Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168048.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_3, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33276047

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   

This is table  188  of  190  ( 22769 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32725944--32726002
12
4.8
12
77
8
57
76
8
3
11
1.13
32725944--32725989
13
3.5
13
79
8
58
78
6
2
13
1.04
32725934--32726000
25
2.6
24
77
11
71
77
7
5
8
1.12
32725934--32726002
24
2.8
25
82
4
79
76
7
5
10
1.14
32726238--32726268
16
2.0
15
93
6
53
0
45
0
54
0.99
32726448--32726475
12
2.3
12
100
0
56
57
7
0
35
1.26
32727716--32727783
30
2.3
29
82
7
84
64
0
5
29
1.17
32728802--32728840
20
2.0
20
84
0
51
43
2
0
53
1.14
32729285--32729322
15
2.7
14
84
8
51
39
0
0
60
0.97
32731715--32731773
22
2.5
22
81
8
64
59
1
6
32
1.34
32738633--32738688
25
2.2
26
81
9
62
41
1
5
51
1.35
32743672--32743703
14
2.3
14
94
0
55
50
9
0
40
1.35
32743666--32743705
20
2.0
20
95
0
71
47
10
2
40
1.50
32744974--32745005
16
1.9
17
93
6
57
68
0
0
31
0.90
32744973--32745005
11
3.1
11
91
4
50
69
0
0
30
0.88
32744976--32745038
21
2.9
21
77
15
58
66
1
3
28
1.16
32752067--32752122
25
2.2
25
78
9
60
62
1
0
35
1.06
32752081--32752130
22
2.2
22
86
10
66
64
0
0
36
0.94
32754796--32754910
60
1.9
60
85
1
158
43
1
13
41
1.53
32754855--32754904
25
2.0
26
81
18
61
44
2
12
42
1.53
32754803--32754930
60
2.1
61
80
2
150
46
3
12
38
1.58
32754946--32755023
37
2.1
37
83
4
95
43
2
12
41
1.56
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32754994--32755113
51
2.3
53
81
4
127
48
2
11
37
1.53
32756237--32756263
3
9.0
3
100
0
54
66
0
0
33
0.92
32756669--32756697
12
2.3
13
94
5
51
41
6
20
31
1.79
32757119--32757185
31
2.2
30
89
5
107
52
5
7
34
1.54
32757130--32757185
15
3.6
16
71
7
53
50
5
7
37
1.53
32764605--32764629
2
12.5
2
100
0
50
52
0
0
48
1.00
32764750--32764806
24
2.4
25
77
11
66
33
1
1
63
1.15
32764947--32764977
3
10.0
3
93
6
53
32
0
3
64
1.09
32773191--32773223
16
2.1
16
94
0
57
6
39
3
51
1.42
32778774--32778806
2
17.0
2
87
6
50
51
3
0
45
1.16
32784499--32784654
78
2.0
78
93
0
267
32
23
14
30
1.94
32785386--32785432
18
2.7
17
77
6
58
38
0
4
57
1.18
32787764--32787803
21
1.9
21
84
0
53
60
2
2
35
1.24
32788008--32788034
13
2.1
13
100
0
54
29
29
18
22
1.97
32804771--32804807
13
3.0
13
88
7
51
70
0
0
29
0.88
32804771--32804813
11
3.7
12
82
11
54
67
0
0
32
0.91
32806260--32806311
21
2.5
22
93
6
90
48
0
0
51
1.00
32806284--32806340
30
1.9
30
85
0
78
52
1
0
45
1.11
32811216--32811244
15
1.9
15
100
0
58
41
17
6
34
1.76
32816693--32817328
159
4.0
159
93
3
1061
28
14
17
38
1.90
32819283--32819311
15
1.9
15
100
0
58
41
17
6
34
1.76
32824068--32824134
12
5.6
12
78
15
68
67
1
2
28
1.14
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32824057--32824124
18
3.6
18
76
9
64
64
2
2
29
1.22
32824219--32824289
32
2.2
32
85
2
90
53
1
0
45
1.09
32824795--32824821
11
2.5
11
100
0
54
48
0
25
25
1.52
32835291--32835320
2
15.0
2
92
0
51
46
0
3
50
1.18
32837059--32837128
21
3.3
21
76
11
81
8
21
14
55
1.65
32838428--32838455
14
2.0
14
100
0
56
50
0
0
50
1.00
32838674--32838726
16
3.3
16
82
12
56
24
1
7
66
1.28
32838692--32838726
15
2.2
17
90
10
56
22
2
5
68
1.24
32838759--32838800
10
3.4
13
78
21
54
57
0
0
42
0.99
32842758--32842798
6
6.8
6
88
0
55
68
9
21
0
1.18
32846016--32846087
34
2.2
32
80
7
81
45
0
2
51
1.15
32846022--32846090
33
2.1
33
86
2
93
44
0
2
52
1.16
32846895--32846926
13
2.5
13
89
0
55
62
0
6
31
1.20
32854294--32854341
14
3.3
14
77
11
51
29
18
18
33
1.95
32854535--32854593
31
1.9
31
86
6
84
44
16
28
10
1.81
32869460--32869496
2
18.5
2
100
0
74
51
0
48
0
1.00
32870836--32870860
13
1.9
13
100
0
50
48
0
16
36
1.46
32877638--32877687
22
2.2
22
79
13
57
32
4
0
64
1.12
32877635--32877690
21
2.7
20
79
15
60
35
3
0
60
1.14
32877664--32877708
21
2.1
21
83
0
54
33
2
2
62
1.20
32877730--32877775
13
3.5
13
77
11
58
34
4
4
56
1.39
32877724--32877795
26
2.9
25
82
10
78
40
2
2
54
1.29
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32877732--32877795
23
2.6
25
85
7
78
40
3
3
53
1.33
32889945--32889976
9
3.6
9
91
0
55
0
18
34
46
1.49
32891486--32891543
30
1.9
30
92
0
98
32
3
15
48
1.62
32892559--32892625
32
2.1
32
85
0
89
53
1
0
44
1.09
32892558--32892633
39
1.9
38
84
10
100
52
2
0
44
1.14
32894934--32894992
19
3.0
19
76
18
59
40
0
0
59
0.97
32902386--32902464
40
2.0
40
92
0
131
22
10
20
46
1.80
32905364--32905394
16
2.0
16
93
6
55
38
0
0
61
0.96
32907304--32907546
119
2.0
119
98
1
470
44
6
2
46
1.44
32907564--32907597
17
2.0
17
100
0
68
47
17
11
23
1.81
32907960--32908038
38
2.1
38
88
4
115
30
21
18
29
1.97
32913084--32913126
21
2.2
20
87
8
61
44
0
2
53
1.13
32913200--32913308
17
6.1
17
67
19
53
45
0
1
51
1.18
32913524--32913786
89
2.9
90
86
7
342
27
13
22
36
1.92
32913531--32913788
44
5.8
45
90
4
341
27
13
22
36
1.92
32915251--32915277
6
4.5
6
100
0
54
85
0
0
14
0.61
32915256--32915328
12
5.8
12
77
17
51
79
8
1
10
0.99
32915909--32915949
8
5.0
8
82
5
55
41
0
0
58
0.98
32915890--32915949
25
2.4
25
81
8
70
40
0
0
60
0.97
32915940--32915989
20
2.5
20
90
6
75
52
0
0
48
1.00
32916578--32916610
17
1.9
17
93
0
57
18
18
0
63
1.31
32916708--32916784
28
2.8
28
95
0
136
38
2
9
49
1.48
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32922388--32922412
4
6.2
4
100
0
50
52
0
0
48
1.00
32924721--32924771
21
2.3
23
86
6
70
37
3
0
58
1.16
32926057--32926090
14
2.3
15
90
5
52
58
2
0
38
1.13
32926395--32926459
11
6.2
11
73
21
50
38
0
0
61
0.96
32927062--32927113
18
2.9
18
88
0
77
32
17
26
23
1.96
32930443--32930480
4
9.5
4
94
0
67
50
0
2
47
1.15
32930580--32930928
41
8.4
42
89
2
490
36
20
16
26
1.94
32932181--32932229
23
2.1
24
84
3
64
10
16
0
73
1.09
32936146--32936429
59
4.7
59
80
8
295
32
13
7
46
1.72
32936465--32936524
21
2.9
22
85
14
83
75
3
8
13
1.16
32936553--32936604
4
12.8
4
76
11
52
76
3
0
19
0.93
32936553--32936593
17
2.4
18
84
12
59
75
4
0
19
0.98
32936560--32936601
17
2.5
16
85
11
57
78
4
0
16
0.91
32937445--32937493
16
2.8
17
84
12
64
65
4
6
24
1.33
32937556--32937590
14
2.3
16
90
9
56
62
2
0
34
1.10
32937611--32937642
5
6.6
5
92
7
57
81
0
0
18
0.70
32937611--32937654
15
3.2
14
84
12
56
77
0
2
20
0.88
32938277--32938320
8
5.8
8
81
7
56
40
0
0
59
0.98
32938280--32938337
14
3.9
15
80
11
57
44
0
0
55
0.99
32938307--32938356
20
2.6
19
90
6
82
48
0
0
52
1.00
32939165--32939269
28
3.8
28
97
0
192
36
2
12
48
1.56
32945271--32945303
16
2.0
17
94
5
59
48
0
0
51
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32945287--32945356
31
2.5
26
77
13
68
44
1
1
52
1.18
32945302--32945382
24
3.2
26
79
13
89
46
1
1
50
1.17
32950771--32950825
25
2.2
25
96
0
101
56
0
25
18
1.42
32951648--32951694
25
1.9
25
91
4
78
57
2
2
38
1.23
32953228--32953272
23
2.0
23
82
8
56
31
6
2
60
1.35
32957397--32957434
2
19.0
2
94
0
67
52
0
47
0
1.00
32958182--32958257
22
3.4
21
78
10
62
34
5
2
57
1.35
32959572--32959596
12
2.1
12
100
0
50
36
8
8
48
1.62
32959671--32959714
2
22.5
2
95
4
81
52
0
47
0
1.00
32960636--32960696
24
2.6
24
77
12
72
42
0
1
55
1.09

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190