Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168048.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_3, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33276047

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   

This is table  165  of  190  ( 22769 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26797196--26797282
18
4.9
18
72
15
58
44
2
1
51
1.21
26797430--26797485
20
2.8
20
80
2
58
46
5
1
46
1.36
26802594--26802646
20
2.5
20
85
14
72
50
0
0
49
1.00
26802595--26802646
21
2.5
22
90
6
81
50
0
0
50
1.00
26802632--26802676
8
5.8
8
86
2
65
60
0
0
40
0.97
26802636--26802684
24
2.0
24
88
0
71
61
0
0
38
0.96
26806773--26806816
21
2.0
22
87
12
65
52
2
0
45
1.13
26806987--26807037
23
2.2
23
89
0
75
54
3
0
41
1.19
26807001--26807042
12
3.5
12
77
9
50
50
4
0
45
1.23
26806986--26807059
23
3.4
22
80
14
73
55
4
0
40
1.19
26810145--26810178
2
17.0
2
100
0
68
50
0
0
50
1.00
26812302--26812349
16
2.7
18
71
15
55
39
0
0
60
0.97
26815511--26815551
3
13.7
3
84
0
55
0
31
7
60
1.24
26819063--26819132
35
2.0
35
97
0
131
35
17
10
37
1.83
26820483--26820540
6
9.7
6
78
0
62
3
25
48
22
1.66
26820483--26820540
12
4.8
12
80
0
71
3
25
48
22
1.66
26823137--26823169
18
1.9
18
88
11
52
72
0
3
24
0.98
26829550--26829588
20
1.9
20
89
5
60
43
2
0
53
1.14
26830170--26830204
17
2.1
17
88
0
52
77
5
0
17
0.96
26830520--26830575
27
2.0
28
86
10
80
57
1
0
41
1.09
26832310--26832360
22
2.2
24
82
10
61
47
1
5
45
1.38
26832521--26832545
11
2.3
11
100
0
50
16
8
0
76
1.02
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26833397--26833470
25
3.0
25
76
11
73
58
1
0
40
1.07
26840599--26840689
41
2.2
42
82
5
105
40
5
2
51
1.37
26840697--26840755
25
2.5
24
78
13
68
52
3
0
44
1.17
26840918--26840973
16
3.5
15
77
15
60
3
26
1
67
1.16
26840966--26841013
12
4.0
12
76
10
53
2
37
0
60
1.09
26840918--26840999
18
4.8
17
72
19
64
3
29
1
65
1.17
26843680--26843719
16
2.4
17
88
12
57
72
10
5
12
1.26
26844961--26844994
16
2.1
17
88
5
52
73
0
2
23
0.97
26844956--26844990
13
2.6
13
90
4
52
74
0
2
22
0.95
26845601--26845654
18
3.1
17
72
5
54
40
12
7
38
1.72
26845331--26845671
174
2.0
172
82
4
416
40
12
11
34
1.80
26845857--26845917
17
3.6
17
69
8
61
29
6
11
52
1.62
26845840--26845928
34
2.6
34
90
1
133
30
8
12
48
1.71
26845914--26845980
17
3.9
17
75
12
75
28
7
11
52
1.65
26846018--26846070
17
3.1
17
78
7
63
35
3
15
45
1.64
26846056--26846109
17
3.4
17
73
21
53
37
16
12
33
1.87
26846136--26846168
17
2.0
16
94
5
57
42
12
9
36
1.74
26846141--26846177
17
2.2
17
90
0
56
45
8
8
37
1.63
26848609--26848663
23
2.4
23
96
3
103
49
18
7
25
1.73
26852108--26852157
15
3.4
15
74
20
52
70
4
2
24
1.15
26852102--26852172
29
2.4
29
79
9
81
66
4
1
28
1.19
26853382--26853417
16
2.2
17
90
5
56
75
0
2
22
0.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26854018--26854053
18
1.9
19
88
5
56
11
2
16
69
1.29
26856002--26856026
13
1.9
13
100
0
50
72
0
0
28
0.86
26856675--26856713
17
2.3
17
86
0
51
74
5
2
17
1.12
26856769--26856807
9
4.3
9
86
0
51
69
5
0
25
1.09
26856860--26856897
15
2.5
16
83
12
53
78
10
0
10
0.95
26857044--26857109
18
3.7
17
78
9
62
34
1
7
56
1.37
26857044--26857106
17
3.6
18
75
10
58
36
1
7
53
1.40
26857114--26857151
17
2.3
17
86
4
51
21
0
5
73
1.02
26857109--26857151
17
2.6
16
81
7
50
18
2
4
74
1.10
26857159--26857209
27
1.9
27
84
11
70
23
9
5
60
1.50
26857461--26857534
10
7.7
9
72
17
51
27
2
4
66
1.23
26857404--26857534
29
4.5
29
74
12
90
26
4
6
61
1.41
26857483--26857527
9
4.9
9
79
15
56
20
2
6
71
1.20
26857482--26857527
18
2.5
18
89
10
67
21
2
6
69
1.22
26857461--26857527
19
3.5
18
76
15
55
25
2
4
67
1.24
26857796--26857874
41
1.9
41
82
10
99
43
3
3
49
1.38
26859905--26859949
23
2.1
20
88
12
63
55
0
0
44
0.99
26859905--26859949
10
4.2
10
84
15
63
55
0
0
44
0.99
26859923--26859966
13
3.3
13
80
3
52
56
0
0
43
0.99
26864556--26864605
19
2.6
19
78
12
57
44
0
2
54
1.11
26864557--26864593
20
2.0
20
89
10
60
43
0
2
54
1.14
26864557--26864600
20
2.2
21
84
8
56
45
0
2
52
1.13
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26864755--26864808
15
3.5
15
85
5
81
40
0
1
57
1.09
26864989--26865013
13
1.9
13
100
0
50
40
0
0
60
0.97
26867476--26867537
30
2.1
30
87
6
90
33
22
3
40
1.70
26871583--26871665
39
2.2
39
88
2
123
50
4
1
43
1.31
26871974--26872038
16
4.1
16
72
7
51
43
6
4
46
1.49
26875300--26875340
2
20.5
2
100
0
82
0
48
0
51
1.00
26876077--26876101
9
2.8
9
100
0
50
36
0
0
64
0.94
26877010--26877051
21
2.0
22
90
4
68
45
0
4
50
1.23
26877650--26877694
18
2.5
19
89
10
76
84
8
4
2
0.84
26878218--26878501
140
2.0
139
94
3
500
55
5
8
31
1.52
26882069--26882102
9
3.8
9
88
0
50
50
23
2
23
1.63
26899843--26900061
109
2.0
109
91
3
352
33
13
17
35
1.89
26906529--26906572
12
3.5
12
79
11
52
61
0
2
36
1.09
26906719--26906759
21
1.9
22
90
5
66
43
4
0
51
1.23
26907837--26907867
15
2.1
15
93
0
53
35
0
0
64
0.94
26908202--26908275
36
2.1
35
87
10
105
24
20
24
31
1.98
26908241--26908401
61
2.8
57
87
7
250
22
16
25
35
1.95
26916887--26917098
48
4.3
50
75
11
170
26
15
5
52
1.65
26927129--26927256
68
1.9
68
90
0
202
23
0
23
52
1.52
26931364--26931427
32
2.0
31
90
3
101
59
0
9
31
1.29
26931491--26931555
34
1.9
34
81
12
80
40
9
12
38
1.75
26931602--26931702
34
3.0
34
69
16
91
39
8
3
47
1.53
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26931687--26931761
35
2.2
34
85
2
96
48
10
4
37
1.57
26933025--26933097
10
7.5
10
77
11
80
58
5
1
34
1.29
26933033--26933077
18
2.4
19
88
7
65
62
6
2
28
1.33
26933025--26933097
29
2.6
29
85
10
105
58
5
1
34
1.29
26933130--26933183
28
1.9
28
81
7
65
61
3
1
33
1.25
26933033--26933170
20
7.3
19
66
17
72
59
7
0
31
1.31
26933256--26933302
10
4.6
10
82
10
60
61
8
2
27
1.36
26933256--26933346
31
3.0
31
81
12
91
60
4
3
31
1.33
26933298--26933329
12
2.7
12
95
0
55
65
0
3
31
1.08
26933322--26933357
17
2.2
17
90
5
56
66
0
5
27
1.13
26933597--26933643
11
4.5
11
76
15
55
44
0
2
53
1.12
26933601--26933652
19
2.7
19
84
0
68
44
0
1
53
1.11
26933738--26933793
20
2.8
20
80
0
67
37
3
5
53
1.41
26933790--26933833
19
2.4
17
78
14
52
29
0
4
65
1.12
26933820--26933875
21
2.6
22
77
11
62
30
0
5
64
1.16
26933799--26933882
19
4.2
19
73
16
71
29
0
7
63
1.21
26934733--26934757
12
2.1
12
100
0
50
64
0
8
28
1.22
26945306--26945330
2
12.5
2
100
0
50
52
0
0
48
1.00
26950989--26951042
25
2.1
26
93
3
92
35
5
24
35
1.79
26953032--26953104
11
6.8
11
68
22
57
61
8
1
28
1.33
26953032--26953104
31
2.3
32
85
4
94
61
8
1
28
1.33
26966149--26966194
20
2.3
20
88
0
65
43
17
15
23
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26967939--26967979
3
13.7
3
100
0
82
68
0
0
31
0.90
26969520--26969556
19
1.9
19
94
0
65
43
5
2
48
1.40
26970517--26970565
19
2.6
19
79
17
57
63
0
0
36
0.95
26973589--26973621
17
1.9
17
88
11
50
33
0
18
48
1.48
26988642--26988719
22
3.2
25
77
17
76
46
0
5
48
1.24
26994891--26994983
30
3.1
30
81
9
118
41
1
3
53
1.24
26994986--26995036
23
2.3
23
83
6
70
50
0
5
43
1.26
26995034--26995074
20
2.0
21
85
4
57
56
2
0
41
1.13
26995633--26995673
12
3.3
12
90
10
57
31
0
2
65
1.05
26996784--26996826
21
2.0
21
86
0
59
27
2
4
65
1.25

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190