Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite: G. Benson, "Tandem repeats finder: a program to analyze DNA sequences" Nucleic Acid Research(1999) Vol. 27, No. 2, pp. 573-580. Sequence: Gbar_D11 Parameters: 2 7 7 80 10 50 1000 Length: 68311261

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   

This is table  129  of  226  ( 27070 repeats found )
Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40024919--40024977
23
2.5
25
75
10
70
52
8
6
32
1.58
40026762--40026918
44
3.6
45
77
6
142
26
25
20
28
1.99
40026725--40027190
44
10.7
44
68
11
129
28
24
18
29
1.98
40026767--40027189
173
2.4
173
85
3
514
28
24
18
28
1.98
40026725--40027132
217
1.9
217
84
4
511
28
24
19
28
1.98
40027187--40027614
128
3.3
128
93
1
732
24
24
19
31
1.98
40028730--40028942
41
5.2
41
83
2
221
23
20
24
32
1.98
40033612--40033671
18
3.4
18
64
13
52
43
6
10
40
1.64
40033879--40033963
43
2.0
44
90
2
136
22
16
30
30
1.96
40034467--40034514
7
7.0
7
95
4
89
14
14
0
70
1.16
40048199--40048290
25
3.7
25
78
11
91
29
23
22
23
1.99
40051822--40051860
20
2.0
20
84
0
51
20
0
23
56
1.42
40052960--40052997
19
2.0
19
89
0
58
63
13
2
21
1.42
40053183--40053225
22
2.0
22
90
0
68
32
18
16
32
1.93
40057837--40057878
11
4.0
11
84
6
52
35
0
0
64
0.94
40064958--40065552
27
22.1
27
81
5
476
36
20
20
22
1.95
40065623--40065674
24
2.2
24
89
6
79
19
7
25
48
1.75
40065739--40065802
27
2.4
27
80
12
71
23
25
23
28
2.00
40065800--40065855
26
2.2
26
83
0
67
14
21
30
33
1.93
40065846--40066060
32
6.7
32
80
5
204
20
19
22
38
1.93
40065843--40066066
64
3.5
64
82
6
274
20
19
21
38
1.94
40074496--40074680
79
2.3
81
83
7
227
24
22
27
24
2.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40074497--40074680
40
4.6
40
82
9
207
25
22
27
24
2.00
40074549--40074713
79
2.1
79
83
6
201
26
21
27
24
1.99
40082415--40082598
40
4.6
39
81
6
201
25
22
28
24
1.99
40082415--40082598
79
2.3
81
82
7
216
25
22
28
24
1.99
40082467--40082631
79
2.1
79
82
6
192
26
20
27
24
1.99
40087462--40087512
25
2.1
24
85
3
66
11
9
0
78
0.97
40097477--40097534
30
1.9
30
85
0
80
39
0
27
32
1.57
40097872--40098111
50
4.7
50
78
6
198
29
21
27
22
1.99
40108363--40108828
225
2.1
224
94
2
819
42
18
13
26
1.86
40109050--40109111
20
3.1
20
73
17
65
32
20
38
8
1.82
40109041--40109198
40
4.0
40
70
12
110
32
17
31
17
1.94
40115224--40115341
47
2.5
46
83
4
157
28
11
27
31
1.92
40116851--40116888
18
2.1
18
95
0
67
34
5
26
34
1.79
40120762--40120890
53
2.6
50
82
7
129
27
15
26
31
1.96
40121230--40121302
20
3.7
20
75
0
83
36
17
20
24
1.94
40121229--40121305
40
1.9
40
89
0
118
37
18
19
24
1.94
40128834--40128864
15
2.1
15
93
0
53
19
0
3
77
0.90
40133330--40133514
101
1.8
102
90
3
302
24
18
27
30
1.98
40133327--40133512
51
3.7
49
80
5
203
24
18
27
30
1.98
40133518--40133616
46
2.2
43
79
12
101
25
18
24
32
1.97
40135682--40135737
22
2.6
23
88
5
64
37
8
7
46
1.63
40140935--40143614
47
54.6
47
87
8
3702
32
8
29
30
1.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40140935--40143614
96
27.3
94
90
7
4014
32
8
29
30
1.86
40141311--40141633
60
5.0
60
72
21
287
32
7
29
30
1.85
40142001--40142322
60
5.0
60
71
21
278
32
7
29
31
1.84
40145877--40146152
40
6.9
40
90
0
419
25
21
27
25
1.99
40149458--40149908
47
9.6
47
95
0
776
32
8
29
29
1.87
40159459--40159601
50
2.8
51
86
5
209
23
14
30
32
1.94
40162900--40163031
38
3.4
38
90
3
203
16
34
17
31
1.92
40162902--40163003
20
5.3
20
66
17
81
14
37
18
29
1.91
40165435--40165532
49
2.0
49
95
0
178
42
10
10
36
1.73
40169468--40169746
39
7.2
39
84
1
321
16
32
17
33
1.93
40169528--40169630
19
5.3
19
65
13
57
15
35
15
33
1.89
40169468--40169778
39
8.1
38
82
2
316
16
31
17
33
1.93
40178662--40178845
45
4.1
45
88
4
257
34
26
16
22
1.95
40186550--40186591
22
1.9
22
85
9
59
9
19
23
47
1.78
40186655--40186906
43
5.9
43
83
2
292
30
29
17
22
1.96
40187814--40188331
23
22.7
23
70
12
280
40
23
5
30
1.77
40187934--40188328
114
3.5
114
92
1
650
40
23
5
30
1.77
40187808--40188112
137
2.2
137
89
1
459
40
22
5
31
1.76
40187808--40188252
137
3.2
137
81
7
413
40
22
5
31
1.76
40192968--40193211
41
6.0
41
88
0
337
31
25
20
22
1.98
40196925--40197226
41
7.4
41
77
7
301
35
15
28
20
1.93
40196934--40196997
21
3.1
21
69
13
60
37
15
28
18
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40198626--40198731
53
2.0
53
96
0
194
28
22
21
27
1.99
40199923--40200014
27
3.4
26
79
10
87
23
25
13
38
1.91
40209481--40209577
48
2.0
48
91
0
158
57
22
8
11
1.60
40257290--40257376
26
3.3
26
77
3
95
42
24
17
16
1.88
40257290--40257389
52
1.9
52
87
4
148
43
24
17
16
1.88
40257594--40257857
27
9.8
27
77
9
245
23
15
20
39
1.91
40257593--40257865
54
5.1
53
81
5
298
23
15
21
39
1.92
40257594--40257858
81
3.3
81
84
3
311
23
15
20
39
1.91
40257606--40257911
54
5.7
52
80
6
238
22
16
20
40
1.91
40257661--40257912
81
3.1
77
80
8
245
21
16
21
40
1.91
40257634--40257934
27
11.1
27
74
8
83
20
15
21
41
1.90
40260585--40260778
50
3.9
50
85
2
237
22
28
20
28
1.98
40264536--40264778
50
4.8
50
83
2
272
21
31
20
26
1.98
40266777--40266997
117
1.9
119
83
5
297
24
28
22
24
2.00
40266775--40266997
40
5.7
39
84
6
272
25
28
21
24
1.99
40274330--40274551
118
1.9
119
84
6
299
25
27
22
24
2.00
40274328--40274551
40
5.7
40
85
7
287
25
27
22
24
2.00
40277676--40278032
27
13.2
27
79
6
310
39
19
15
24
1.92
40277676--40278022
81
4.3
80
79
5
360
39
20
15
24
1.91
40277676--40278032
54
6.6
54
79
3
351
39
19
15
24
1.92
40278159--40278216
27
2.2
26
87
9
82
18
25
22
32
1.97
40297718--40297826
27
4.1
27
78
2
103
18
15
21
44
1.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40302767--40302813
19
2.5
18
80
10
58
12
8
6
72
1.27
40304038--40304080
17
2.4
18
92
3
70
16
4
4
74
1.16
40307268--40307345
41
1.9
41
89
5
122
25
23
21
29
1.99
40308991--40309242
43
5.9
43
86
0
333
26
29
18
25
1.98
40309331--40309364
16
2.1
16
94
0
59
64
0
0
35
0.94
40309319--40309360
22
1.9
22
85
9
59
69
0
0
30
0.89
40310716--40310829
40
2.9
41
76
3
108
36
19
22
21
1.95
40310888--40311163
41
6.8
41
84
2
340
19
19
28
33
1.96
40314965--40315942
47
20.5
47
93
2
1591
33
8
28
29
1.87
40314965--40315942
96
10.3
94
93
2
1546
33
8
28
29
1.87
40314965--40315942
335
2.9
335
97
1
1815
33
8
28
29
1.87
40317638--40317677
15
2.8
14
85
7
53
30
0
22
47
1.52
40318140--40318179
20
2.0
21
90
5
64
27
45
0
27
1.54
40322343--40322408
35
1.9
34
84
9
89
37
3
1
57
1.23
40325275--40325318
22
1.9
24
86
9
65
40
2
36
20
1.65
40326144--40326175
7
4.6
7
96
0
55
31
50
0
18
1.48
40326134--40326181
14
3.4
14
82
0
51
33
43
0
22
1.54
40326186--40326313
66
1.9
70
87
9
194
48
21
0
28
1.56
40326828--40326976
41
3.7
40
81
7
174
29
30
20
20
1.97
40327163--40327221
3
19.7
3
89
0
91
3
28
1
66
1.18
40327170--40327221
18
2.9
18
100
0
104
3
28
0
67
1.08
40333862--40333903
12
3.5
12
93
0
75
26
38
26
9
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40337775--40338027
110
2.3
111
84
2
321
28
17
22
32
1.96
40337775--40338098
110
2.9
110
80
3
303
27
18
21
32
1.96
40343435--40343480
6
7.5
6
84
15
51
78
0
6
15
0.95
40352516--40352559
6
7.8
6
95
5
67
18
27
0
54
1.44
40352552--40352632
20
3.7
22
72
16
71
29
11
0
59
1.32
40352583--40352632
23
2.2
23
82
7
57
28
12
0
60
1.32
40352845--40352887
21
2.0
21
86
8
61
34
6
0
58
1.25
40353128--40353384
27
10.3
26
69
23
164
24
12
0
61
1.36
40353112--40353353
48
5.0
48
85
8
330
24
12
0
62
1.33
40353201--40353249
20
2.4
21
87
12
68
24
8
0
67
1.18

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226