35
21
23
19
1.96
58273771--58273925
25
6.2
26
68
15
85
37
20
22
19
1.94
58280772--58280811
16
2.3
18
80
20
50
55
2
2
40
1.27
58284772--58284804
2
16.5
2
100
0
66
48
0
0
51
1.00
58286358--58286392
6
5.8
6
96
0
52
51
5
0
42
1.25
58288320--58288371
24
2.2
24
89
0
77
55
9
1
32
1.43
58302203--58302263
3
21.0
3
89
3
81
63
0
4
31
1.15
58304008--58304078
36
2.0
36
97
0
133
9
7
30
52
1.61
58313492--58313535
2
22.0
2
100
0
88
0
50
0
50
1.00
58314126--58314320
102
1.9
102
81
8
236
45
5
4
44
1.46
58315747--58315802
23
2.5
23
81
18
73
25
30
1
42
1.65
58315747--58315803
22
2.6
21
84
15
71
24
31
1
42
1.65
58315747--58315802
11
5.0
11
77
16
62
25
30
1
42
1.65
58315761--58315860
51
2.0
51
86
4
139
26
26
3
45
1.68
58317002--58317027
7
3.7
7
100
0
52
26
0
15
57
1.38
58317677--58317716
18
2.2
18
86
0
53
17
30
7
45
1.76
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58318272--58318393
21
5.8
21
77
9
122
44
24
3
27
1.69
58318267--58318393
43
3.0
41
81
11
148
44
25
3
27
1.69
58318267--58318390
64
2.0
63
82
7
153
42
25
3
28
1.70
58321578--58322018
125
3.5
124
89
3
636
30
22
17
29
1.97
58322698--58322849
73
2.1
72
85
4
200
30
20
21
27
1.98
58322759--58323073
113
2.8
114
89
1
490
25
20
26
27
1.99
58322986--58323146
73
2.2
73
93
2
270
24
19
26
29
1.99
58322873--58323285
187
2.2
186
88
1
621
26
20
27
26
1.99
58323516--58323549
14
2.4
14
90
0
50
14
0
35
50
1.44
58323574--58323621
22
2.2
21
77
3
51
22
0
29
47
1.51

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211