Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Chr8
Parameters: 2 7 7 80 10 50 1000
Length:  70076365

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   

This is table  195  of  210  ( 25174 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64738132--64738166
12
2.9
12
86
0
52
2
0
60
37
1.12
64747327--64747385
31
1.9
31
82
6
75
30
13
15
40
1.86
64751642--64751883
122
2.0
122
96
0
448
25
19
16
38
1.92
64754318--64754438
44
2.7
45
87
2
172
27
19
17
35
1.94
64754515--64754554
21
1.9
21
84
0
53
35
22
17
25
1.95
64755202--64755400
97
2.0
98
98
1
382
41
13
11
34
1.80
64761341--64761435
24
3.9
24
86
4
109
55
7
22
14
1.64
64761355--64761435
24
3.3
24
92
1
126
54
6
23
16
1.64
64762692--64762858
55
3.0
55
79
1
192
25
30
23
19
1.98
64763521--64763589
34
2.0
34
97
0
129
26
15
28
28
1.96
64763555--64763716
48
3.4
48
83
1
193
35
17
20
25
1.95
64767904--64767951
3
16.0
3
95
0
87
33
35
0
31
1.58
64778595--64778655
2
30.5
2
100
0
122
0
49
0
50
1.00
64790148--64790339
84
2.3
84
98
0
368
51
7
5
35
1.54
64800652--64800676
13
1.9
13
100
0
50
32
4
24
40
1.73
64801259--64801354
44
2.2
42
83
7
122
27
15
27
30
1.96
64801259--64801403
42
3.4
43
79
4
141
26
16
24
31
1.96
64803933--64804018
38
2.3
38
79
4
93
32
6
5
54
1.51
64805201--64805239
20
2.0
20
84
0
51
58
0
5
35
1.20
64805243--64805379
17
7.4
18
74
18
86
60
0
2
35
1.17
64805243--64805380
39
3.7
36
73
16
111
60
0
2
35
1.17
64808262--64808351
27
3.2
27
75
17
92
41
6
14
37
1.72
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64808702--64808762
12
5.4
12
73
21
53
49
0
1
49
1.10
64808683--64808775
34
2.5
38
75
21
106
50
1
1
47
1.15
64808694--64808786
34
2.6
37
80
16
115
50
0
2
47
1.13
64809725--64809840
61
1.9
61
91
3
189
43
0
1
53
1.16
64810560--64810604
19
2.3
19
84
3
54
80
2
11
6
0.99
64810595--64810635
21
2.0
21
85
9
57
68
0
19
12
1.21
64811502--64811674
86
2.0
87
98
1
339
52
2
6
39
1.40
64818194--64818233
20
2.0
20
85
0
53
42
20
7
30
1.79
64834028--64834065
18
2.1
18
90
0
58
78
10
0
10
0.95
64839567--64839604
12
3.2
12
88
0
58
55
0
10
34
1.34
64839566--64839625
24
2.3
26
83
8
70
58
0
8
33
1.28
64841045--64841078
15
2.3
15
90
10
52
50
2
0
47
1.16
64843555--64843887
43
7.8
43
87
2
420
30
34
16
19
1.93
64848140--64848216
40
1.9
40
86
5
111
36
22
18
23
1.95
64848131--64848425
41
7.2
41
85
6
364
31
31
19
17
1.95
64848485--64848595
40
2.8
40
87
1
161
20
24
20
34
1.97
64849656--64849693
3
12.7
3
100
0
76
0
34
0
65
0.93
64849903--64849933
3
10.3
3
100
0
62
35
32
0
32
1.58
64851163--64851212
21
2.5
19
84
15
57
26
4
6
64
1.35
64865525--64865550
2
13.0
2
100
0
52
50
0
0
50
1.00
64870624--64870671
24
2.0
23
88
4
69
54
0
0
45
0.99
64873450--64873513
32
2.0
32
100
0
128
34
18
15
31
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64874777--64874808
16
2.0
16
100
0
64
37
0
37
25
1.56
64875759--64875919
40
4.0
40
100
0
322
50
7
14
27
1.70
64882038--64882070
2
16.5
2
100
0
66
51
48
0
0
1.00
64882681--64883317
311
2.0
312
96
1
1163
41
15
19
23
1.90
64883844--64883886
22
2.0
22
90
0
68
55
6
30
6
1.53
64883846--64883893
22
2.2
22
81
3
62
58
6
25
10
1.54
64887423--64887466
17
2.8
15
77
12
52
59
2
0
38
1.10
64892817--64892868
3
17.3
3
100
0
104
34
0
0
65
0.93
64895219--64895245
5
5.4
5
100
0
54
0
18
0
81
0.69
64899747--64900467
357
2.0
357
96
0
1334
34
21
18
25
1.96
64911344--64911376
16
2.1
16
94
0
57
54
24
3
18
1.57
64918001--64918027
13
2.1
13
100
0
54
22
25
22
29
1.99
64922392--64922438
22
2.2
22
96
3
87
53
4
25
17
1.62
64928786--64928836
22
2.3
23
93
3
86
39
3
25
31
1.74
64928911--64929006
26
3.5
26
69
15
75
52
3
1
43
1.24
64931504--64931568
34
1.9
34
84
12
89
38
1
0
60
1.07
64934740--64934872
70
1.9
69
86
4
187
34
16
18
30
1.93
64938122--64938174
13
4.1
13
85
0
79
28
7
28
35
1.84
64940508--64940880
123
3.0
123
99
0
728
29
30
16
24
1.96
64949923--64949948
2
13.0
2
100
0
52
50
0
0
50
1.00
64949949--64950036
43
2.0
44
97
2
169
30
11
19
38
1.87
64951871--64951896
2
13.0
2
100
0
52
50
0
0
50
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64954115--64954222
54
2.0
54
94
0
189
45
12
12
29
1.79
64960980--64961010
12
2.5
12
94
5
53
29
29
19
22
1.98
64969601--64969662
30
2.0
31
93
3
108
27
6
22
43
1.77
64970771--64971289
259
2.0
260
99
0
1031
38
15
10
35
1.81
64974036--64974066
1
31.0
1
93
0
53
96
3
0
0
0.21
64974035--64974067
11
3.1
11
91
8
59
90
9
0
0
0.44
64977770--64977834
30
2.2
30
86
5
87
50
6
1
41
1.36
64982028--64982077
25
2.0
25
88
0
73
34
16
10
40
1.81
64983843--64983900
2
29.0
2
89
0
89
44
50
5
0
1.24
64995561--64995642
31
2.8
29
73
10
85
53
9
10
25
1.66
64997526--64998029
114
4.4
112
75
9
423
30
17
24
27
1.97
64999003--64999078
7
11.0
7
83
8
84
10
0
43
46
1.38
64999003--64999077
27
2.7
27
91
2
114
9
0
44
46
1.35
64999002--64999052
20
2.5
20
93
3
84
7
0
50
41
1.31
65006307--65006350
22
2.0
22
90
0
70
45
27
18
9
1.79
65008733--65008800
34
2.0
34
97
0
127
36
14
10
38
1.81
65012976--65013048
26
2.8
25
83
6
92
38
6
20
34
1.79
65019799--65019841
22
2.0
22
86
9
61
34
0
6
58
1.25
65025146--65025634
244
2.0
245
99
0
971
45
12
10
31
1.76
65026495--65026672
97
1.8
97
84
7
245
32
5
16
46
1.69
65028181--65028213
17
2.0
17
88
5
50
45
0
0
54
0.99
65030268--65030297
16
1.9
15
93
6
51
30
33
23
13
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65031260--65031300
19
2.2
20
86
8
59
24
4
9
60
1.47
65033651--65033675
6
4.2
6
100
0
50
48
36
0
16
1.46
65037690--65037743
25
2.2
26
83
12
69
18
7
5
68
1.33
65040037--65040071
16
2.1
17
94
5
63
11
2
0
85
0.69
65040066--65040117
18
2.8
18
80
11
61
32
7
0
59
1.26
65040066--65040119
20
2.9
18
80
20
58
33
9
0
57
1.31
65041884--65041922
19
2.1
18
85
4
51
30
2
5
61
1.31
65042605--65042693
28
3.2
28
76
12
76
71
6
2
19
1.18
65042613--65042653
22
1.9
21
85
5
55
75
2
0
21
0.92
65043172--65043233
29
2.1
29
85
5
81
33
8
1
56
1.38
65046273--65046306
16
2.1
17
88
5
52
47
0
11
41
1.40
65048110--65048142
9
3.8
9
88
4
50
75
0
0
24
0.80
65069676--65069774
31
3.3
29
82
5
108
48
14
14
23
1.79
65077491--65077537
8
5.4
9
78
17
55
65
0
2
31
1.04
65077491--65077558
17
4.3
15
78
15
66
69
0
2
27
1.03
65077776--65077959
60
3.2
59
78
6
187
42
15
19
22
1.89
65079482--65079514
18
1.9
17
88
11
50
54
0
0
45
0.99
65079532--65079581
16
3.0
16
79
5
55
64
4
0
32
1.12
65082699--65083447
375
2.0
374
97
1
1403
35
7
17
38
1.79
65084396--65084433
20
1.9
20
100
0
76
57
10
10
21
1.61
65086316--65086452
57
2.3
57
82
8
159
27
20
27
24
1.99
65089479--65089591
47
2.4
47
78
8
115
37
14
21
27
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65091296--65091406
19
5.9
19
68
20
58
38
1
0
58
1.15
65091347--65091405
9
6.6
9
75
13
50
38
0
1
59
1.08
65099708--65099896
96
2.0
95
87
7
280
38
20
1
39
1.62
65100062--65100159
40
2.5
40
84
0
133
24
24
23
27
2.00
65100062--65100170
40
2.7
40
80
2
130
24
22
22
29
1.99
65104658--65104709
24
2.2
24
83
13
63
53
9
3
32
1.51
65116157--65116182
2
13.0
2
100
0
52
50
0
0
50
1.00
65117134--65117189
20
2.7
21
80
5
69
32
0
5
62
1.18
65117264--65117298
18
1.9
18
88
0
52
31
5
11
51
1.61
65118844--65118899
24
2.2
26
84
9
80
50
0
3
46
1.19

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210